NR1H4 (Homo sapiens)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 ENSG00000012504 T303206_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NR1H4
M00367_2.00		 Homo sapiens
NNNTWTTATDHNN
NNDHATAAWANNN		 PBM
Barrera et al.(2016)
NR1H4_C144R		 (Direct) (Direct)
NR1H4
M00368_2.00		 Homo sapiens
NVRGGTCANN
NNTGACCYBN		 PBM
Barrera et al.(2016)
NR1H4_REF		 (Direct) (Direct)
NR1H4
M05876_2.00		 Homo sapiens
DRGKTCAHHKD
HMDDTGAMCYH		 SMiLE-seq
Isakova et al.(2017)
NR1H4		 (Direct) (Direct)
NR1H4
M08152_2.00		 Homo sapiens
NNGGTCATTNN
NNAATGACCNN		 ChIP-seq
Mathelier et al.(2014)
MA1110.1		 (Direct) (Direct)
NR1H4
M09263_2.00		 Homo sapiens
CCBVNVGGYCRBTGMCCYB
VRGGKCAVYGRCCBNBVGG		 Misc
Kulakovskiy et al.(2013)
NR1H4_HUMAN.H11MO.0.B		 (Direct) (Direct)
NR1H4
M11086_2.00		 Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXR_Q2		 (Direct) (Direct)
NR1H4
M11087_2.00		 Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXR_Q3		 (Direct) (Direct)
NR1H4
M11088_2.00		 Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXR_Q5		 (Direct) (Direct)
NR1H4
M11089_2.00		 Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXRRXR_Q5		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Nr1h4
M09332_2.00 		Mus musculus
CCBVNVGGYCRBTGMCCYB
VRGGKCAVYGRCCBNBVGG		 Misc
Kulakovskiy et al.(2013)
NR1H4_MOUSE.H11MO.0.A 		0.990 1.000
Nr1h4
M09618_2.00 		Mus musculus
NRGGBCANTGVCCY
RGGBCANTGVCCYN		 Misc
Heinz et al.(2010)
Liver-FXR_Chong_et_al. 		0.990 1.000
nr1h5.S
M11194_2.00 		Xenopus laevis Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXRIR1_Q6 		0.984 0.900
EcR
M06414_2.00 		Drosophila melanogaster
RAGGTCAW
WTGACCTY		 B1H
Zhu et al.(2011)
EcR_SANGER_5_FBgn0000546 		0.973 0.800
NR1H3
M09264_2.00 		Homo sapiens
NHRRGGBHABHNNRGGNCA
TGNCCYNNDVTDVCCYYDN		 Misc
Kulakovskiy et al.(2013)
NR1H3_HUMAN.H11MO.0.B 		0.957 0.714
Nr1h3
M09301_2.00 		Mus musculus
VDGDNCARAGKBCAN
NTGVMCTYTGNHCHB		 Misc
Kulakovskiy et al.(2013)
NR1H3_MOUSE.H11MO.0.A 		0.957 0.714
Nr1h2
M09620_2.00 		Mus musculus
RGGTYACTNNAGGTCA
TGACCTNNAGTRACCY		 Misc
Heinz et al.(2010)
RAW-LXRb.biotin_GSE21512 		0.913 0.671
Rora
M00819_2.00 		Mus musculus
NNRGGTCA
TGACCYNN		 PBM
Weirauch et al.(2013)
pTH3464 		0.868 0.529
RORA
M03353_2.00 		Homo sapiens
NMRAGGTCAAVYYVAGGTCA
TGACCTBRRBTTGACCTYKN		 SELEX
Jolma et al.(2013)
RORA_1 		0.868 0.529
RORA
M03354_2.00 		Homo sapiens
WAWSTRGGTYASTAGGTCA
TGACCTASTRACCYASWTW		 SELEX
Jolma et al.(2013)
RORA_2 		0.868 0.529
RORC
M05621_2.00 		Homo sapiens
KRGGTCAYGMCCYM
KRGGKCRTGACCYM		 SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_1 		0.868 0.529
RORC
M05622_2.00 		Homo sapiens
NAWNKRGGTYANTRGGTCAN
NTGACCYANTRACCYMNWTN		 SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_2 		0.868 0.529
RORC
M05880_2.00 		Homo sapiens
NDAWNTRGGKCA
TGMCCYANWTHN		 SMiLE-seq
Isakova et al.(2017)
RORc 		0.868 0.529
RORA
M02705_2.00 		Homo sapiens
WWVDAGGTCA
TGACCTHBWW		 SELEX
Mathelier et al.(2014)
MA0071.1 		0.868 0.529
RORA
M02706_2.00 		Homo sapiens
NDWAWBTAGGTCAN
NTGACCTAVWTWHN		 SELEX
Mathelier et al.(2014)
MA0072.1 		0.868 0.529
RORA
M09265_2.00 		Homo sapiens
VWNDRGGBCARDR
YHYTGVCCYHNWB		 Misc
Kulakovskiy et al.(2013)
RORA_HUMAN.H11MO.0.C 		0.868 0.529
RORC
M09282_2.00 		Homo sapiens
NDAWSTRRGTCA
TGACYYASWTHN		 Misc
Kulakovskiy et al.(2013)
RORG_HUMAN.H11MO.0.C 		0.868 0.529
Rora
M09327_2.00 		Mus musculus
VWNDRGGBCARDR
YHYTGVCCYHNWB		 Misc
Kulakovskiy et al.(2013)
RORA_MOUSE.H11MO.0.C 		0.868 0.529
RORA
M11090_2.00 		Homo sapiens
DWWWVDAGGTCAH
DTGACCTHBWWWH		 Transfac
Matys et al.(2006)
V$RORA1_01 		0.868 0.529
RORA
M11091_2.00 		Homo sapiens
DWAWBTAGGTCAN
NTGACCTAVWTWH		 Transfac
Matys et al.(2006)
V$RORA2_01 		0.868 0.529
RORA
M11092_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORALPHA_Q4 		0.868 0.529
RORA
M11093_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORA_Q4 		0.868 0.529
RORC
M05623_2.00 		Homo sapiens
TRGGTCAYGACCYA
TRGGTCRTGACCYA		 SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_1 		0.868 0.529
RORC
M05624_2.00 		Homo sapiens
NAWNTRGGTYASTAGGTCAN
NTGACCTASTRACCYANWTN		 SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_2 		0.868 0.529
Rorb
M00820_2.00 		Mus musculus
NRGGTCANN
NNTGACCYN		 PBM
Weirauch et al.(2013)
pTH3469 		0.864 0.529
rorb
M02404_2.00 		Tetraodon nigroviridis
NGAGGTCANN
NNTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6589 		0.864 0.529
RORB
M05677_2.00 		Homo sapiens
DAWNTRGGTYAGTRGGTCAN
NTGACCYACTRACCYANWTH		 SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_1 		0.864 0.529
RORB
M05678_2.00 		Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN		 SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_2 		0.864 0.529
RORB
M05883_2.00 		Homo sapiens
AWNBRGGTCAN
NTGACCYVNWT		 SMiLE-seq
Isakova et al.(2017)
RORb 		0.864 0.529
RORB
M11187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORBETA_Q2 		0.864 0.529
RORB
M05679_2.00 		Homo sapiens
DAWBTRGGTYAGTRGGTCRN
NYGACCYACTRACCYAVWTH		 SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_1 		0.864 0.529
RORB
M05680_2.00 		Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN		 SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_2 		0.864 0.529
Rorc
M09324_2.00 		Mus musculus
NDAWSTRRGTCA
TGACYYASWTHN		 Misc
Kulakovskiy et al.(2013)
RORG_MOUSE.H11MO.0.B 		0.848 0.514
Rorc
M09617_2.00 		Mus musculus
AWBTRGGTCA
TGACCYAVWT		 Misc
Heinz et al.(2010)
EL4-RORgt.Flag_GSE56019 		0.848 0.514
RORC
M02405_2.00 		Tetraodon nigroviridis
NGAGGTCANN
NNTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6612 		0.847 0.500
Q969A9_BOMMO
M02410_2.00 		Bombyx mori
VRGGTCDN
NHGACCYB		 PBM
Weirauch et al.(2014)
pTH5516 		0.838 0.529
svp
M06423_2.00 		Drosophila melanogaster
ARGGTCA
TGACCYK		 B1H
Zhu et al.(2011)
svp_SANGER_5_FBgn0003651 		0.836 0.529
NR2F6
M02396_2.00 		Homo sapiens
NNRGGTCR
YGACCYNN		 PBM
Weirauch et al.(2014)
pTH6747 		0.835 0.514
NR2F6
M03386_2.00 		Homo sapiens
RRGGTCAAAAGGTCA
TGACCTTTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F6_1 		0.835 0.514
NR2F6
M03387_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F6_2 		0.835 0.514
NR2F6
M03388_2.00 		Homo sapiens
NRGGTCAAAGGTCA
TGACCTTTGACCYN		 SELEX
Jolma et al.(2013)
NR2F6_3 		0.835 0.514
NR2F6
M05641_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_1 		0.835 0.514
NR2F6
M05642_2.00 		Homo sapiens
RAGGTCANTGACCTY
RAGGTCANTGACCTY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_2 		0.835 0.514
NR2F6
M05645_2.00 		Homo sapiens
NRGGTCARAGGTCRN
NYGACCTYTGACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_1 		0.835 0.514
NR2F6
M05646_2.00 		Homo sapiens
NRGGTCANYGACCYY
RRGGTCRNTGACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_2 		0.835 0.514
NR2F6
M11153_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EAR2_Q2 		0.835 0.514
NR2F6
M11154_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EAR2_Q4 		0.835 0.514
NR2F6
M05643_2.00 		Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_1 		0.835 0.514
NR2F6
M05644_2.00 		Homo sapiens
RRGGTCRNYGACCYY
RRGGTCRNYGACCYY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_2 		0.835 0.514
NR2F6
M05647_2.00 		Homo sapiens
NRGGTYADRGGKBRN
NYVMCCYHTRACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_1 		0.835 0.514
NR2F6
M05648_2.00 		Homo sapiens
NRGGTCANYGACCYN
NRGGTCRNTGACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_2 		0.835 0.514
AAEL009588
M02388_2.00 		Aedes aegypti
NRGGTCR
YGACCYN		 PBM
Weirauch et al.(2014)
pTH5508 		0.832 0.514
Hr46
M02406_2.00 		Drosophila melanogaster
NRGGTCAN
NTGACCYN		 PBM
Weirauch et al.(2014)
pTH6142 		0.832 0.514
Hr46
M03926_2.00 		Drosophila melanogaster
RGGTCAGTRGGTCA
TGACCYACTGACCY		 SELEX
Nitta et al.(2015)
Hr46_1 		0.832 0.514
Hr46
M06412_2.00 		Drosophila melanogaster
AWKTGGGTYW
WRACCCAMWT		 B1H
Zhu et al.(2011)
Hr46_FlyReg_FBgn0000448 		0.832 0.514
Hr46
M06413_2.00 		Drosophila melanogaster
HWNBAGGTCA
TGACCTVNWD		 B1H
Zhu et al.(2011)
Hr46_SANGER_5_FBgn0000448 		0.832 0.514
Nr2c1
M00812_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Weirauch et al.(2013)
pTH1284 		0.827 0.586
Nr2c1
M02399_2.00 		Mus musculus
RRGGTCAH
DTGACCYY		 PBM
Weirauch et al.(2014)
pTH3466 		0.827 0.586
Nr2c1
M09304_2.00 		Mus musculus
RBYVRVAGGTCAB
VTGACCTBYBRVY		 Misc
Kulakovskiy et al.(2013)
NR2C1_MOUSE.H11MO.0.C 		0.827 0.586
NR2C1
M05597_2.00 		Homo sapiens
NRGKKCRYGAMMYN
NRKKTCRYGMMCYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_1 		0.827 0.571
NR2C1
M05598_2.00 		Homo sapiens
NRRGGTCAN
NTGACCYYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_2 		0.827 0.571
NR2C1
M09273_2.00 		Homo sapiens
RBYVRVAGGTCAB
VTGACCTBYBRVY		 Misc
Kulakovskiy et al.(2013)
NR2C1_HUMAN.H11MO.0.C 		0.827 0.571
NR2C1
M05599_2.00 		Homo sapiens
NRRGGTCAN
NTGACCYYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_1 		0.827 0.571
NR2C1
M05600_2.00 		Homo sapiens
RRGGTCRYGACCYY
RRGGTCRYGACCYY		 SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_2 		0.827 0.571
nr2f2
M02393_2.00 		Danio rerio
NNRGGTCAN
NTGACCYNN		 PBM
Weirauch et al.(2014)
pTH5882 		0.820 0.514
Nr2f1
M00822_2.00 		Mus musculus
DRGGTCRN
NYGACCYH		 PBM
Weirauch et al.(2013)
pTH3811 		0.820 0.514
NR2F1
M03403_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F1_1 		0.820 0.514
NR2F1
M03404_2.00 		Homo sapiens
RRGGTCAARAGGTCAN
NTGACCTYTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F1_2 		0.820 0.514
NR2F1
M03405_2.00 		Homo sapiens
RRGGTCAN
NTGACCYY		 SELEX
Jolma et al.(2013)
NR2F1_3 		0.820 0.514
NR2F1
M03406_2.00 		Homo sapiens
NHRRGGTCANVNG
CNBNTGACCYYDN		 SELEX
Jolma et al.(2013)
NR2F1_4 		0.820 0.514
NR2F1
M05661_2.00 		Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_1 		0.820 0.514
NR2F1
M05662_2.00 		Homo sapiens
VRGGTCANYGACCYY
RRGGTCRNTGACCYB		 SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_2 		0.820 0.514
NR2F1
M05665_2.00 		Homo sapiens
VRGGTCAAAGGTCAN
NTGACCTTTGACCYB		 SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_1 		0.820 0.514
NR2F1
M05666_2.00 		Homo sapiens
RRGGTCANYGACCYY
RRGGTCRNTGACCYY		 SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_2 		0.820 0.514
NR2F1
M09291_2.00 		Homo sapiens
NRRRBSRRRGGKCANVN
NBNTGMCCYYYSVYYYN		 Misc
Kulakovskiy et al.(2013)
COT1_HUMAN.H11MO.0.C 		0.820 0.514
Nr2f1
M09334_2.00 		Mus musculus
YARAGGTCA
TGACCTYTR		 Misc
Kulakovskiy et al.(2013)
COT1_MOUSE.H11MO.0.B 		0.820 0.514
NR2F1
M11172_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COUPTF1_Q6_01 		0.820 0.514
NR2F1
M05663_2.00 		Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_1 		0.820 0.514
NR2F1
M05664_2.00 		Homo sapiens
NRGGTCANYGACCYH
DRGGTCRNTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_2 		0.820 0.514
NR2F1
M05667_2.00 		Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_1 		0.820 0.514
NR2F1
M05668_2.00 		Homo sapiens
RRGGTCRNYGACCYY
RRGGTCRNYGACCYY		 SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_2 		0.820 0.514
Nr2f2
M00184_2.00 		Mus musculus
RRGGTCAN
NTGACCYY		 PBM
Badis et al.(2009)
Nr2f2_2192 		0.815 0.514
NR2F2
M08157_2.00 		Homo sapiens
NNAAGGTCANN
NNTGACCTTNN		 ChIP-seq
Mathelier et al.(2014)
MA1111.1 		0.815 0.514
NR2F2
M08223_2.00 		Homo sapiens
AAAGGTCA
TGACCTTT		 ChIP-seq
Contrino et al.(2012)
Mv102 		0.815 0.514
NR2F2
M08224_2.00 		Homo sapiens
GGKCARAGGB
VCCTYTGMCC		 ChIP-seq
Contrino et al.(2012)
Mv104 		0.815 0.514
NR2F2
M09293_2.00 		Homo sapiens
NARRGGTCADRDN
NHYHTGACCYYTN		 Misc
Kulakovskiy et al.(2013)
COT2_HUMAN.H11MO.0.A 		0.815 0.514
Nr2f2
M09325_2.00 		Mus musculus
NNHRAGGTCANVD
HBNTGACCTYDNN		 Misc
Kulakovskiy et al.(2013)
COT2_MOUSE.H11MO.0.A 		0.815 0.514
NR2F2
M11180_2.00 		Homo sapiens
WRRKKTCAARGGYTCA
TGARCCYTTGAMMYYW		 Transfac
Matys et al.(2006)
V$ARP1_01 		0.815 0.514
NR2F2
M11181_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COUPTF2_Q6 		0.815 0.514
Hr78
M06430_2.00 		Drosophila melanogaster
HVAGGTCA
TGACCTBD		 B1H
Zhu et al.(2011)
Hr78_SANGER_5_FBgn0015239 		0.804 0.571
VDR
M03363_2.00 		Homo sapiens
GRGTTCAYHGRGTTCA
TGAACYCDRTGAACYC		 SELEX
Jolma et al.(2013)
VDR_1 		0.799 0.529
Vdr
M03429_2.00 		Mus musculus
RRGTTCAYHGRGTTCA
TGAACYCDRTGAACYY		 SELEX
Jolma et al.(2013)
Vdr_1 		0.799 0.529
VDR
M05877_2.00 		Homo sapiens
HRRGTTCA
TGAACYYD		 SMiLE-seq
Isakova et al.(2017)
VDR 		0.799 0.529
VDR
M09269_2.00 		Homo sapiens
NRGGKCANNGRGKKCR
YGMMCYCNNTGMCCYN		 Misc
Kulakovskiy et al.(2013)
VDR_HUMAN.H11MO.0.A 		0.799 0.529
Vdr
M09315_2.00 		Mus musculus
NRGGKCANNGRGKKCR
YGMMCYCNNTGMCCYN		 Misc
Kulakovskiy et al.(2013)
VDR_MOUSE.H11MO.0.A 		0.799 0.529
VDR
M09606_2.00 		Homo sapiens
NRRGGTCANNRRGKKCANNN
NNNTGMMCYYNNTGACCYYN		 Misc
Heinz et al.(2010)
GM10855-VDR+vitD_GSE22484 		0.799 0.529
VDR
M11116_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$VDR_Q3 		0.799 0.529
VDR
M11117_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$VDR_Q6_01 		0.799 0.529
VDR
M11118_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$VDR_Q6 		0.799 0.529
O77476_BRUPA
M02422_2.00 		Brugia pahangi
NRGGTCAN
NTGACCYN		 PBM
Weirauch et al.(2014)
pTH6019 		0.788 0.586
NR2C2
M03407_2.00 		Homo sapiens
VRGGTCAAAGGTCA
TGACCTTTGACCYB		 SELEX
Jolma et al.(2013)
NR2C2_1 		0.778 0.571
NR2C2
M05669_2.00 		Homo sapiens
NRGGTCRN
NYGACCYN		 SELEX
Yin et al.(2017)
NR2C2_eDBD_HT-SELEX 		0.778 0.571
NR2C2
M08156_2.00 		Homo sapiens
NVRGGTCARAGGKCA
TGMCCTYTGACCYBN		 ChIP-seq
Mathelier et al.(2014)
MA0504.1 		0.778 0.571
NR2C2
M07990_2.00 		Homo sapiens
WBYRCTTCCGGGKYV
BRMCCCGGAAGYRVW		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_TR4_UCD 		0.778 0.571
NR2C2
M07991_2.00 		Homo sapiens
DWBYRCTTCCGGGKY
RMCCCGGAAGYRVWH		 ChIP-seq
Gerstein et al.(2012)
HepG2b_TR4_UCD 		0.778 0.571
NR2C2
M07992_2.00 		Homo sapiens
WBYRCTTCCGGGKYR
YRMCCCGGAAGYRVW		 ChIP-seq
Gerstein et al.(2012)
K562b_TR4_UCD 		0.778 0.571
NR2C2
M08221_2.00 		Homo sapiens
DWBYDCTTCCGGGKY
RMCCCGGAAGHRVWH		 ChIP-seq
Contrino et al.(2012)
Mv97 		0.778 0.571
NR2C2
M08222_2.00 		Homo sapiens
TCARAGGTCA
TGACCTYTGA		 ChIP-seq
Contrino et al.(2012)
Mv98 		0.778 0.571
NR2C2
M09292_2.00 		Homo sapiens
RBTYMVRGGTCR
YGACCYBKRAVY		 Misc
Kulakovskiy et al.(2013)
NR2C2_HUMAN.H11MO.0.B 		0.778 0.571
Nr2c2
M09303_2.00 		Mus musculus
RRGKSARAGGKCA
TGMCCTYTSMCYY		 Misc
Kulakovskiy et al.(2013)
NR2C2_MOUSE.H11MO.0.A 		0.778 0.571
NR2C2
M09611_2.00 		Homo sapiens
RRGGTCARAGGTCA
TGACCTYTGACCYY		 Misc
Heinz et al.(2010)
Hela-TR4_GSE24685 		0.778 0.571
NR2C2
M11173_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NR2C2_03 		0.778 0.571
NR2C2
M11174_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NR2C2_04 		0.778 0.571
NR2C2
M11175_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TR4_01 		0.778 0.571
NR2C2
M11176_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TR4_03 		0.778 0.571
NR2C2
M11177_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TR4_Q2_01 		0.778 0.571
NR2C2
M11178_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TR4_Q2 		0.778 0.571
NR2C2
M11179_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TR4_Q3 		0.778 0.571
NR2C2
M05670_2.00 		Homo sapiens
NRGGTCRN
NYGACCYN		 SELEX
Yin et al.(2017)
NR2C2_eDBD_Methyl-HT-SELEX 		0.778 0.571
Smp_105090
M02412_2.00 		Schistosoma mansoni
RGGTCANN
NNTGACCY		 PBM
Weirauch et al.(2014)
pTH6174 		0.777 0.514
RARG
M02397_2.00 		Homo sapiens
VGGTCANN
NNTGACCB		 PBM
Weirauch et al.(2014)
pTH5430 		0.774 0.557
Rarg
M00810_2.00 		Mus musculus
NNVGKTCANN
NNTGAMCBNN		 PBM
Weirauch et al.(2013)
pTH4269 		0.774 0.557
RARG
M03391_2.00 		Homo sapiens
SRGGTCAAAAGGTCAVD
HBTGACCTTTTGACCYS		 SELEX
Jolma et al.(2013)
RARG_1 		0.774 0.557
RARG
M03392_2.00 		Homo sapiens
RAGGTCAHVHWRAGGTCA
TGACCTYWDBDTGACCTY		 SELEX
Jolma et al.(2013)
RARG_2 		0.774 0.557
RARG
M03393_2.00 		Homo sapiens
RRGGTCAHNNRAGGTCA
TGACCTYNNDTGACCYY		 SELEX
Jolma et al.(2013)
RARG_3 		0.774 0.557
RARG
M03394_2.00 		Homo sapiens
GAGGTCAAAAGGTCAY
RTGACCTTTTGACCTC		 SELEX
Jolma et al.(2013)
RARG_4 		0.774 0.557
RARG
M03395_2.00 		Homo sapiens
RAGGTCAABYARRGKTCA
TGAMCYYTRVTTGACCTY		 SELEX
Jolma et al.(2013)
RARG_5 		0.774 0.557
RARG
M03396_2.00 		Homo sapiens
RAGGTCAHBNVRGGTCA
TGACCYBNVDTGACCTY		 SELEX
Jolma et al.(2013)
RARG_6 		0.774 0.557
Rarg
M03416_2.00 		Mus musculus
RRGGTCAAAAGGTCAH
DTGACCTTTTGACCYY		 SELEX
Jolma et al.(2013)
Rarg_1 		0.774 0.557
Rarg
M03417_2.00 		Mus musculus
RAGGTCAWVHAAAGGTCA
TGACCTTTDBWTGACCTY		 SELEX
Jolma et al.(2013)
Rarg_2 		0.774 0.557
Rarg
M03418_2.00 		Mus musculus
AAGGTCAHSARAGGTCA
TGACCTYTSDTGACCTT		 SELEX
Jolma et al.(2013)
Rarg_3 		0.774 0.557
RARG
M05653_2.00 		Homo sapiens
NRGGTCANV
BNTGACCYN		 SELEX
Yin et al.(2017)
RARG_FL_HT-SELEX 		0.774 0.557
RARG
M05649_2.00 		Homo sapiens
DRGGTCAAAAGKTCAN
NTGAMCTTTTGACCYH		 SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_1 		0.774 0.557
RARG
M05650_2.00 		Homo sapiens
RAGGTCATGACCTH
DAGGTCATGACCTY		 SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_2 		0.774 0.557
Rarg
M05885_2.00 		Mus musculus
NRGGTCANDRGKKYA
TRMMCYHNTGACCYN		 SMiLE-seq
Isakova et al.(2017)
RARg 		0.774 0.557
RARG
M09289_2.00 		Homo sapiens
RGGTCAVVVWGNMMNNDV
BHNNKKNCWBBBTGACCY		 Misc
Kulakovskiy et al.(2013)
RARG_HUMAN.H11MO.0.B 		0.774 0.557
Rarg
M09300_2.00 		Mus musculus
RGGTCAVVVWGNMMNNDV
BHNNKKNCWBBBTGACCY		 Misc
Kulakovskiy et al.(2013)
RARG_MOUSE.H11MO.0.C 		0.774 0.557
Rarg
M09613_2.00 		Mus musculus
RGKTCAAGGBCA
TGVCCTTGAMCY		 Misc
Heinz et al.(2010)
ES-RARg_GSE30538 		0.774 0.557
RARG
M11167_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RARG_Q3 		0.774 0.557
RARG
M05654_2.00 		Homo sapiens
NRGGTCRNV
BNYGACCYN		 SELEX
Yin et al.(2017)
RARG_FL_Methyl-HT-SELEX 		0.774 0.557
RARG
M05651_2.00 		Homo sapiens
DRGGTCAARRGGTCRN
NYGACCYYTTGACCYH		 SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_1 		0.774 0.557
RARG
M05652_2.00 		Homo sapiens
DAGKTCRYGACCYY
RRGGTCRYGAMCTH		 SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_2 		0.774 0.557
Nr2f6
M00811_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Weirauch et al.(2013)
pTH2193 		0.774 0.500
Nr2f6
M03419_2.00 		Mus musculus
RAGGTCAADAGGTCA
TGACCTHTTGACCTY		 SELEX
Jolma et al.(2013)
Nr2f6_1 		0.774 0.500
Nr2f6
M03420_2.00 		Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
Nr2f6_2 		0.774 0.500
Q6VU64_APLCA
M02423_2.00 		Aplysia californica
NRGGTCAN
NTGACCYN		 PBM
Weirauch et al.(2014)
pTH6055 		0.766 0.500
Rxrg
M02400_2.00 		Mus musculus
VRGGTCAN
NTGACCYB		 PBM
Weirauch et al.(2014)
pTH2880 		0.763 0.486
RXRG
M03375_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRG_1 		0.763 0.486
RXRG
M03376_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRG_2 		0.763 0.486
RXRG
M03377_2.00 		Homo sapiens
GRGGTCAAAGGTCA
TGACCTTTGACCYC		 SELEX
Jolma et al.(2013)
RXRG_3 		0.763 0.486
RXRG
M03378_2.00 		Homo sapiens
NRGGTCATGACCYC
GRGGTCATGACCYN		 SELEX
Jolma et al.(2013)
RXRG_4 		0.763 0.486
RXRG
M02746_2.00 		Homo sapiens
GGTCAAAGGTCA
TGACCTTTGACC		 SELEX
Jolma et al.(2010)
RXRG_dimer 		0.763 0.486
RXRG
M05615_2.00 		Homo sapiens
VRGGTCAAAGGTCAN
NTGACCTTTGACCYB		 SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_1 		0.763 0.486
RXRG
M05616_2.00 		Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY		 SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_2 		0.763 0.486
RXRG
M05879_2.00 		Homo sapiens
RGGTBAARGGTBRND
HNYVACCYTTVACCY		 SMiLE-seq
Isakova et al.(2017)
RXRg 		0.763 0.486
RXRG
M09280_2.00 		Homo sapiens
NGTCAAAGGTCAH
DTGACCTTTGACN		 Misc
Kulakovskiy et al.(2013)
RXRG_HUMAN.H11MO.0.B 		0.763 0.486
Rxrg
M09305_2.00 		Mus musculus
VDDVDNSVNRAGKTCAAGGYCA
TGRCCTTGAMCTYNBSNHBHHB		 Misc
Kulakovskiy et al.(2013)
RXRG_MOUSE.H11MO.0.B 		0.763 0.486
RXRG
M05617_2.00 		Homo sapiens
DRGGTBAARGGTBRN
NYVACCYTTVACCYH		 SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_1 		0.763 0.486
RXRG
M05618_2.00 		Homo sapiens
VRGGTCAYGACCYB
VRGGTCRTGACCYB		 SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_2 		0.763 0.486
RARA
M03369_2.00 		Homo sapiens
RRAGGTCAWBWRRGGTCA
TGACCYYWVWTGACCTYY		 SELEX
Jolma et al.(2013)
RARA_1 		0.761 0.557
RARA
M03370_2.00 		Homo sapiens
RAGGTCAAAAGGTCAWKB
VMWTGACCTTTTGACCTY		 SELEX
Jolma et al.(2013)
RARA_2 		0.761 0.557
RARA
M03371_2.00 		Homo sapiens
AGGTCAHNYWRAGGTCA
TGACCTYWRNDTGACCT		 SELEX
Jolma et al.(2013)
RARA_3 		0.761 0.557
RARA
M03372_2.00 		Homo sapiens
ARGGTCAAAAGGTCA
TGACCTTTTGACCYT		 SELEX
Jolma et al.(2013)
RARA_4 		0.761 0.557
RARA
M03373_2.00 		Homo sapiens
WRRGGTCAHSHRRGGTCA
TGACCYYDSDTGACCYYW		 SELEX
Jolma et al.(2013)
RARA_5 		0.761 0.557
RARA
M03374_2.00 		Homo sapiens
AGGTCAWNNARAGGTCA
TGACCTYTNNWTGACCT		 SELEX
Jolma et al.(2013)
RARA_6 		0.761 0.557
RARA
M05607_2.00 		Homo sapiens
NVGGKCANNRGGKCAN
NTGMCCYNNTGMCCBN		 SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_1 		0.761 0.557
RARA
M05608_2.00 		Homo sapiens
NVGGKCAYGNCCBN
NVGGNCRTGMCCBN		 SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_2 		0.761 0.557
RARA
M05609_2.00 		Homo sapiens
NRRGGTCANV
BNTGACCYYN		 SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_3 		0.761 0.557
RARA
M05878_2.00 		Homo sapiens
RAGGTCA
TGACCTY		 SMiLE-seq
Isakova et al.(2017)
RARa 		0.761 0.557
RARA
M09277_2.00 		Homo sapiens
RRRDVDBSNDRAGKTCARGG
CCYTGAMCTYHNSVHBHYYY		 Misc
Kulakovskiy et al.(2013)
RARA_HUMAN.H11MO.0.A 		0.761 0.557
RARA
M11137_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NR1B1_Q6 		0.761 0.557
RARA
M05610_2.00 		Homo sapiens
DRGGKCRNDRGGTCRN
NYGACCYHNYGMCCYH		 SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_1 		0.761 0.557
RARA
M05611_2.00 		Homo sapiens
NVGGTCAYGMCCYN
NRGGKCRTGACCBN		 SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_2 		0.761 0.557
RARA
M05612_2.00 		Homo sapiens
NRAGGTCANN
NNTGACCTYN		 SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_3 		0.761 0.557
Rara
M00185_2.00 		Mus musculus
NRGGTCAN
NTGACCYN		 PBM
Badis et al.(2009)
Rara_1051 		0.761 0.543
Rara
M03432_2.00 		Mus musculus
AAAGGTCAHBVRAGGTCA
TGACCTYBVDTGACCTTT		 SELEX
Jolma et al.(2013)
Rara_1 		0.761 0.543
Rara
M03433_2.00 		Mus musculus
AGGTCAHNHAAAGGTCA
TGACCTTTDNDTGACCT		 SELEX
Jolma et al.(2013)
Rara_2 		0.761 0.543
Rara
M03434_2.00 		Mus musculus
RAGGTCAAAAGGTCA
TGACCTTTTGACCTY		 SELEX
Jolma et al.(2013)
Rara_3 		0.761 0.543
Rara
M09329_2.00 		Mus musculus
RGRTCRDRAGKTCAAGGTCA
TGACCTTGAMCTYHYGAYCY		 Misc
Kulakovskiy et al.(2013)
RARA_MOUSE.H11MO.0.A 		0.761 0.543
Rarb
M02401_2.00 		Mus musculus
NRRGGTCAHN
NDTGACCYYN		 PBM
Weirauch et al.(2014)
pTH2804 		0.758 0.557
RARB
M03355_2.00 		Homo sapiens
AAAGGTCAARAGGTCA
TGACCTYTTGACCTTT		 SELEX
Jolma et al.(2013)
RARB_1 		0.758 0.557
Rarb
M03423_2.00 		Mus musculus
WAAGGTCAAAAGGTCA
TGACCTTTTGACCTTW		 SELEX
Jolma et al.(2013)
Rarb_1 		0.758 0.557
Rarb
M03424_2.00 		Mus musculus
RRAGGTCANBWRAGGTCA
TGACCTYWVNTGACCTYY		 SELEX
Jolma et al.(2013)
Rarb_2 		0.758 0.557
Rarb
M03425_2.00 		Mus musculus
AGGTCAHVBWRAGGTCA
TGACCTYWVBDTGACCT		 SELEX
Jolma et al.(2013)
Rarb_3 		0.758 0.557
RARB
M05563_2.00 		Homo sapiens
NHAAGGTCAN
NTGACCTTDN		 SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_1 		0.758 0.557
RARB
M05564_2.00 		Homo sapiens
RRGGTCAARRGGTCAN
NTGACCYYTTGACCYY		 SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_2 		0.758 0.557
RARB
M05565_2.00 		Homo sapiens
DAGGTCAYGACCYY
RRGGTCRTGACCTH		 SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_3 		0.758 0.557
RARB
M11094_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NR1B2_Q6 		0.758 0.557
RARB
M05566_2.00 		Homo sapiens
NHRAGGTCAH
DTGACCTYDN		 SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_1 		0.758 0.557
RARB
M05567_2.00 		Homo sapiens
RRGGTCAHRRGGTCAN
NTGACCYYDTGACCYY		 SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_2 		0.758 0.557
RARB
M05568_2.00 		Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY		 SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_3 		0.758 0.557
Rxrb
M02402_2.00 		Mus musculus
VRGGTCAH
DTGACCYB		 PBM
Weirauch et al.(2014)
pTH2861 		0.753 0.486
RXRB
M03415_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRB_1 		0.753 0.486
Rxrb
M03435_2.00 		Mus musculus
GRGGTCAAAGGTCA
TGACCTTTGACCYC		 SELEX
Jolma et al.(2013)
Rxrb_1 		0.753 0.486
RXRB
M05681_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_1 		0.753 0.486
RXRB
M05682_2.00 		Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_2 		0.753 0.486
RXRB
M09297_2.00 		Homo sapiens
DSAGGTCASD
HSTGACCTSH		 Misc
Kulakovskiy et al.(2013)
RXRB_HUMAN.H11MO.0.C 		0.753 0.486
Rxrb
M09330_2.00 		Mus musculus
DSAGGTCASD
HSTGACCTSH		 Misc
Kulakovskiy et al.(2013)
RXRB_MOUSE.H11MO.0.C 		0.753 0.486
RXRB
M05683_2.00 		Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_1 		0.753 0.486
RXRB
M05684_2.00 		Homo sapiens
RRGGTCRYGACCYY
RRGGTCRYGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_2 		0.753 0.486
Rxra
M00181_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Badis et al.(2009)
Rxra_1035 		0.753 0.471
RXRA
M03408_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRA_1 		0.753 0.471
RXRA
M03409_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRA_2 		0.753 0.471
RXRA
M03410_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRA_3 		0.753 0.471
RXRA
M03411_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRA_4 		0.753 0.471
Rxra
M03421_2.00 		Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
Rxra_1 		0.753 0.471
Rxra
M03422_2.00 		Mus musculus
RGGTCATGACCY
RGGTCATGACCY		 SELEX
Jolma et al.(2013)
Rxra_2 		0.753 0.471
RXRA
M05671_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRA_eDBD_HT-SELEX 		0.753 0.471
RXRA
M05882_2.00 		Homo sapiens
VRGKTBAAAGGTYRH
DYRACCTTTVAMCYB		 SMiLE-seq
Isakova et al.(2017)
RXRa 		0.753 0.471
RXRA
M07993_2.00 		Homo sapiens
NRRGGTCA
TGACCYYN		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_RXRA_HudsonAlpha 		0.753 0.471
RXRA
M07994_2.00 		Homo sapiens
DDNNMRRGGTCANDN
NHNTGACCYYKNNHH		 ChIP-seq
Gerstein et al.(2012)
HepG2_RXRA_HudsonAlpha 		0.753 0.471
RXRA
M09294_2.00 		Homo sapiens
VDDDNDNNVRRRGGKCAVDV
BHBTGMCCYYYBNNHNHHHB		 Misc
Kulakovskiy et al.(2013)
RXRA_HUMAN.H11MO.0.A 		0.753 0.471
Rxra
M09306_2.00 		Mus musculus
DDVNNNNNRAGKTCAAGGYCA
TGRCCTTGAMCTYNNNNNBHH		 Misc
Kulakovskiy et al.(2013)
RXRA_MOUSE.H11MO.0.A 		0.753 0.471
RXRA
M11182_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RXRA_07 		0.753 0.471
RXRA
M05672_2.00 		Homo sapiens
RRGGTCAAAGGTCAH
DTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRA_eDBD_Methyl-HT-SELEX 		0.753 0.471
usp
M03934_2.00 		Drosophila melanogaster
ARRGGTCAAAGGTCA
TGACCTTTGACCYYT		 SELEX
Nitta et al.(2015)
usp_1 		0.746 0.500
usp
M06426_2.00 		Drosophila melanogaster
HRRGGTCAH
DTGACCYYD		 B1H
Zhu et al.(2011)
usp_SANGER_5_FBgn0003964 		0.746 0.500
usp
M02709_2.00 		Drosophila melanogaster
GGGGTCACSN
NSGTGACCCC		 SELEX
Mathelier et al.(2014)
MA0016.1 		0.746 0.500
usp
M09689_2.00 		Drosophila melanogaster
KRGGTCACG
CGTGACCYM		 Misc
Kulakovskiy et al.(2009)
usp 		0.746 0.500
usp
M11191_2.00 		Drosophila melanogaster
GRGGTCAYS
SRTGACCYC		 Transfac
Matys et al.(2006)
I$CF1_01 		0.746 0.500
usp
M11192_2.00 		Drosophila melanogaster
GGGGTCAYS
SRTGACCCC		 Transfac
Matys et al.(2006)
I$CF1_02 		0.746 0.500
For this family, TFs with SR scores > 0.745 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00367_2.00 Nuclear receptor 14 83
M00368_2.00 Nuclear receptor 14 83

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000188403 Nuclear receptor 135 204
ENSP00000315442 Nuclear receptor 125 194
ENSP00000376712 Nuclear receptor 125 194
ENSP00000447149 Nuclear receptor 135 204
ENSP00000448506 Nuclear receptor 125 194
ENSP00000448978 Nuclear receptor 125 196

Links

Other Nuclear receptor family TFs
Other Homo sapiens TFs

1830 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL011013 Aedes aegypti AAEL011013 I
AALB007758 Anopheles albimanus AALB007758 I
AALB007964 Anopheles albimanus AALB007964 I
Aan_R007307 Calypte anna Aan_R007307 N
Aan_R007898 Calypte anna Aan_R007898 N
AARA003714 Anopheles arabiensis AARA003714 I
AARA010261 Anopheles arabiensis AARA010261 N
AATE009363 Anopheles atroparvus AATE009363 I
ACHR009289 Anopheles christyi ACHR009289 N
ACOM023265 Anopheles coluzzii ACOM023265 I
ACOM027359 Anopheles coluzzii ACOM027359 I
ACOM042361 Anopheles coluzzii ACOM042361 N
ACUA010023 Anopheles culicifacies ACUA010023 N
ACUA025040 Anopheles culicifacies ACUA025040 I
ADAC005208 Anopheles darlingi ADAC005208 I
ADIR001121 Anopheles dirus ADIR001121 I
AEPI002639 Anopheles epiroticus AEPI002639 N
AFAF010850 Anopheles farauti AFAF010850 I
Afo_R003668 Aptenodytes forsteri Afo_R003668 N
Afo_R004895 Aptenodytes forsteri Afo_R004895 N
AFUN000102 Anopheles funestus AFUN000102 I
AFUN005600 Anopheles funestus AFUN005600 N
AGAP000773 Anopheles gambiae AGAP000773 N
AGAP010058 Anopheles gambiae AGAP010058 I
Alligator_sinensis_CCG004879.1 Alligator sinensis Alligator_sinensis_CCG004879.1 N
AMAM016994 Anopheles maculatus AMAM016994 N
AMEC013102 Anopheles melas AMEC013102 N
AMEC021622 Anopheles melas AMEC021622 I
AMEM005407 Anopheles merus AMEM005407 I
AMIN005129 Anopheles minimus AMIN005129 N
AMIN006671 Anopheles minimus AMIN006671 I
AQUA008255 Anopheles quadriannulatus AQUA008255 N
AQUA009218 Anopheles quadriannulatus AQUA009218 I
ASTEI03596 Anopheles stephensi ASTEI03596 N
ASTEI03921 Anopheles stephensi ASTEI03921 I
A_05788 Schistosoma haematobium A_05788 N
BGIBMGA003821 Bombyx mori BGIBMGA003821 I
Brh_R001528 Buceros rhinoceros Brh_R001528 N
CapteG165634 Capitella teleta CapteG165634 I
Cflo_03420--XP_394146.3_APIME Camponotus floridanus Cflo_03420--XP_394146.3_APIME I
CGI_10023142 Crassostrea gigas CGI_10023142 N
Cmyd_10005300 Chelonia mydas Cmyd_10005300 N
Cmyd_10020168 Chelonia mydas Cmyd_10020168 N
CPIJ009948 Culex quinquefasciatus CPIJ009948 I
CpipJ_CPIJ009948 Culex pipiens CpipJ_CPIJ009948 I
csin104979 Clonorchis sinensis csin104979 N
D915_00831 Fasciola hepatica D915_00831 N
DAPPUDRAFT_311851 Daphnia pulex DAPPUDRAFT_311851 I
ENSAMEG00000005588 Ailuropoda melanoleuca ENSAMEG00000005588 N
ENSAMEG00000014765 Ailuropoda melanoleuca ENSAMEG00000014765 N
ENSAMXG00000001377 Astyanax mexicanus ENSAMXG00000001377 N
ENSAMXG00000008897 Astyanax mexicanus ENSAMXG00000008897 N
ENSAPLG00000012534 Anas platyrhynchos ENSAPLG00000012534 N
ENSAPLG00000014050 Anas platyrhynchos ENSAPLG00000014050 N
ENSCSAG00000008567 Chlorocebus sabaeus ENSCSAG00000008567 N
ENSCSAG00000014652 Chlorocebus sabaeus ENSCSAG00000014652 N
ENSCSAVG00000003790 Ciona savignyi ENSCSAVG00000003790 N
ENSDORG00000008569 Dipodomys ordii ENSDORG00000008569 N
ENSFALG00000005247 Ficedula albicollis ENSFALG00000005247 N
ENSGMOG00000006637 Gadus morhua ENSGMOG00000006637 N
ENSGMOG00000018211 Gadus morhua ENSGMOG00000018211 N
ENSLACG00000012873 Latimeria chalumnae ENSLACG00000012873 N
ENSLACG00000015924 Latimeria chalumnae ENSLACG00000015924 N
ENSLOCG00000005059 Lepisosteus oculatus ENSLOCG00000005059 N
ENSLOCG00000016561 Lepisosteus oculatus ENSLOCG00000016561 N
ENSMEUG00000011682 Macropus eugenii ENSMEUG00000011682 N
ENSMMUG00000015564 Macaca mulatta ENSMMUG00000015564 N
ENSMPUG00000001668 Mustela putorius furo ENSMPUG00000001668 N
ENSMPUG00000008240 Mustela putorius furo ENSMPUG00000008240 N
ENSNLEG00000004481 Nomascus leucogenys ENSNLEG00000004481 N
ENSNLEG00000013870 Nomascus leucogenys ENSNLEG00000013870 N
ENSOARG00000011739 Ovis aries ENSOARG00000011739 N
ENSOARG00000014072 Ovis aries ENSOARG00000014072 N
ENSONIG00000014696 Oreochromis niloticus ENSONIG00000014696 N
ENSONIG00000016544 Oreochromis niloticus ENSONIG00000016544 N
ENSONIG00000017476 Oreochromis niloticus ENSONIG00000017476 I
ENSORLG00000005403 Oryzias latipes ENSORLG00000005403 I
ENSP00000262901 Macaca fascicularis ENSP00000262901 N
ENSP00000290399 Macaca fascicularis ENSP00000290399 N
ENSP00000290399-D1 Bos grunniens ENSP00000290399-D1 N
ENSP00000358210-D1 Bos grunniens ENSP00000358210-D1 N
ENSPANG00000011218 Papio anubis ENSPANG00000011218 N
ENSPANG00000020491 Papio anubis ENSPANG00000020491 N
ENSPFOG00000002603 Poecilia formosa ENSPFOG00000002603 N
ENSPPYG00000011405 Pongo abelii ENSPPYG00000011405 N
ENSPPYG00000016868 Pongo abelii ENSPPYG00000016868 N
ENSPSIG00000002579 Pelodiscus sinensis ENSPSIG00000002579 N
ENSSHAG00000009425 Sarcophilus harrisii ENSSHAG00000009425 N
ENSSHAG00000016220 Sarcophilus harrisii ENSSHAG00000016220 N
ENSSTOG00000027359 Ictidomys tridecemlineatus ENSSTOG00000027359 N
ENSTNIG00000019722 Tetraodon nigroviridis ENSTNIG00000019722 N
ENSTSYG00000005255 Tarsius syrichta ENSTSYG00000005255 N
ENSTSYG00000007116 Tarsius syrichta ENSTSYG00000007116 N
ENSXMAG00000016785 Xiphophorus maculatus ENSXMAG00000016785 N
ENSXMAG00000019075 Xiphophorus maculatus ENSXMAG00000019075 N
estExt_GenewiseH_1.C_790104 Branchiostoma floridae estExt_GenewiseH_1.C_790104 N
Gfo_R003852 Geospiza fortis Gfo_R003852 N
Gfo_R010900 Geospiza fortis Gfo_R010900 N
HelroG89969 Helobdella robusta HelroG89969 N
HMEL008134 Heliconius melpomene HMEL008134 I
KGM_03494 Danaus plexippus KGM_03494 I
L798_01260 Zootermopsis nevadensis L798_01260 N
LCUP006648 Lucilia cuprina LCUP006648 I
LotgiG106747 Lottia gigantea LotgiG106747 N
MDOA008891 Musca domestica MDOA008891 I
Myotis_brandtii_SIM1_10034719 Myotis brandtii Myotis_brandtii_SIM1_10034719 N
Ocbimv22031168m.g Octopus bimaculoides Ocbimv22031168m.g N
Ogr12757 Ophisaurus gracilis Ogr12757 N
PHUM080130 Pediculus humanus PHUM080130 N
Pvit_04770 Pogona vitticeps Pvit_04770 N
Pvit_09298 Pogona vitticeps Pvit_09298 N
PXEA_0002490601 Protopolystoma xenopodis PXEA_0002490601 N
RPRC001595 Rhodnius prolixus RPRC001595 N
SIM1 Anolis carolinensis ENSACAG00000010256 N
SIM1 Bos taurus ENSBTAG00000002294 N
SIM1 Canis familiaris ENSCAFG00000003538 N
SIM1 Choloepus hoffmanni ENSCHOG00000005099 N
SIM1 Callithrix jacchus ENSCJAG00000001495 N
SIM1 Cavia porcellus ENSCPOG00000013987 N
SIM1 Dasypus novemcinctus ENSDNOG00000010261 N
SIM1 Equus caballus ENSECAG00000009161 N
SIM1 Erinaceus europaeus ENSEEUG00000009806 N
SIM1 Echinops telfairi ENSETEG00000010692 N
SIM1 Felis catus ENSFCAG00000005942 N
SIM1 Homo sapiens ENSG00000112246 N
SIM1 Gallus gallus ENSGALG00000015466 N
SIM1 Gorilla gorilla ENSGGOG00000017108 N
SIM1 Loxodonta africana ENSLAFG00000006594 N
SIM1 Microcebus murinus ENSMICG00000008851 N
SIM1 Myotis lucifugus ENSMLUG00000002874 N
SIM1 Macaca mulatta ENSMMUG00000022285 N
SIM1 Monodelphis domestica ENSMODG00000018087 N
Sim1 Mus musculus ENSMUSG00000019913 N
SIM1 Ornithorhynchus anatinus ENSOANG00000008943 N
SIM1 Oryctolagus cuniculus ENSOCUG00000002759 N
SIM1 Otolemur garnettii ENSOGAG00000009865 N
SIM1 Ochotona princeps ENSOPRG00000013168 N
SIM1 Procavia capensis ENSPCAG00000008763 N
SIM1 Pan troglodytes ENSPTRG00000018447 N
SIM1 Pteropus vampyrus ENSPVAG00000012822 N
Sim1 Rattus norvegicus ENSRNOG00000037600 N
SIM1 Sorex araneus ENSSARG00000000736 N
SIM1 Sus scrofa ENSSSCG00000004357 N
SIM1 Tupaia belangeri ENSTBEG00000005949 N
SIM1 Taeniopygia guttata ENSTGUG00000012278 N
SIM1 Takifugu rubripes ENSTRUG00000010040 N
SIM1 Tursiops truncatus ENSTTRG00000008248 N
SIM1 Vicugna pacos ENSVPAG00000001407 N
sim1 Xenopus tropicalis XB-GENE-485816 N
sim1a Danio rerio ENSDARG00000023316 N
sim1a Gasterosteus aculeatus ENSGACG00000014149 N
sim1b Danio rerio ENSDARG00000013789 N
sim1b Gasterosteus aculeatus ENSGACG00000009479 N
sim1b Tetraodon nigroviridis ENSTNIG00000012304 N
sim1b Takifugu rubripes ENSTRUG00000018267 N
SIM2 Anolis carolinensis ENSACAG00000008765 N
SIM2 Canis familiaris ENSCAFG00000009686 N
SIM2 Callithrix jacchus ENSCJAG00000002704 N
SIM2 Cavia porcellus ENSCPOG00000023156 N
SIM2 Dasypus novemcinctus ENSDNOG00000003669 N
Sim2 Dipodomys ordii ENSDORG00000011548 N
SIM2 Equus caballus ENSECAG00000016631 N
SIM2 Echinops telfairi ENSETEG00000012055 N
SIM2 Felis catus ENSFCAG00000023063 N
SIM2 Homo sapiens ENSG00000159263 N
SIM2 Gallus gallus ENSGALG00000016044 N
SIM2 Gorilla gorilla ENSGGOG00000014943 N
SIM2 Loxodonta africana ENSLAFG00000000122 N
SIM2 Microcebus murinus ENSMICG00000013168 N
SIM2 Monodelphis domestica ENSMODG00000021008 N
Sim2 Mus musculus ENSMUSG00000062713 N
SIM2 Oryctolagus cuniculus ENSOCUG00000012903 N
SIM2 Otolemur garnettii ENSOGAG00000028990 N
SIM2 Procavia capensis ENSPCAG00000015289 N
SIM2 Pan troglodytes ENSPTRG00000013894 N
SIM2 Pteropus vampyrus ENSPVAG00000000853 N
Sim2 Rattus norvegicus ENSRNOG00000054203 N
SIM2 Taeniopygia guttata ENSTGUG00000004856 N
SIM2 Tursiops truncatus ENSTTRG00000017084 N
sim2.S Xenopus laevis XB-GENE-1013959 N
Sjc_0126700 Schistosoma japonicum Sjc_0126700 N
SMAR001482 Strigamia maritima SMAR001482 N
Smp_165270 Schistosoma mansoni Smp_165270 N
SMRZ_0000943001 Schistosoma margrebowiei SMRZ_0000943001 N
SMTD_0000610501 Schistosoma mattheei SMTD_0000610501 N
SMU15015785 Schmidtea mediterranea SMU15015785 N
SPU_013962 Strongylocentrotus purpuratus SPU_013962 N
SROB_0001806001 Schistosoma rodhaini SROB_0001806001 N
T265_14441 Opisthorchis viverrini T265_14441 N
Tal_R009812 Tyto alba Tal_R009812 N
tetur06g06010 Tetranychus urticae tetur06g06010 N
TRE_0000325801 Trichobilharzia regenti TRE_0000325801 N
XP_002941575 Xenopus tropicalis XP_002941575 N