CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK00983.1
(
Cannabis sativa
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01422 (zf-NF-X1)
IPR000967
PK00983.1
T301004_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK00983.1
NFX
430
447
CPHVCVLQCHPGPCPPCK
PK00983.1
NFX
485
503
CGRHRCEQMCHVGPCDQCE
PK00983.1
NFX
549
567
CGNHFCGEICHPGTCGECE
PK00983.1
NFX
607
625
CKKHSCEEVCHAGDCPPCL
PK00983.1
NFX
664
675
CGRHRCNERCCP
PK00983.1
NFX
702
720
CGQHACESLCHSGHCPPCL
PK00983.1
NFX
757
776
QPCGHSASHSCHFGDCPPCS
PK00983.1
NFX
812
830
CGMHACGRICHLPPCDSQM
PK00983.1
NFX
840
871
CGQTCGAPRRDCRHTCTAPCHPSSLCPDTRCD
Links
Other
NFX
family TFs
Other
Cannabis sativa
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_012484
Theobroma cacao
TCM_012484
N
0.838
GLYMA09G30343
Glycine max
GLYMA09G30343
N
0.831
GLYMA08G06040
Glycine max
GLYMA08G06040
N
0.831
cassava4965.m1
Manihot esculenta
cassava4965.m1
N
0.831
Gorai.006G058600
Gossypium raimondii
Gorai.006G058600
N
0.830
orange1.1g001378m.g
Citrus sinensis
orange1.1g001378m.g
N
0.827
Ciclev10018607m.g
Citrus clementina
Ciclev10018607m.g
N
0.827
GLYMA07G11834
Glycine max
GLYMA07G11834
N
0.825
POPTR_0012s04070
Populus trichocarpa
POPTR_0012s04070
N
0.825
TCM_017029
Theobroma cacao
TCM_017029
N
0.819
Lus10034470.g
Linum usitatissimum
Lus10034470.g
N
0.812
Eucgr.H00552
Eucalyptus grandis
Eucgr.H00552
N
0.806
ATNFXL1
Arabidopsis thaliana
AT1G10170
N
0.806
Cucsa.122080
Cucumis sativus
Cucsa.122080
N
0.806
Eucgr.K02284
Eucalyptus grandis
Eucgr.K02284
N
0.806
Lus10025071.g
Linum usitatissimum
Lus10025071.g
N
0.806
Bo5g010600
Brassica oleracea
Bo5g010600
N
0.800
Aquca_044_00077
Aquilegia coerulea
Aquca_044_00077
N
0.800
Aquca_032_00102
Aquilegia coerulea
Aquca_032_00102
N
0.800
Bra019958
Brassica rapa
Bra019958
N
0.800
ATNFXL1
Arabidopsis lyrata
fgenesh2_kg.1__1086__AT1G10170.1
N
0.794
GRMZM2G087787
Zea mays
GRMZM2G087787
N
0.781
Sb10g009070
Sorghum bicolor
Sb10g009070
N
0.781
Sb04g038100
Sorghum bicolor
Sb04g038100
N
0.775
fgenesh1_pg.C_scaffold_1003098
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1003098
N
0.775
Cagra.1508s0074
Capsella grandiflora
Cagra.1508s0074
N
0.775
Carubv10008145m.g
Capsella rubella
Carubv10008145m.g
N
0.775
Cla018720
Citrullus lanatus
Cla018720
N
0.762
Pm025049
Prunus mume
Pm025049
N
0.744
PRUPE_ppa000543mg
Prunus persica
PRUPE_ppa000543mg
N
0.744
Bra031704
Brassica rapa
Bra031704
N
0.739
SapurV1A.0082s0290
Salix purpurea
SapurV1A.0082s0290
N
0.731
27791.m000083
Ricinus communis
27791.m000083
N
0.731
MDP0000280911
Malus domestica
MDP0000280911
N
0.725
Bo8g059130
Brassica oleracea
Bo8g059130
N
0.725
Bra018458
Brassica rapa
Bra018458
N
0.713
Ca_16794
Cicer arietinum
Ca_16794
N
0.706