TCM_017029 (Theobroma cacao)
NFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01422 (zf-NF-X1) IPR000967 TCM_017029 T300825_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY02599 NFX 225 242
EOY02599 NFX 280 298
EOY02599 NFX 344 362
EOY02599 NFX 402 420
EOY02599 NFX 460 471
EOY02599 NFX 498 515
EOY02599 NFX 555 572
EOY02599 NFX 608 627
EOY02599 NFX 636 667
EOY02600 NFX 225 242
EOY02600 NFX 280 298
EOY02600 NFX 344 362
EOY02600 NFX 402 420
EOY02600 NFX 460 471
EOY02600 NFX 498 515
EOY02600 NFX 555 572
EOY02600 NFX 608 627
EOY02600 NFX 636 667
EOY02601 NFX 225 242
EOY02601 NFX 280 298
EOY02601 NFX 344 362
EOY02601 NFX 402 420
EOY02601 NFX 460 471
EOY02601 NFX 498 515
EOY02601 NFX 555 572
EOY02601 NFX 608 627
EOY02601 NFX 636 667
EOY02602 NFX 225 242
EOY02602 NFX 280 298
EOY02602 NFX 344 362
EOY02602 NFX 402 420
EOY02602 NFX 460 471
EOY02602 NFX 498 515
EOY02602 NFX 555 572
EOY02602 NFX 608 627
EOY02602 NFX 636 667

Links

Other NFX family TFs
Other Theobroma cacao TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_012484 Theobroma cacao TCM_012484 N 0.950
Gorai.006G058600 Gossypium raimondii Gorai.006G058600 N 0.906
cassava4965.m1 Manihot esculenta cassava4965.m1 N 0.848
POPTR_0012s04070 Populus trichocarpa POPTR_0012s04070 N 0.844
Eucgr.H00552 Eucalyptus grandis Eucgr.H00552 N 0.835
GLYMA09G30343 Glycine max GLYMA09G30343 N 0.835
Lus10034470.g Linum usitatissimum Lus10034470.g N 0.829
Cucsa.122080 Cucumis sativus Cucsa.122080 N 0.829
ATNFXL1 Arabidopsis thaliana AT1G10170 N 0.823
PK00983.1 Cannabis sativa PK00983.1 N 0.819
GLYMA08G06040 Glycine max GLYMA08G06040 N 0.816
orange1.1g001378m.g Citrus sinensis orange1.1g001378m.g N 0.815
Ciclev10018607m.g Citrus clementina Ciclev10018607m.g N 0.815
Lus10025071.g Linum usitatissimum Lus10025071.g N 0.812
GLYMA07G11834 Glycine max GLYMA07G11834 N 0.812
Aquca_032_00102 Aquilegia coerulea Aquca_032_00102 N 0.810
Bo5g010600 Brassica oleracea Bo5g010600 N 0.806
Bra019958 Brassica rapa Bra019958 N 0.806
Aquca_044_00077 Aquilegia coerulea Aquca_044_00077 N 0.804
Eucgr.K02284 Eucalyptus grandis Eucgr.K02284 N 0.802
ATNFXL1 Arabidopsis lyrata fgenesh2_kg.1__1086__AT1G10170.1 N 0.800
Cagra.1508s0074 Capsella grandiflora Cagra.1508s0074 N 0.791
Carubv10008145m.g Capsella rubella Carubv10008145m.g N 0.791
Cla018720 Citrullus lanatus Cla018720 N 0.785
fgenesh1_pg.C_scaffold_1003098 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1003098 N 0.769
Sb04g038100 Sorghum bicolor Sb04g038100 N 0.759
GRMZM2G087787 Zea mays GRMZM2G087787 N 0.759
Bra031704 Brassica rapa Bra031704 N 0.758
MDP0000280911 Malus domestica MDP0000280911 N 0.753
Bo8g059130 Brassica oleracea Bo8g059130 N 0.747
SapurV1A.0082s0290 Salix purpurea SapurV1A.0082s0290 N 0.747
PRUPE_ppa000543mg Prunus persica PRUPE_ppa000543mg N 0.747
Pm025049 Prunus mume Pm025049 N 0.747
Sb10g009070 Sorghum bicolor Sb10g009070 N 0.744
27791.m000083 Ricinus communis 27791.m000083 N 0.741
Bra018458 Brassica rapa Bra018458 N 0.734
POPTR_0015s05030 Populus trichocarpa POPTR_0015s05030 N 0.722
Ca_16794 Cicer arietinum Ca_16794 N 0.715