CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00060p00124510
(
Amborella trichopoda
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01422 (zf-NF-X1)
IPR000967
AMTR_s00060p00124510
T300359_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERM95865
NFX
369
386
CPHLCVLQCHPGPCPPCK
ERM95865
NFX
424
442
CGRHYCEEACHVGPCNSCE
ERM95865
NFX
488
506
CGNHQCEKSCHPGECGECE
ERM95865
NFX
546
564
CGHHSCEASCHEGACPPCQ
ERM95865
NFX
606
617
CGRHRCNERCCP
ERM95865
NFX
647
665
CGQHTCGILCHSGHCPPCL
ERM95865
NFX
757
775
CGMHACARTCHPSPCDPPP
ERM95865
NFX
793
824
CGQVCGAPRRDCRHTCAAECHPGQLCPDQRCN
Links
Other
NFX
family TFs
Other
Amborella trichopoda
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc03g118420.2
Solanum lycopersicum
Solyc03g118420.2
N
0.761
Bostr.13671s0471
Boechera stricta
Bostr.13671s0471
N
0.754
Bostr.15697s0430
Boechera stricta
Bostr.15697s0430
N
0.754
Thhalv10006708m.g
Eutrema salsugineum
Thhalv10006708m.g
N
0.754
GRMZM2G307823
Zea mays
GRMZM2G307823
N
0.732
GRMZM2G409627
Zea mays
GRMZM2G409627
N
0.732
VIT_17s0000g01920
Vitis vinifera
VIT_17s0000g01920
N
0.729
chr2.LjT01H08.70.nc
Lotus japonicus
chr2.LjT01H08.70.nc
N
0.722