cassava4965.m1 (Manihot esculenta)
NFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01422 (zf-NF-X1) IPR000967 cassava4965.m1 T300922_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava4965.m1 NFX 107 124
cassava4965.m1 NFX 152 180
cassava4965.m1 NFX 226 244
cassava4965.m1 NFX 278 302
cassava4965.m1 NFX 342 353
cassava4965.m1 NFX 380 398
cassava4965.m1 NFX 437 454
cassava4965.m1 NFX 490 508
cassava4965.m1 NFX 519 550

Links

Other NFX family TFs
Other Manihot esculenta TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0012s04070 Populus trichocarpa POPTR_0012s04070 N 0.881
ATNFXL1 Arabidopsis thaliana AT1G10170 N 0.869
Bra019958 Brassica rapa Bra019958 N 0.869
Bo5g010600 Brassica oleracea Bo5g010600 N 0.869
Lus10034470.g Linum usitatissimum Lus10034470.g N 0.863
Gorai.006G058600 Gossypium raimondii Gorai.006G058600 N 0.862
Ciclev10018607m.g Citrus clementina Ciclev10018607m.g N 0.858
orange1.1g001378m.g Citrus sinensis orange1.1g001378m.g N 0.858
GLYMA08G06040 Glycine max GLYMA08G06040 N 0.856
ATNFXL1 Arabidopsis lyrata fgenesh2_kg.1__1086__AT1G10170.1 N 0.856
TCM_012484 Theobroma cacao TCM_012484 N 0.856
Lus10025071.g Linum usitatissimum Lus10025071.g N 0.856
Cucsa.122080 Cucumis sativus Cucsa.122080 N 0.850
GLYMA07G11834 Glycine max GLYMA07G11834 N 0.850
Eucgr.H00552 Eucalyptus grandis Eucgr.H00552 N 0.850
GLYMA09G30343 Glycine max GLYMA09G30343 N 0.850
TCM_017029 Theobroma cacao TCM_017029 N 0.848
Carubv10008145m.g Capsella rubella Carubv10008145m.g N 0.844
Aquca_044_00077 Aquilegia coerulea Aquca_044_00077 N 0.844
Cagra.1508s0074 Capsella grandiflora Cagra.1508s0074 N 0.844
fgenesh1_pg.C_scaffold_1003098 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1003098 N 0.831
Aquca_032_00102 Aquilegia coerulea Aquca_032_00102 N 0.831
PK00983.1 Cannabis sativa PK00983.1 N 0.831
Eucgr.K02284 Eucalyptus grandis Eucgr.K02284 N 0.827
Cla018720 Citrullus lanatus Cla018720 N 0.819
Bra031704 Brassica rapa Bra031704 N 0.814
GRMZM2G087787 Zea mays GRMZM2G087787 N 0.812
27791.m000083 Ricinus communis 27791.m000083 N 0.812
Sb10g009070 Sorghum bicolor Sb10g009070 N 0.806
Sb04g038100 Sorghum bicolor Sb04g038100 N 0.800
MDP0000280911 Malus domestica MDP0000280911 N 0.769
Bra018458 Brassica rapa Bra018458 N 0.769
SapurV1A.0082s0290 Salix purpurea SapurV1A.0082s0290 N 0.769
Bo8g059130 Brassica oleracea Bo8g059130 N 0.769
PRUPE_ppa000543mg Prunus persica PRUPE_ppa000543mg N 0.769
Pm025049 Prunus mume Pm025049 N 0.762
POPTR_0015s05030 Populus trichocarpa POPTR_0015s05030 N 0.738
Ca_16794 Cicer arietinum Ca_16794 N 0.731
MDP0000603846 Malus domestica MDP0000603846 N 0.706