CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G307823
(
Zea mays
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01422 (zf-NF-X1)
IPR000967
GRMZM2G307823
T300625_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G307823_P01
NFX
255
272
CPHVCVLQCHPGPCPPCK
GRMZM2G307823_P01
NFX
299
328
TCGRPCEQLLPCKRHRCEKVCHTGSCGDCA
GRMZM2G307823_P01
NFX
374
392
CGNHACKDMCHPGPCGECE
GRMZM2G307823_P01
NFX
432
450
CGVHRCKVNCHEGECPPCL
GRMZM2G307823_P01
NFX
488
499
CGRHRCSELCCP
GRMZM2G307823_P01
NFX
527
545
CGQHLCQLLCHSGHCPPCL
GRMZM2G307823_P01
NFX
637
655
CGIHACNRPCHPPPCDQTP
GRMZM2G307823_P01
NFX
670
701
CGQVCGAVRRECKHTCTASCHPSSPCPDLRCE
Links
Other
NFX
family TFs
Other
Zea mays
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G409627
Zea mays
GRMZM2G409627
N
1.000
Si005790m.g
Setaria italica
Si005790m.g
N
0.845
chr2.LjT01H08.70.nc
Lotus japonicus
chr2.LjT01H08.70.nc
N
0.792
Solyc03g118420.2
Solanum lycopersicum
Solyc03g118420.2
N
0.782
VIT_17s0000g01920
Vitis vinifera
VIT_17s0000g01920
N
0.771
Bostr.13671s0471
Boechera stricta
Bostr.13671s0471
N
0.761
Bostr.15697s0430
Boechera stricta
Bostr.15697s0430
N
0.761
Thhalv10006708m.g
Eutrema salsugineum
Thhalv10006708m.g
N
0.754
Sb10g009070
Sorghum bicolor
Sb10g009070
N
0.744
GRMZM2G087787
Zea mays
GRMZM2G087787
N
0.738
Sb04g038100
Sorghum bicolor
Sb04g038100
N
0.738
AMTR_s00060p00124510
Amborella trichopoda
AMTR_s00060p00124510
N
0.732
MTR_4g027040
Medicago truncatula
MTR_4g027040
N
0.725