Cagra.1508s0074 (Capsella grandiflora)
NFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01422 (zf-NF-X1) IPR000967 Cagra.1508s0074 T300958_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1508s0074.1.p NFX 266 283
Cagra.1508s0074.1.p NFX 321 339
Cagra.1508s0074.1.p NFX 385 403
Cagra.1508s0074.1.p NFX 443 461
Cagra.1508s0074.1.p NFX 501 512
Cagra.1508s0074.1.p NFX 541 559
Cagra.1508s0074.1.p NFX 598 615
Cagra.1508s0074.1.p NFX 651 667
Cagra.1508s0074.1.p NFX 680 711

Links

Other NFX family TFs
Other Capsella grandiflora TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10008145m.g Capsella rubella Carubv10008145m.g N 1.000
fgenesh1_pg.C_scaffold_1003098 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1003098 N 0.944
ATNFXL1 Arabidopsis thaliana AT1G10170 N 0.894
ATNFXL1 Arabidopsis lyrata fgenesh2_kg.1__1086__AT1G10170.1 N 0.881
Bra019958 Brassica rapa Bra019958 N 0.875
Bo5g010600 Brassica oleracea Bo5g010600 N 0.875
cassava4965.m1 Manihot esculenta cassava4965.m1 N 0.844
Bra031704 Brassica rapa Bra031704 N 0.820
Lus10034470.g Linum usitatissimum Lus10034470.g N 0.819
Ciclev10018607m.g Citrus clementina Ciclev10018607m.g N 0.815
orange1.1g001378m.g Citrus sinensis orange1.1g001378m.g N 0.815
Lus10025071.g Linum usitatissimum Lus10025071.g N 0.812
POPTR_0012s04070 Populus trichocarpa POPTR_0012s04070 N 0.812
Cucsa.122080 Cucumis sativus Cucsa.122080 N 0.806
Aquca_044_00077 Aquilegia coerulea Aquca_044_00077 N 0.806
Eucgr.H00552 Eucalyptus grandis Eucgr.H00552 N 0.806
Gorai.006G058600 Gossypium raimondii Gorai.006G058600 N 0.805
Aquca_032_00102 Aquilegia coerulea Aquca_032_00102 N 0.800
TCM_012484 Theobroma cacao TCM_012484 N 0.794
TCM_017029 Theobroma cacao TCM_017029 N 0.791
GLYMA09G30343 Glycine max GLYMA09G30343 N 0.787
Bo8g059130 Brassica oleracea Bo8g059130 N 0.781
GLYMA07G11834 Glycine max GLYMA07G11834 N 0.781
GLYMA08G06040 Glycine max GLYMA08G06040 N 0.781
PK00983.1 Cannabis sativa PK00983.1 N 0.775
Eucgr.K02284 Eucalyptus grandis Eucgr.K02284 N 0.772
Bra018458 Brassica rapa Bra018458 N 0.769
Cla018720 Citrullus lanatus Cla018720 N 0.762
GRMZM2G087787 Zea mays GRMZM2G087787 N 0.762
Sb10g009070 Sorghum bicolor Sb10g009070 N 0.756
Sb04g038100 Sorghum bicolor Sb04g038100 N 0.750
Pm025049 Prunus mume Pm025049 N 0.731
PRUPE_ppa000543mg Prunus persica PRUPE_ppa000543mg N 0.725
SapurV1A.0082s0290 Salix purpurea SapurV1A.0082s0290 N 0.719
MDP0000280911 Malus domestica MDP0000280911 N 0.719
Bostr.15697s0430 Boechera stricta Bostr.15697s0430 N 0.719
27791.m000083 Ricinus communis 27791.m000083 N 0.713