Bo5g010600 (Brassica oleracea)
NFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01422 (zf-NF-X1) IPR000967 Bo5g010600 T300380_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g010600.1 NFX 266 283
Bo5g010600.1 NFX 321 339
Bo5g010600.1 NFX 385 403
Bo5g010600.1 NFX 444 462
Bo5g010600.1 NFX 503 514
Bo5g010600.1 NFX 542 560
Bo5g010600.1 NFX 599 616
Bo5g010600.1 NFX 652 669
Bo5g010600.1 NFX 679 711

Links

Other NFX family TFs
Other Brassica oleracea TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra019958 Brassica rapa Bra019958 N 1.000
ATNFXL1 Arabidopsis thaliana AT1G10170 N 0.944
ATNFXL1 Arabidopsis lyrata fgenesh2_kg.1__1086__AT1G10170.1 N 0.938
Cagra.1508s0074 Capsella grandiflora Cagra.1508s0074 N 0.875
Carubv10008145m.g Capsella rubella Carubv10008145m.g N 0.875
Bra031704 Brassica rapa Bra031704 N 0.870
cassava4965.m1 Manihot esculenta cassava4965.m1 N 0.869
fgenesh1_pg.C_scaffold_1003098 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1003098 N 0.850
Bra018458 Brassica rapa Bra018458 N 0.844
Ciclev10018607m.g Citrus clementina Ciclev10018607m.g N 0.840
orange1.1g001378m.g Citrus sinensis orange1.1g001378m.g N 0.840
POPTR_0012s04070 Populus trichocarpa POPTR_0012s04070 N 0.838
Lus10034470.g Linum usitatissimum Lus10034470.g N 0.838
Bo8g059130 Brassica oleracea Bo8g059130 N 0.838
Lus10025071.g Linum usitatissimum Lus10025071.g N 0.831
Cucsa.122080 Cucumis sativus Cucsa.122080 N 0.831
Gorai.006G058600 Gossypium raimondii Gorai.006G058600 N 0.824
TCM_012484 Theobroma cacao TCM_012484 N 0.819
Eucgr.H00552 Eucalyptus grandis Eucgr.H00552 N 0.819
Aquca_032_00102 Aquilegia coerulea Aquca_032_00102 N 0.812
Aquca_044_00077 Aquilegia coerulea Aquca_044_00077 N 0.812
TCM_017029 Theobroma cacao TCM_017029 N 0.806
GLYMA09G30343 Glycine max GLYMA09G30343 N 0.806
PK00983.1 Cannabis sativa PK00983.1 N 0.800
Cla018720 Citrullus lanatus Cla018720 N 0.794
GLYMA08G06040 Glycine max GLYMA08G06040 N 0.794
GLYMA07G11834 Glycine max GLYMA07G11834 N 0.794
Eucgr.K02284 Eucalyptus grandis Eucgr.K02284 N 0.790
MDP0000280911 Malus domestica MDP0000280911 N 0.769
PRUPE_ppa000543mg Prunus persica PRUPE_ppa000543mg N 0.762
Pm025049 Prunus mume Pm025049 N 0.756
GRMZM2G087787 Zea mays GRMZM2G087787 N 0.756
Sb10g009070 Sorghum bicolor Sb10g009070 N 0.750
Sb04g038100 Sorghum bicolor Sb04g038100 N 0.744
27791.m000083 Ricinus communis 27791.m000083 N 0.738
SapurV1A.0082s0290 Salix purpurea SapurV1A.0082s0290 N 0.731
Bostr.13671s0471 Boechera stricta Bostr.13671s0471 N 0.719
Thhalv10006708m.g Eutrema salsugineum Thhalv10006708m.g N 0.713
Ca_16794 Cicer arietinum Ca_16794 N 0.700
POPTR_0015s05030 Populus trichocarpa POPTR_0015s05030 N 0.700