CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG14997
(
Caenorhabditis briggsae
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CBG14997
T301544_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-34
M00690_2.00
Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN
PBM
Narasimhan et al.(2015)
pTH9907
0.938
0.671
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG14997
Nuclear receptor
23
92
LSCLVCGDPNAKRHYGAMSCNGCKGFFRRSIWEKRVYHCAFGGRCIIETKYRNRCRQCRLKKCEAVGMDR
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis briggsae
TFs
92 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O3_06648
Capronia epimyces
A1O3_06648
N
ACLA_008320
Aspergillus clavatus
CADACLAG00000505
N
BBA_07284
Beauveria bassiana
BBA_07284
N
CFIO01_05255
Colletotrichum fioriniae
CFIO01_05255
N
CFIO01_07145
Colletotrichum fioriniae
CFIO01_07145
N
Cob_01936
Colletotrichum orbiculare
Cob_01936
N
Cob_07663
Colletotrichum orbiculare
Cob_07663
N
MGG_01779
Magnaporthe oryzae
MGG_01779
N
PFICI_11615
Pestalotiopsis fici
PFICI_11615
N
SNOG_01186
Stagonospora nodorum
SNOG_01186
N
SNOG_01186
Phaeosphaeria nodorum
SNOG_01186
N
VHEMI04633
Torrubiella hemipterigena
VHEMI04633
N