RARB (Homo sapiens)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 ENSG00000077092 T303209_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RARB
M03355_2.00		 Homo sapiens
AAAGGTCAARAGGTCA
TGACCTYTTGACCTTT		 SELEX
Jolma et al.(2013)
RARB_1		 (Direct) (Direct)
RARB
M05563_2.00		 Homo sapiens
NHAAGGTCAN
NTGACCTTDN		 SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_1		 (Direct) (Direct)
RARB
M05564_2.00		 Homo sapiens
RRGGTCAARRGGTCAN
NTGACCYYTTGACCYY		 SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_2		 (Direct) (Direct)
RARB
M05565_2.00		 Homo sapiens
DAGGTCAYGACCYY
RRGGTCRTGACCTH		 SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_3		 (Direct) (Direct)
RARB
M05566_2.00		 Homo sapiens
NHRAGGTCAH
DTGACCTYDN		 SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_1		 (Direct) (Direct)
RARB
M05567_2.00		 Homo sapiens
RRGGTCAHRRGGTCAN
NTGACCYYDTGACCYY		 SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_2		 (Direct) (Direct)
RARB
M05568_2.00		 Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY		 SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_3		 (Direct) (Direct)
RARB
M11094_2.00		 Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NR1B2_Q6		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Rarb
M02401_2.00 		Mus musculus
NRRGGTCAHN
NDTGACCYYN		 PBM
Weirauch et al.(2014)
pTH2804 		0.990 1.000
Rarb
M03423_2.00 		Mus musculus
WAAGGTCAAAAGGTCA
TGACCTTTTGACCTTW		 SELEX
Jolma et al.(2013)
Rarb_1 		0.990 1.000
Rarb
M03424_2.00 		Mus musculus
RRAGGTCANBWRAGGTCA
TGACCTYWVNTGACCTYY		 SELEX
Jolma et al.(2013)
Rarb_2 		0.990 1.000
Rarb
M03425_2.00 		Mus musculus
AGGTCAHVBWRAGGTCA
TGACCTYWVBDTGACCT		 SELEX
Jolma et al.(2013)
Rarb_3 		0.990 1.000
RARA
M03369_2.00 		Homo sapiens
RRAGGTCAWBWRRGGTCA
TGACCYYWVWTGACCTYY		 SELEX
Jolma et al.(2013)
RARA_1 		0.990 0.971
RARA
M03370_2.00 		Homo sapiens
RAGGTCAAAAGGTCAWKB
VMWTGACCTTTTGACCTY		 SELEX
Jolma et al.(2013)
RARA_2 		0.990 0.971
RARA
M03371_2.00 		Homo sapiens
AGGTCAHNYWRAGGTCA
TGACCTYWRNDTGACCT		 SELEX
Jolma et al.(2013)
RARA_3 		0.990 0.971
RARA
M03372_2.00 		Homo sapiens
ARGGTCAAAAGGTCA
TGACCTTTTGACCYT		 SELEX
Jolma et al.(2013)
RARA_4 		0.990 0.971
RARA
M03373_2.00 		Homo sapiens
WRRGGTCAHSHRRGGTCA
TGACCYYDSDTGACCYYW		 SELEX
Jolma et al.(2013)
RARA_5 		0.990 0.971
RARA
M03374_2.00 		Homo sapiens
AGGTCAWNNARAGGTCA
TGACCTYTNNWTGACCT		 SELEX
Jolma et al.(2013)
RARA_6 		0.990 0.971
RARA
M05607_2.00 		Homo sapiens
NVGGKCANNRGGKCAN
NTGMCCYNNTGMCCBN		 SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_1 		0.990 0.971
RARA
M05608_2.00 		Homo sapiens
NVGGKCAYGNCCBN
NVGGNCRTGMCCBN		 SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_2 		0.990 0.971
RARA
M05609_2.00 		Homo sapiens
NRRGGTCANV
BNTGACCYYN		 SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_3 		0.990 0.971
RARA
M05878_2.00 		Homo sapiens
RAGGTCA
TGACCTY		 SMiLE-seq
Isakova et al.(2017)
RARa 		0.990 0.971
RARA
M09277_2.00 		Homo sapiens
RRRDVDBSNDRAGKTCARGG
CCYTGAMCTYHNSVHBHYYY		 Misc
Kulakovskiy et al.(2013)
RARA_HUMAN.H11MO.0.A 		0.990 0.971
RARA
M11137_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NR1B1_Q6 		0.990 0.971
RARA
M05610_2.00 		Homo sapiens
DRGGKCRNDRGGTCRN
NYGACCYHNYGMCCYH		 SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_1 		0.990 0.971
RARA
M05611_2.00 		Homo sapiens
NVGGTCAYGMCCYN
NRGGKCRTGACCBN		 SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_2 		0.990 0.971
RARA
M05612_2.00 		Homo sapiens
NRAGGTCANN
NNTGACCTYN		 SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_3 		0.990 0.971
Rara
M00185_2.00 		Mus musculus
NRGGTCAN
NTGACCYN		 PBM
Badis et al.(2009)
Rara_1051 		0.990 0.957
Rara
M03432_2.00 		Mus musculus
AAAGGTCAHBVRAGGTCA
TGACCTYBVDTGACCTTT		 SELEX
Jolma et al.(2013)
Rara_1 		0.990 0.957
Rara
M03433_2.00 		Mus musculus
AGGTCAHNHAAAGGTCA
TGACCTTTDNDTGACCT		 SELEX
Jolma et al.(2013)
Rara_2 		0.990 0.957
Rara
M03434_2.00 		Mus musculus
RAGGTCAAAAGGTCA
TGACCTTTTGACCTY		 SELEX
Jolma et al.(2013)
Rara_3 		0.990 0.957
Rara
M09329_2.00 		Mus musculus
RGRTCRDRAGKTCAAGGTCA
TGACCTTGAMCTYHYGAYCY		 Misc
Kulakovskiy et al.(2013)
RARA_MOUSE.H11MO.0.A 		0.990 0.957
RARG
M02397_2.00 		Homo sapiens
VGGTCANN
NNTGACCB		 PBM
Weirauch et al.(2014)
pTH5430 		0.987 0.943
Rarg
M00810_2.00 		Mus musculus
NNVGKTCANN
NNTGAMCBNN		 PBM
Weirauch et al.(2013)
pTH4269 		0.987 0.943
RARG
M03391_2.00 		Homo sapiens
SRGGTCAAAAGGTCAVD
HBTGACCTTTTGACCYS		 SELEX
Jolma et al.(2013)
RARG_1 		0.987 0.943
RARG
M03392_2.00 		Homo sapiens
RAGGTCAHVHWRAGGTCA
TGACCTYWDBDTGACCTY		 SELEX
Jolma et al.(2013)
RARG_2 		0.987 0.943
RARG
M03393_2.00 		Homo sapiens
RRGGTCAHNNRAGGTCA
TGACCTYNNDTGACCYY		 SELEX
Jolma et al.(2013)
RARG_3 		0.987 0.943
RARG
M03394_2.00 		Homo sapiens
GAGGTCAAAAGGTCAY
RTGACCTTTTGACCTC		 SELEX
Jolma et al.(2013)
RARG_4 		0.987 0.943
RARG
M03395_2.00 		Homo sapiens
RAGGTCAABYARRGKTCA
TGAMCYYTRVTTGACCTY		 SELEX
Jolma et al.(2013)
RARG_5 		0.987 0.943
RARG
M03396_2.00 		Homo sapiens
RAGGTCAHBNVRGGTCA
TGACCYBNVDTGACCTY		 SELEX
Jolma et al.(2013)
RARG_6 		0.987 0.943
Rarg
M03416_2.00 		Mus musculus
RRGGTCAAAAGGTCAH
DTGACCTTTTGACCYY		 SELEX
Jolma et al.(2013)
Rarg_1 		0.987 0.943
Rarg
M03417_2.00 		Mus musculus
RAGGTCAWVHAAAGGTCA
TGACCTTTDBWTGACCTY		 SELEX
Jolma et al.(2013)
Rarg_2 		0.987 0.943
Rarg
M03418_2.00 		Mus musculus
AAGGTCAHSARAGGTCA
TGACCTYTSDTGACCTT		 SELEX
Jolma et al.(2013)
Rarg_3 		0.987 0.943
RARG
M05653_2.00 		Homo sapiens
NRGGTCANV
BNTGACCYN		 SELEX
Yin et al.(2017)
RARG_FL_HT-SELEX 		0.987 0.943
RARG
M05649_2.00 		Homo sapiens
DRGGTCAAAAGKTCAN
NTGAMCTTTTGACCYH		 SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_1 		0.987 0.943
RARG
M05650_2.00 		Homo sapiens
RAGGTCATGACCTH
DAGGTCATGACCTY		 SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_2 		0.987 0.943
Rarg
M05885_2.00 		Mus musculus
NRGGTCANDRGKKYA
TRMMCYHNTGACCYN		 SMiLE-seq
Isakova et al.(2017)
RARg 		0.987 0.943
RARG
M09289_2.00 		Homo sapiens
RGGTCAVVVWGNMMNNDV
BHNNKKNCWBBBTGACCY		 Misc
Kulakovskiy et al.(2013)
RARG_HUMAN.H11MO.0.B 		0.987 0.943
Rarg
M09300_2.00 		Mus musculus
RGGTCAVVVWGNMMNNDV
BHNNKKNCWBBBTGACCY		 Misc
Kulakovskiy et al.(2013)
RARG_MOUSE.H11MO.0.C 		0.987 0.943
Rarg
M09613_2.00 		Mus musculus
RGKTCAAGGBCA
TGVCCTTGAMCY		 Misc
Heinz et al.(2010)
ES-RARg_GSE30538 		0.987 0.943
RARG
M11167_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RARG_Q3 		0.987 0.943
RARG
M05654_2.00 		Homo sapiens
NRGGTCRNV
BNYGACCYN		 SELEX
Yin et al.(2017)
RARG_FL_Methyl-HT-SELEX 		0.987 0.943
RARG
M05651_2.00 		Homo sapiens
DRGGTCAARRGGTCRN
NYGACCYYTTGACCYH		 SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_1 		0.987 0.943
RARG
M05652_2.00 		Homo sapiens
DAGKTCRYGACCYY
RRGGTCRYGAMCTH		 SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_2 		0.987 0.943
AAEL009588
M02388_2.00 		Aedes aegypti
NRGGTCR
YGACCYN		 PBM
Weirauch et al.(2014)
pTH5508 		0.974 0.657
Hr46
M02406_2.00 		Drosophila melanogaster
NRGGTCAN
NTGACCYN		 PBM
Weirauch et al.(2014)
pTH6142 		0.974 0.657
Hr46
M03926_2.00 		Drosophila melanogaster
RGGTCAGTRGGTCA
TGACCYACTGACCY		 SELEX
Nitta et al.(2015)
Hr46_1 		0.974 0.657
Hr46
M06412_2.00 		Drosophila melanogaster
AWKTGGGTYW
WRACCCAMWT		 B1H
Zhu et al.(2011)
Hr46_FlyReg_FBgn0000448 		0.974 0.657
Hr46
M06413_2.00 		Drosophila melanogaster
HWNBAGGTCA
TGACCTVNWD		 B1H
Zhu et al.(2011)
Hr46_SANGER_5_FBgn0000448 		0.974 0.657
Eip75B
M03928_2.00 		Drosophila melanogaster
MWVTAGGTCANN
NNTGACCTABWK		 SELEX
Nitta et al.(2015)
Eip75B_1 		0.968 0.614
Eip75B
M03929_2.00 		Drosophila melanogaster
AWNTRGGTCANTRGGTCA
TGACCYANTGACCYANWT		 SELEX
Nitta et al.(2015)
Eip75B_2 		0.968 0.614
Eip75B
M06416_2.00 		Drosophila melanogaster
KWWNTRGGTCA
TGACCYANWWM		 B1H
Zhu et al.(2011)
Eip75B_SANGER_5_FBgn0000568 		0.968 0.614
Rorc
M09324_2.00 		Mus musculus
NDAWSTRRGTCA
TGACYYASWTHN		 Misc
Kulakovskiy et al.(2013)
RORG_MOUSE.H11MO.0.B 		0.968 0.643
Rorc
M09617_2.00 		Mus musculus
AWBTRGGTCA
TGACCYAVWT		 Misc
Heinz et al.(2010)
EL4-RORgt.Flag_GSE56019 		0.968 0.643
Rora
M00819_2.00 		Mus musculus
NNRGGTCA
TGACCYNN		 PBM
Weirauch et al.(2013)
pTH3464 		0.967 0.671
RORA
M03353_2.00 		Homo sapiens
NMRAGGTCAAVYYVAGGTCA
TGACCTBRRBTTGACCTYKN		 SELEX
Jolma et al.(2013)
RORA_1 		0.967 0.671
RORA
M03354_2.00 		Homo sapiens
WAWSTRGGTYASTAGGTCA
TGACCTASTRACCYASWTW		 SELEX
Jolma et al.(2013)
RORA_2 		0.967 0.671
RORA
M02705_2.00 		Homo sapiens
WWVDAGGTCA
TGACCTHBWW		 SELEX
Mathelier et al.(2014)
MA0071.1 		0.967 0.671
RORA
M02706_2.00 		Homo sapiens
NDWAWBTAGGTCAN
NTGACCTAVWTWHN		 SELEX
Mathelier et al.(2014)
MA0072.1 		0.967 0.671
RORA
M09265_2.00 		Homo sapiens
VWNDRGGBCARDR
YHYTGVCCYHNWB		 Misc
Kulakovskiy et al.(2013)
RORA_HUMAN.H11MO.0.C 		0.967 0.671
Rora
M09327_2.00 		Mus musculus
VWNDRGGBCARDR
YHYTGVCCYHNWB		 Misc
Kulakovskiy et al.(2013)
RORA_MOUSE.H11MO.0.C 		0.967 0.671
RORA
M11090_2.00 		Homo sapiens
DWWWVDAGGTCAH
DTGACCTHBWWWH		 Transfac
Matys et al.(2006)
V$RORA1_01 		0.967 0.671
RORA
M11091_2.00 		Homo sapiens
DWAWBTAGGTCAN
NTGACCTAVWTWH		 Transfac
Matys et al.(2006)
V$RORA2_01 		0.967 0.671
RORA
M11092_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORALPHA_Q4 		0.967 0.671
RORA
M11093_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORA_Q4 		0.967 0.671
Eip78C
M06427_2.00 		Drosophila melanogaster
RGGTCA
TGACCY		 B1H
Zhu et al.(2011)
Eip78C_SANGER_5_FBgn0004865 		0.966 0.643
Rorb
M00820_2.00 		Mus musculus
NRGGTCANN
NNTGACCYN		 PBM
Weirauch et al.(2013)
pTH3469 		0.965 0.643
rorb
M02404_2.00 		Tetraodon nigroviridis
NGAGGTCANN
NNTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6589 		0.965 0.643
RORB
M05677_2.00 		Homo sapiens
DAWNTRGGTYAGTRGGTCAN
NTGACCYACTRACCYANWTH		 SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_1 		0.965 0.643
RORB
M05678_2.00 		Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN		 SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_2 		0.965 0.643
RORB
M05883_2.00 		Homo sapiens
AWNBRGGTCAN
NTGACCYVNWT		 SMiLE-seq
Isakova et al.(2017)
RORb 		0.965 0.643
RORB
M11187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORBETA_Q2 		0.965 0.643
RORB
M05679_2.00 		Homo sapiens
DAWBTRGGTYAGTRGGTCRN
NYGACCYACTRACCYAVWTH		 SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_1 		0.965 0.643
RORB
M05680_2.00 		Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN		 SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_2 		0.965 0.643
sex-1
M02416_2.00 		Caenorhabditis elegans
RAGGTCAH
DTGACCTY		 PBM
Weirauch et al.(2014)
pTH5667 		0.964 0.614
Nr2c1
M00812_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Weirauch et al.(2013)
pTH1284 		0.963 0.629
Nr2c1
M02399_2.00 		Mus musculus
RRGGTCAH
DTGACCYY		 PBM
Weirauch et al.(2014)
pTH3466 		0.963 0.629
Nr2c1
M09304_2.00 		Mus musculus
RBYVRVAGGTCAB
VTGACCTBYBRVY		 Misc
Kulakovskiy et al.(2013)
NR2C1_MOUSE.H11MO.0.C 		0.963 0.629
NR2C1
M05597_2.00 		Homo sapiens
NRGKKCRYGAMMYN
NRKKTCRYGMMCYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_1 		0.963 0.614
NR2C1
M05598_2.00 		Homo sapiens
NRRGGTCAN
NTGACCYYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_2 		0.963 0.614
NR2C1
M09273_2.00 		Homo sapiens
RBYVRVAGGTCAB
VTGACCTBYBRVY		 Misc
Kulakovskiy et al.(2013)
NR2C1_HUMAN.H11MO.0.C 		0.963 0.614
NR2C1
M05599_2.00 		Homo sapiens
NRRGGTCAN
NTGACCYYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_1 		0.963 0.614
NR2C1
M05600_2.00 		Homo sapiens
RRGGTCRYGACCYY
RRGGTCRYGACCYY		 SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_2 		0.963 0.614
CBG17178
M02392_2.00 		Caenorhabditis briggsae
RAGGTCAH
DTGACCTY		 PBM
Weirauch et al.(2014)
pTH6634 		0.963 0.600
Smp_105090
M02412_2.00 		Schistosoma mansoni
RGGTCANN
NNTGACCY		 PBM
Weirauch et al.(2014)
pTH6174 		0.961 0.629
RORC
M05621_2.00 		Homo sapiens
KRGGTCAYGMCCYM
KRGGKCRTGACCYM		 SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_1 		0.960 0.629
RORC
M05622_2.00 		Homo sapiens
NAWNKRGGTYANTRGGTCAN
NTGACCYANTRACCYMNWTN		 SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_2 		0.960 0.629
RORC
M05880_2.00 		Homo sapiens
NDAWNTRGGKCA
TGMCCYANWTHN		 SMiLE-seq
Isakova et al.(2017)
RORc 		0.960 0.629
RORC
M09282_2.00 		Homo sapiens
NDAWSTRRGTCA
TGACYYASWTHN		 Misc
Kulakovskiy et al.(2013)
RORG_HUMAN.H11MO.0.C 		0.960 0.629
RORC
M05623_2.00 		Homo sapiens
TRGGTCAYGACCYA
TRGGTCRTGACCYA		 SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_1 		0.960 0.629
RORC
M05624_2.00 		Homo sapiens
NAWNTRGGTYASTAGGTCAN
NTGACCTASTRACCYANWTN		 SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_2 		0.960 0.629
RORC
M02405_2.00 		Tetraodon nigroviridis
NGAGGTCANN
NNTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6612 		0.957 0.614
O77476_BRUPA
M02422_2.00 		Brugia pahangi
NRGGTCAN
NTGACCYN		 PBM
Weirauch et al.(2014)
pTH6019 		0.945 0.571
NR2C2
M03407_2.00 		Homo sapiens
VRGGTCAAAGGTCA
TGACCTTTGACCYB		 SELEX
Jolma et al.(2013)
NR2C2_1 		0.944 0.586
NR2C2
M05669_2.00 		Homo sapiens
NRGGTCRN
NYGACCYN		 SELEX
Yin et al.(2017)
NR2C2_eDBD_HT-SELEX 		0.944 0.586
NR2C2
M08156_2.00 		Homo sapiens
NVRGGTCARAGGKCA
TGMCCTYTGACCYBN		 ChIP-seq
Mathelier et al.(2014)
MA0504.1 		0.944 0.586
NR2C2
M07990_2.00 		Homo sapiens
WBYRCTTCCGGGKYV
BRMCCCGGAAGYRVW		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_TR4_UCD 		0.944 0.586
NR2C2
M07991_2.00 		Homo sapiens
DWBYRCTTCCGGGKY
RMCCCGGAAGYRVWH		 ChIP-seq
Gerstein et al.(2012)
HepG2b_TR4_UCD 		0.944 0.586
NR2C2
M07992_2.00 		Homo sapiens
WBYRCTTCCGGGKYR
YRMCCCGGAAGYRVW		 ChIP-seq
Gerstein et al.(2012)
K562b_TR4_UCD 		0.944 0.586
NR2C2
M08221_2.00 		Homo sapiens
DWBYDCTTCCGGGKY
RMCCCGGAAGHRVWH		 ChIP-seq
Contrino et al.(2012)
Mv97 		0.944 0.586
NR2C2
M08222_2.00 		Homo sapiens
TCARAGGTCA
TGACCTYTGA		 ChIP-seq
Contrino et al.(2012)
Mv98 		0.944 0.586
NR2C2
M09292_2.00 		Homo sapiens
RBTYMVRGGTCR
YGACCYBKRAVY		 Misc
Kulakovskiy et al.(2013)
NR2C2_HUMAN.H11MO.0.B 		0.944 0.586
Nr2c2
M09303_2.00 		Mus musculus
RRGKSARAGGKCA
TGMCCTYTSMCYY		 Misc
Kulakovskiy et al.(2013)
NR2C2_MOUSE.H11MO.0.A 		0.944 0.586
NR2C2
M09611_2.00 		Homo sapiens
RRGGTCARAGGTCA
TGACCTYTGACCYY		 Misc
Heinz et al.(2010)
Hela-TR4_GSE24685 		0.944 0.586
NR2C2
M11173_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NR2C2_03 		0.944 0.586
NR2C2
M11174_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NR2C2_04 		0.944 0.586
NR2C2
M11175_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TR4_01 		0.944 0.586
NR2C2
M11176_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TR4_03 		0.944 0.586
NR2C2
M11177_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TR4_Q2_01 		0.944 0.586
NR2C2
M11178_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TR4_Q2 		0.944 0.586
NR2C2
M11179_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TR4_Q3 		0.944 0.586
NR2C2
M05670_2.00 		Homo sapiens
NRGGTCRN
NYGACCYN		 SELEX
Yin et al.(2017)
NR2C2_eDBD_Methyl-HT-SELEX 		0.944 0.586
nr2f2
M02393_2.00 		Danio rerio
NNRGGTCAN
NTGACCYNN		 PBM
Weirauch et al.(2014)
pTH5882 		0.942 0.571
Nr2f1
M00822_2.00 		Mus musculus
DRGGTCRN
NYGACCYH		 PBM
Weirauch et al.(2013)
pTH3811 		0.942 0.571
NR2F1
M03403_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F1_1 		0.942 0.571
NR2F1
M03404_2.00 		Homo sapiens
RRGGTCAARAGGTCAN
NTGACCTYTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F1_2 		0.942 0.571
NR2F1
M03405_2.00 		Homo sapiens
RRGGTCAN
NTGACCYY		 SELEX
Jolma et al.(2013)
NR2F1_3 		0.942 0.571
NR2F1
M03406_2.00 		Homo sapiens
NHRRGGTCANVNG
CNBNTGACCYYDN		 SELEX
Jolma et al.(2013)
NR2F1_4 		0.942 0.571
NR2F1
M05661_2.00 		Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_1 		0.942 0.571
NR2F1
M05662_2.00 		Homo sapiens
VRGGTCANYGACCYY
RRGGTCRNTGACCYB		 SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_2 		0.942 0.571
NR2F1
M05665_2.00 		Homo sapiens
VRGGTCAAAGGTCAN
NTGACCTTTGACCYB		 SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_1 		0.942 0.571
NR2F1
M05666_2.00 		Homo sapiens
RRGGTCANYGACCYY
RRGGTCRNTGACCYY		 SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_2 		0.942 0.571
NR2F1
M09291_2.00 		Homo sapiens
NRRRBSRRRGGKCANVN
NBNTGMCCYYYSVYYYN		 Misc
Kulakovskiy et al.(2013)
COT1_HUMAN.H11MO.0.C 		0.942 0.571
Nr2f1
M09334_2.00 		Mus musculus
YARAGGTCA
TGACCTYTR		 Misc
Kulakovskiy et al.(2013)
COT1_MOUSE.H11MO.0.B 		0.942 0.571
NR2F1
M11172_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COUPTF1_Q6_01 		0.942 0.571
NR2F1
M05663_2.00 		Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_1 		0.942 0.571
NR2F1
M05664_2.00 		Homo sapiens
NRGGTCANYGACCYH
DRGGTCRNTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_2 		0.942 0.571
NR2F1
M05667_2.00 		Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_1 		0.942 0.571
NR2F1
M05668_2.00 		Homo sapiens
RRGGTCRNYGACCYY
RRGGTCRNYGACCYY		 SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_2 		0.942 0.571
NR2F6
M02396_2.00 		Homo sapiens
NNRGGTCR
YGACCYNN		 PBM
Weirauch et al.(2014)
pTH6747 		0.942 0.614
NR2F6
M03386_2.00 		Homo sapiens
RRGGTCAAAAGGTCA
TGACCTTTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F6_1 		0.942 0.614
NR2F6
M03387_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F6_2 		0.942 0.614
NR2F6
M03388_2.00 		Homo sapiens
NRGGTCAAAGGTCA
TGACCTTTGACCYN		 SELEX
Jolma et al.(2013)
NR2F6_3 		0.942 0.614
NR2F6
M05641_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_1 		0.942 0.614
NR2F6
M05642_2.00 		Homo sapiens
RAGGTCANTGACCTY
RAGGTCANTGACCTY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_2 		0.942 0.614
NR2F6
M05645_2.00 		Homo sapiens
NRGGTCARAGGTCRN
NYGACCTYTGACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_1 		0.942 0.614
NR2F6
M05646_2.00 		Homo sapiens
NRGGTCANYGACCYY
RRGGTCRNTGACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_2 		0.942 0.614
NR2F6
M11153_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EAR2_Q2 		0.942 0.614
NR2F6
M11154_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EAR2_Q4 		0.942 0.614
NR2F6
M05643_2.00 		Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_1 		0.942 0.614
NR2F6
M05644_2.00 		Homo sapiens
RRGGTCRNYGACCYY
RRGGTCRNYGACCYY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_2 		0.942 0.614
NR2F6
M05647_2.00 		Homo sapiens
NRGGTYADRGGKBRN
NYVMCCYHTRACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_1 		0.942 0.614
NR2F6
M05648_2.00 		Homo sapiens
NRGGTCANYGACCYN
NRGGTCRNTGACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_2 		0.942 0.614
Nr2f2
M00184_2.00 		Mus musculus
RRGGTCAN
NTGACCYY		 PBM
Badis et al.(2009)
Nr2f2_2192 		0.941 0.571
NR2F2
M08157_2.00 		Homo sapiens
NNAAGGTCANN
NNTGACCTTNN		 ChIP-seq
Mathelier et al.(2014)
MA1111.1 		0.941 0.571
NR2F2
M08223_2.00 		Homo sapiens
AAAGGTCA
TGACCTTT		 ChIP-seq
Contrino et al.(2012)
Mv102 		0.941 0.571
NR2F2
M08224_2.00 		Homo sapiens
GGKCARAGGB
VCCTYTGMCC		 ChIP-seq
Contrino et al.(2012)
Mv104 		0.941 0.571
NR2F2
M09293_2.00 		Homo sapiens
NARRGGTCADRDN
NHYHTGACCYYTN		 Misc
Kulakovskiy et al.(2013)
COT2_HUMAN.H11MO.0.A 		0.941 0.571
Nr2f2
M09325_2.00 		Mus musculus
NNHRAGGTCANVD
HBNTGACCTYDNN		 Misc
Kulakovskiy et al.(2013)
COT2_MOUSE.H11MO.0.A 		0.941 0.571
NR2F2
M11180_2.00 		Homo sapiens
WRRKKTCAARGGYTCA
TGARCCYTTGAMMYYW		 Transfac
Matys et al.(2006)
V$ARP1_01 		0.941 0.571
NR2F2
M11181_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COUPTF2_Q6 		0.941 0.571
svp
M06423_2.00 		Drosophila melanogaster
ARGGTCA
TGACCYK		 B1H
Zhu et al.(2011)
svp_SANGER_5_FBgn0003651 		0.939 0.543
PPARD
M05581_2.00 		Homo sapiens
NRRGGTCAAAGGTCAN
NTGACCTTTGACCYYN		 SELEX
Yin et al.(2017)
PPARD_eDBD_HT-SELEX_1 		0.938 0.586
PPARD
M05582_2.00 		Homo sapiens
HRRGGTCAYGACCYYD
HRRGGTCRTGACCYYD		 SELEX
Yin et al.(2017)
PPARD_eDBD_HT-SELEX_2 		0.938 0.586
PPARD
M05583_2.00 		Homo sapiens
NRRGGTCAAAGGTCRN
NYGACCTTTGACCYYN		 SELEX
Yin et al.(2017)
PPARD_eDBD_Methyl-HT-SELEX_1 		0.938 0.586
PPARD
M05584_2.00 		Homo sapiens
NRRGGTCRCGACCYYN
NRRGGTCGYGACCYYN		 SELEX
Yin et al.(2017)
PPARD_eDBD_Methyl-HT-SELEX_2 		0.938 0.586
PPARA
M09295_2.00 		Homo sapiens
NWSTRGGBSARAGGKBA
TVMCCTYTSVCCYASWN		 Misc
Kulakovskiy et al.(2013)
PPARA_HUMAN.H11MO.0.B 		0.931 0.586
Ppara
M09314_2.00 		Mus musculus
HWSTRGGBSARAGGKBA
TVMCCTYTSVCCYASWD		 Misc
Kulakovskiy et al.(2013)
PPARA_MOUSE.H11MO.0.A 		0.931 0.586
PPARA
M11183_2.00 		Homo sapiens
CWRAWCYAGGNCAWAGKTCA
TGAMCTWTGNCCTRGWTYWG		 Transfac
Matys et al.(2006)
V$PPARA_01 		0.931 0.586
PPARA
M11184_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PPARA_Q6 		0.931 0.586
Pparg
M05884_2.00 		Mus musculus
HWNTRGGKYANB
VNTRMCCYANWD		 SMiLE-seq
Isakova et al.(2017)
PPARg 		0.920 0.600
PPARG
M02707_2.00 		Homo sapiens
STRGGTCANNDTGACCYANW
WNTRGGTCAHNNTGACCYAS		 SELEX
Mathelier et al.(2014)
MA0066.1 		0.920 0.600
PPARG
M09278_2.00 		Homo sapiens
VWSKRGGKSARAGGKSA
TSMCCTYTSMCCYMSWB		 Misc
Kulakovskiy et al.(2013)
PPARG_HUMAN.H11MO.0.A 		0.920 0.600
Pparg
M09299_2.00 		Mus musculus
HWBTRGGBSARAGGKNA
TNMCCTYTSVCCYAVWD		 Misc
Kulakovskiy et al.(2013)
PPARG_MOUSE.H11MO.0.A 		0.920 0.600
Pparg
M09612_2.00 		Mus musculus
TRGGNCARAGGKCA
TGMCCTYTGNCCYA		 Misc
Heinz et al.(2010)
3T3L1-Pparg_GSE13511 		0.920 0.600
PPARG
M11138_2.00 		Homo sapiens
NNDRRGGTCAAAGGTCAHVND
HNBDTGACCTTTGACCYYHNN		 Transfac
Matys et al.(2006)
V$PPARG_01 		0.920 0.600
PPARG
M11139_2.00 		Homo sapiens
AWBTRGGTCACNDTGACCTASTT
AASTAGGTCAHNGTGACCYAVWT		 Transfac
Matys et al.(2006)
V$PPARG_02 		0.920 0.600
PPARG
M11140_2.00 		Homo sapiens
WWBHRGGNYAAAGKTCA
TGAMCTTTRNCCYDVWW		 Transfac
Matys et al.(2006)
V$PPARG_03 		0.920 0.600
PPARG
M11141_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PPARG_Q6 		0.920 0.600
Q969A9_BOMMO
M02410_2.00 		Bombyx mori
VRGGTCDN
NHGACCYB		 PBM
Weirauch et al.(2014)
pTH5516 		0.920 0.514
Rxrg
M02400_2.00 		Mus musculus
VRGGTCAN
NTGACCYB		 PBM
Weirauch et al.(2014)
pTH2880 		0.917 0.600
RXRG
M03375_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRG_1 		0.917 0.600
RXRG
M03376_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRG_2 		0.917 0.600
RXRG
M03377_2.00 		Homo sapiens
GRGGTCAAAGGTCA
TGACCTTTGACCYC		 SELEX
Jolma et al.(2013)
RXRG_3 		0.917 0.600
RXRG
M03378_2.00 		Homo sapiens
NRGGTCATGACCYC
GRGGTCATGACCYN		 SELEX
Jolma et al.(2013)
RXRG_4 		0.917 0.600
RXRG
M02746_2.00 		Homo sapiens
GGTCAAAGGTCA
TGACCTTTGACC		 SELEX
Jolma et al.(2010)
RXRG_dimer 		0.917 0.600
RXRG
M05615_2.00 		Homo sapiens
VRGGTCAAAGGTCAN
NTGACCTTTGACCYB		 SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_1 		0.917 0.600
RXRG
M05616_2.00 		Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY		 SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_2 		0.917 0.600
RXRG
M05879_2.00 		Homo sapiens
RGGTBAARGGTBRND
HNYVACCYTTVACCY		 SMiLE-seq
Isakova et al.(2017)
RXRg 		0.917 0.600
RXRG
M09280_2.00 		Homo sapiens
NGTCAAAGGTCAH
DTGACCTTTGACN		 Misc
Kulakovskiy et al.(2013)
RXRG_HUMAN.H11MO.0.B 		0.917 0.600
Rxrg
M09305_2.00 		Mus musculus
VDDVDNSVNRAGKTCAAGGYCA
TGRCCTTGAMCTYNBSNHBHHB		 Misc
Kulakovskiy et al.(2013)
RXRG_MOUSE.H11MO.0.B 		0.917 0.600
RXRG
M05617_2.00 		Homo sapiens
DRGGTBAARGGTBRN
NYVACCYTTVACCYH		 SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_1 		0.917 0.600
RXRG
M05618_2.00 		Homo sapiens
VRGGTCAYGACCYB
VRGGTCRTGACCYB		 SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_2 		0.917 0.600
Nr2f6
M00811_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Weirauch et al.(2013)
pTH2193 		0.916 0.600
Nr2f6
M03419_2.00 		Mus musculus
RAGGTCAADAGGTCA
TGACCTHTTGACCTY		 SELEX
Jolma et al.(2013)
Nr2f6_1 		0.916 0.600
Nr2f6
M03420_2.00 		Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
Nr2f6_2 		0.916 0.600
usp
M03934_2.00 		Drosophila melanogaster
ARRGGTCAAAGGTCA
TGACCTTTGACCYYT		 SELEX
Nitta et al.(2015)
usp_1 		0.916 0.543
usp
M06426_2.00 		Drosophila melanogaster
HRRGGTCAH
DTGACCYYD		 B1H
Zhu et al.(2011)
usp_SANGER_5_FBgn0003964 		0.916 0.543
usp
M02709_2.00 		Drosophila melanogaster
GGGGTCACSN
NSGTGACCCC		 SELEX
Mathelier et al.(2014)
MA0016.1 		0.916 0.543
usp
M09689_2.00 		Drosophila melanogaster
KRGGTCACG
CGTGACCYM		 Misc
Kulakovskiy et al.(2009)
usp 		0.916 0.543
usp
M11191_2.00 		Drosophila melanogaster
GRGGTCAYS
SRTGACCYC		 Transfac
Matys et al.(2006)
I$CF1_01 		0.916 0.543
usp
M11192_2.00 		Drosophila melanogaster
GGGGTCAYS
SRTGACCCC		 Transfac
Matys et al.(2006)
I$CF1_02 		0.916 0.543
Hr78
M06430_2.00 		Drosophila melanogaster
HVAGGTCA
TGACCTBD		 B1H
Zhu et al.(2011)
Hr78_SANGER_5_FBgn0015239 		0.911 0.557
Rxra
M00181_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Badis et al.(2009)
Rxra_1035 		0.909 0.571
RXRA
M03408_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRA_1 		0.909 0.571
RXRA
M03409_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRA_2 		0.909 0.571
RXRA
M03410_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRA_3 		0.909 0.571
RXRA
M03411_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRA_4 		0.909 0.571
Rxra
M03421_2.00 		Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
Rxra_1 		0.909 0.571
Rxra
M03422_2.00 		Mus musculus
RGGTCATGACCY
RGGTCATGACCY		 SELEX
Jolma et al.(2013)
Rxra_2 		0.909 0.571
RXRA
M05671_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRA_eDBD_HT-SELEX 		0.909 0.571
RXRA
M05882_2.00 		Homo sapiens
VRGKTBAAAGGTYRH
DYRACCTTTVAMCYB		 SMiLE-seq
Isakova et al.(2017)
RXRa 		0.909 0.571
RXRA
M07993_2.00 		Homo sapiens
NRRGGTCA
TGACCYYN		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_RXRA_HudsonAlpha 		0.909 0.571
RXRA
M07994_2.00 		Homo sapiens
DDNNMRRGGTCANDN
NHNTGACCYYKNNHH		 ChIP-seq
Gerstein et al.(2012)
HepG2_RXRA_HudsonAlpha 		0.909 0.571
RXRA
M09294_2.00 		Homo sapiens
VDDDNDNNVRRRGGKCAVDV
BHBTGMCCYYYBNNHNHHHB		 Misc
Kulakovskiy et al.(2013)
RXRA_HUMAN.H11MO.0.A 		0.909 0.571
Rxra
M09306_2.00 		Mus musculus
DDVNNNNNRAGKTCAAGGYCA
TGRCCTTGAMCTYNNNNNBHH		 Misc
Kulakovskiy et al.(2013)
RXRA_MOUSE.H11MO.0.A 		0.909 0.571
RXRA
M11182_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RXRA_07 		0.909 0.571
RXRA
M05672_2.00 		Homo sapiens
RRGGTCAAAGGTCAH
DTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRA_eDBD_Methyl-HT-SELEX 		0.909 0.571
Rxrb
M02402_2.00 		Mus musculus
VRGGTCAH
DTGACCYB		 PBM
Weirauch et al.(2014)
pTH2861 		0.907 0.557
RXRB
M03415_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRB_1 		0.907 0.557
Rxrb
M03435_2.00 		Mus musculus
GRGGTCAAAGGTCA
TGACCTTTGACCYC		 SELEX
Jolma et al.(2013)
Rxrb_1 		0.907 0.557
RXRB
M05681_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_1 		0.907 0.557
RXRB
M05682_2.00 		Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_2 		0.907 0.557
RXRB
M09297_2.00 		Homo sapiens
DSAGGTCASD
HSTGACCTSH		 Misc
Kulakovskiy et al.(2013)
RXRB_HUMAN.H11MO.0.C 		0.907 0.557
Rxrb
M09330_2.00 		Mus musculus
DSAGGTCASD
HSTGACCTSH		 Misc
Kulakovskiy et al.(2013)
RXRB_MOUSE.H11MO.0.C 		0.907 0.557
RXRB
M05683_2.00 		Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_1 		0.907 0.557
RXRB
M05684_2.00 		Homo sapiens
RRGGTCRYGACCYY
RRGGTCRYGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_2 		0.907 0.557
NR6A1
M05627_2.00 		Homo sapiens
NNSAAGKTCAAGKKYRN
NYRMMCTTGAMCTTSNN		 SELEX
Yin et al.(2017)
NR6A1_eDBD_HT-SELEX 		0.905 0.557
NR6A1
M09284_2.00 		Homo sapiens
AAGKTCAAGKTCA
TGAMCTTGAMCTT		 Misc
Kulakovskiy et al.(2013)
NR6A1_HUMAN.H11MO.0.B 		0.905 0.557
NR6A1
M11148_2.00 		Homo sapiens
NKCAAGKTCAAGKTCANN
NNTGAMCTTGAMCTTGMN		 Transfac
Matys et al.(2006)
V$GCNF_01 		0.905 0.557
NR6A1
M11149_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCNF_Q3 		0.905 0.557
NR6A1
M05628_2.00 		Homo sapiens
NYSAAGKTCAAGKKCRN
NYGMMCTTGAMCTTSRN		 SELEX
Yin et al.(2017)
NR6A1_eDBD_Methyl-HT-SELEX 		0.905 0.557
Q95WG3_ACRMI
M02424_2.00 		Acropora millepora
NRAGGTCAN
NTGACCTYN		 PBM
Weirauch et al.(2014)
pTH6144 		0.895 0.600
Hr4
M06435_2.00 		Drosophila melanogaster
AAGGTCA
TGACCTT		 B1H
Zhu et al.(2011)
Hr4_SANGER_5_FBgn0023546 		0.872 0.543
NR1D1
M05605_2.00 		Homo sapiens
NWWNTRGGTYASTRGGTCAN
NTGACCYASTRACCYANWWN		 SELEX
Yin et al.(2017)
NR1D1_eDBD_HT-SELEX 		0.865 0.600
NR1D1
M09276_2.00 		Homo sapiens
DRVNMASTGGGNCANDNDN
NHNHNTGNCCCASTKNBYH		 Misc
Kulakovskiy et al.(2013)
NR1D1_HUMAN.H11MO.0.B 		0.865 0.600
Nr1d1
M09310_2.00 		Mus musculus
DRVNMASTGGGNCANDNDN
NHNHNTGNCCCASTKNBYH		 Misc
Kulakovskiy et al.(2013)
NR1D1_MOUSE.H11MO.0.A 		0.865 0.600
NR1D1
M11136_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$REVERBALPHA_Q6 		0.865 0.600
NR1D1
M05606_2.00 		Homo sapiens
NAWNKRGGTYAGTRGGTCRN
NYGACCYACTRACCYMNWTN		 SELEX
Yin et al.(2017)
NR1D1_eDBD_Methyl-HT-SELEX 		0.865 0.600
NR1D2
M05659_2.00 		Homo sapiens
DWWNKRKGTYANTRKGTYRN
NYRACMYANTRACMYMNWWH		 SELEX
Yin et al.(2017)
NR1D2_eDBD_HT-SELEX 		0.863 0.600
Nr1d2
M09313_2.00 		Mus musculus
NVRDVWVTRRGTCANDVDN
NHBHNTGACYYABWBHYBN		 Misc
Kulakovskiy et al.(2013)
NR1D2_MOUSE.H11MO.0.A 		0.863 0.600
NR1D2
M05660_2.00 		Homo sapiens
NWWNBRGGKYAVTRGGKCRN
NYGMCCYABTRMCCYVNWWN		 SELEX
Yin et al.(2017)
NR1D2_eDBD_Methyl-HT-SELEX 		0.863 0.600
Q6VU64_APLCA
M02423_2.00 		Aplysia californica
NRGGTCAN
NTGACCYN		 PBM
Weirauch et al.(2014)
pTH6055 		0.823 0.557
nr1h5.S
M11194_2.00 		Xenopus laevis Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXRIR1_Q6 		0.808 0.543
Nr1h2
M09620_2.00 		Mus musculus
RGGTYACTNNAGGTCA
TGACCTNNAGTRACCY		 Misc
Heinz et al.(2010)
RAW-LXRb.biotin_GSE21512 		0.789 0.500
NR1H3
M09264_2.00 		Homo sapiens
NHRRGGBHABHNNRGGNCA
TGNCCYNNDVTDVCCYYDN		 Misc
Kulakovskiy et al.(2013)
NR1H3_HUMAN.H11MO.0.B 		0.789 0.514
Nr1h3
M09301_2.00 		Mus musculus
VDGDNCARAGKBCAN
NTGVMCTYTGNHCHB		 Misc
Kulakovskiy et al.(2013)
NR1H3_MOUSE.H11MO.0.A 		0.789 0.514
ftz-f1
M02407_2.00 		Drosophila melanogaster
RRGGTCAH
DTGACCYY		 PBM
Weirauch et al.(2014)
pTH5709 		0.780 0.557
ftz-f1
M06417_2.00 		Drosophila melanogaster
MMRKYYSAAGGWCRCYGM
KCRGYGWCCTTSRRMYKK		 B1H
Zhu et al.(2011)
ftz-f1_FlyReg_FBgn0001078 		0.780 0.557
ftz-f1
M06418_2.00 		Drosophila melanogaster
AAGGTCA
TGACCTT		 B1H
Zhu et al.(2011)
ftz-f1_SANGER_5_FBgn0001078 		0.780 0.557
NR4A1
M05601_2.00 		Homo sapiens
NAAAGGTCAN
NTGACCTTTN		 SELEX
Yin et al.(2017)
NR4A1_eDBD_HT-SELEX_1 		0.777 0.571
NR4A1
M05602_2.00 		Homo sapiens
NAAAGGTCAN
NTGACCTTTN		 SELEX
Yin et al.(2017)
NR4A1_eDBD_HT-SELEX_2 		0.777 0.571
NR4A1
M08153_2.00 		Homo sapiens
NAAAGGTCAN
NTGACCTTTN		 ChIP-seq
Mathelier et al.(2014)
MA1112.1 		0.777 0.571
NR4A1
M09274_2.00 		Homo sapiens
AAAKGBCAN
NTGVCMTTT		 Misc
Kulakovskiy et al.(2013)
NR4A1_HUMAN.H11MO.0.A 		0.777 0.571
NR4A1
M09608_2.00 		Homo sapiens
NNDNAAAGGTCA
TGACCTTTNHNN		 Misc
Heinz et al.(2010)
K562-NR4A1_GSE31363 		0.777 0.571
NR4A1
M11132_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NUR77_Q5_01 		0.777 0.571
NR4A1
M11133_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NUR77_Q5_02 		0.777 0.571
NR4A1
M11134_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NUR77_Q5 		0.777 0.571
NR4A1
M05603_2.00 		Homo sapiens
NAAAGGTCRN
NYGACCTTTN		 SELEX
Yin et al.(2017)
NR4A1_eDBD_Methyl-HT-SELEX_1 		0.777 0.571
NR4A1
M05604_2.00 		Homo sapiens
NAAAGGTCRN
NYGACCTTTN		 SELEX
Yin et al.(2017)
NR4A1_eDBD_Methyl-HT-SELEX_2 		0.777 0.571
Nr4a1
M09317_2.00 		Mus musculus
NRAADGKCA
TGMCHTTYN		 Misc
Kulakovskiy et al.(2013)
NR4A1_MOUSE.H11MO.0.B 		0.777 0.557
NR5A2
M05589_2.00 		Homo sapiens
YCAAGGYCRYGRCCTTSR
YSAAGGYCRYGRCCTTGR		 SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_1 		0.771 0.571
NR5A2
M05590_2.00 		Homo sapiens
NYCAAGGTCAH
DTGACCTTGRN		 SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_2 		0.771 0.571
NR5A2
M05591_2.00 		Homo sapiens
YGRCCTTSVNYSAAGGYCR
YGRCCTTSRNBSAAGGYCR		 SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_3 		0.771 0.571
NR5A2
M09271_2.00 		Homo sapiens
NBYCAAGGYCA
TGRCCTTGRVN		 Misc
Kulakovskiy et al.(2013)
NR5A2_HUMAN.H11MO.0.B 		0.771 0.571
NR5A2
M11126_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LRH1_Q5_01 		0.771 0.571
NR5A2
M11127_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LRH1_Q5 		0.771 0.571
NR5A2
M11128_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LRH1_Q6 		0.771 0.571
NR5A2
M05592_2.00 		Homo sapiens
YCAAGGYCRYGACCTTSR
YSAAGGTCRYGRCCTTGR		 SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_1 		0.771 0.571
NR5A2
M05593_2.00 		Homo sapiens
NYCAAGGTCRH
DYGACCTTGRN		 SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_2 		0.771 0.571
NR5A2
M05594_2.00 		Homo sapiens
YGRCCTTSVNBSAAGGYCR
YGRCCTTSVNBSAAGGYCR		 SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_3 		0.771 0.571
NR1H4
M00368_2.00 		Homo sapiens
NVRGGTCANN
NNTGACCYBN		 PBM
Barrera et al.(2016)
NR1H4_REF 		0.758 0.557
NR1H4
M05876_2.00 		Homo sapiens
DRGKTCAHHKD
HMDDTGAMCYH		 SMiLE-seq
Isakova et al.(2017)
NR1H4 		0.758 0.557
NR1H4
M08152_2.00 		Homo sapiens
NNGGTCATTNN
NNAATGACCNN		 ChIP-seq
Mathelier et al.(2014)
MA1110.1 		0.758 0.557
NR1H4
M09263_2.00 		Homo sapiens
CCBVNVGGYCRBTGMCCYB
VRGGKCAVYGRCCBNBVGG		 Misc
Kulakovskiy et al.(2013)
NR1H4_HUMAN.H11MO.0.B 		0.758 0.557
Nr1h4
M09332_2.00 		Mus musculus
CCBVNVGGYCRBTGMCCYB
VRGGKCAVYGRCCBNBVGG		 Misc
Kulakovskiy et al.(2013)
NR1H4_MOUSE.H11MO.0.A 		0.758 0.557
Nr1h4
M09618_2.00 		Mus musculus
NRGGBCANTGVCCY
RGGBCANTGVCCYN		 Misc
Heinz et al.(2010)
Liver-FXR_Chong_et_al. 		0.758 0.557
NR1H4
M11086_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXR_Q2 		0.758 0.557
NR1H4
M11087_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXR_Q3 		0.758 0.557
NR1H4
M11088_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXR_Q5 		0.758 0.557
NR1H4
M11089_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXRRXR_Q5 		0.758 0.557
NR1H4
M00367_2.00 		Homo sapiens
NNNTWTTATDHNN
NNDHATAAWANNN		 PBM
Barrera et al.(2016)
NR1H4_C144R 		0.758 0.543
Esr1
M00813_2.00 		Mus musculus
NRKGTCANNN
NNNTGACMYN		 PBM
Weirauch et al.(2013)
pTH3510 		0.757 0.571
ESR1
M03356_2.00 		Homo sapiens
NRGGTCAMVRTGACCTK
MAGGTCAYBKTGACCYN		 SELEX
Jolma et al.(2013)
ESR1_1 		0.757 0.571
ESR1
M05569_2.00 		Homo sapiens
NAGGTCAYSRTGACCTN
NAGGTCAYSRTGACCTN		 SELEX
Yin et al.(2017)
ESR1_eDBD_HT-SELEX 		0.757 0.571
ESR1
M05571_2.00 		Homo sapiens
NRGGTCANSNTGACCYN
NRGGTCANSNTGACCYN		 SELEX
Yin et al.(2017)
ESR1_FL_HT-SELEX 		0.757 0.571
ESR1
M07985_2.00 		Homo sapiens
DNBYMAAGGTCANN
NNTGACCTTKRVNH		 ChIP-seq
Gerstein et al.(2012)
HepG2_ERRA_Stanford 		0.757 0.571
ESR1
M08217_2.00 		Homo sapiens
NHNRGGTCANNNTGNCCY
RGGNCANNNTGACCYNDN		 ChIP-seq
Contrino et al.(2012)
Mv66 		0.757 0.571
ESR1
M08218_2.00 		Homo sapiens
CCAAGGTCAS
STGACCTTGG		 ChIP-seq
Contrino et al.(2012)
Mv67 		0.757 0.571
ESR1
M09267_2.00 		Homo sapiens
RGGKCABMNTGMCCY
RGGKCANKVTGMCCY		 Misc
Kulakovskiy et al.(2013)
ESR1_HUMAN.H11MO.0.A 		0.757 0.571
Esr1
M09309_2.00 		Mus musculus
RGGDCABKSTGWCCY
RGGWCASMVTGHCCY		 Misc
Kulakovskiy et al.(2013)
ESR1_MOUSE.H11MO.0.A 		0.757 0.571
ESR1
M09604_2.00 		Homo sapiens
NRGGTCANNNTGACC
GGTCANNNTGACCYN		 Misc
Heinz et al.(2010)
MCF7-ERa_Unpublished 		0.757 0.571
ESR1
M11098_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ERALPHA_01 		0.757 0.571
ESR1
M11099_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ERALPHA_Q4 		0.757 0.571
ESR1
M11100_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ERALPHA_Q6_01 		0.757 0.571
ESR1
M11101_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ERALPHA_Q6_02 		0.757 0.571
ESR1
M11102_2.00 		Homo sapiens
NHRGGTCAVNNHNNHYBNN
NNVRDNNDNNBTGACCYDN		 Transfac
Matys et al.(2006)
V$ER_Q6 		0.757 0.571
ESR1
M11103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ESR1_04 		0.757 0.571
ESR1
M11104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ESR1_05 		0.757 0.571
ESR1
M05570_2.00 		Homo sapiens
NAGGTCAYSRYGACCTH
DAGGTCRYSRTGACCTN		 SELEX
Yin et al.(2017)
ESR1_eDBD_Methyl-HT-SELEX 		0.757 0.571
ESR1
M05572_2.00 		Homo sapiens
NRGGTCANSBYGACCYN
NRGGTCRVSNTGACCYN		 SELEX
Yin et al.(2017)
ESR1_FL_Methyl-HT-SELEX 		0.757 0.571
Esr2
M01297_2.00 		Mus musculus
NNRGGTCAH
DTGACCYNN		 PBM
Lambert et al.(2019)
pTH3511 		0.751 0.571
ESR2
M08154_2.00 		Homo sapiens
RGGTCASNNWGNCCY
RGGNCWNNSTGACCY		 ChIP-seq
Mathelier et al.(2014)
MA0258.2 		0.751 0.571
ESR2
M09279_2.00 		Homo sapiens
RGGKCRVRSYGMCCY
RGGKCRSYBYGMCCY		 Misc
Kulakovskiy et al.(2013)
ESR2_HUMAN.H11MO.0.A 		0.751 0.571
Esr2
M09311_2.00 		Mus musculus
RGGKCRVRSYGMCCY
RGGKCRSYBYGMCCY		 Misc
Kulakovskiy et al.(2013)
ESR2_MOUSE.H11MO.0.A 		0.751 0.571
ESR2
M11146_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ERBETA_Q5_01 		0.751 0.571
ESR2
M11147_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ERBETA_Q5 		0.751 0.571
Nr5a2
M00816_2.00 		Mus musculus
VAAGGTCR
YGACCTTB		 PBM
Weirauch et al.(2013)
pTH3468 		0.745 0.543
Nr5a2
M08158_2.00 		Mus musculus
VRDBTCAAGGYCANN
NNTGRCCTTGAVHYB		 ChIP-seq
Mathelier et al.(2014)
MA0505.1 		0.745 0.543
Nr5a2
M09320_2.00 		Mus musculus
NBYCAAGGYCA
TGRCCTTGRVN		 Misc
Kulakovskiy et al.(2013)
NR5A2_MOUSE.H11MO.0.A 		0.745 0.543
Nr5a2
M09616_2.00 		Mus musculus
BYCAAGGYCA
TGRCCTTGRV		 Misc
Heinz et al.(2010)
Pancreas-LRH1_GSE34295 		0.745 0.543
Nr5a2
M09615_2.00 		Mus musculus
BYCAAGGYCA
TGRCCTTGRV		 Misc
Heinz et al.(2010)
mES-Nr5a2_GSE19019 		0.745 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000332296 Nuclear receptor 79 148
ENSP00000373282 Nuclear receptor 86 155
ENSP00000391391 Nuclear receptor 1 36
ENSP00000398840 Nuclear receptor 1 36

Links

Other Nuclear receptor family TFs
Other Homo sapiens TFs

2849 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30204.m001803 Ricinus communis 30204.m001803 N 0.000
ABI3 Arabidopsis thaliana AT3G24650 N 0.000
ABI3 Vitis vinifera VIT_07s0005g05400 N 0.000
ABI3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3002399 N 0.000
AMTR_s00049p00034730 Amborella trichopoda AMTR_s00049p00034730 N 0.000
Aquca_108_00003 Aquilegia coerulea Aquca_108_00003 N 0.000
BGIOSGA000276 Oryza indica BGIOSGA000276 N 0.000
Bo3g083650 Brassica oleracea Bo3g083650 N 0.000
Bostr.19424s0154 Boechera stricta Bostr.19424s0154 N 0.000
Bra013248 Brassica rapa Bra013248 N 0.000
BRADI2G58390 Brachypodium distachyon BRADI2G58390 N 0.000
Cagra.2774s0002 Capsella grandiflora Cagra.2774s0002 N 0.000
Carubv10016094m.g Capsella rubella Carubv10016094m.g N 0.000
cassava2971.m1 Manihot esculenta cassava2971.m1 N 0.000
cassava34238.m1 Manihot esculenta cassava34238.m1 N 0.000
Ca_21518 Cicer arietinum Ca_21518 N 0.000
chr1.CM0147.220.nd Lotus japonicus chr1.CM0147.220.nd N 0.000
Ciclev10019039m.g Citrus clementina Ciclev10019039m.g N 0.000
Cla015213 Citrullus lanatus Cla015213 N 0.000
Cucsa.078480 Cucumis sativus Cucsa.078480 N 0.000
evm.TU.supercontig_8.187 Carica papaya evm.TU.supercontig_8.187 N 0.000
F775_43744 Aegilops tauschii F775_43744 N 0.000
gene17562-v1.0-hybrid Fragaria vesca gene17562-v1.0-hybrid N 0.000
GLYMA08G47240 Glycine max GLYMA08G47240 N 0.000
GLYMA18G38490 Glycine max GLYMA18G38490 N 0.000
Gorai.001G184300 Gossypium raimondii Gorai.001G184300 N 0.000
GRMZM2G133398 Zea mays GRMZM2G133398 N 0.000
GSMUA_Achr7G23040_001 Musa acuminata GSMUA_Achr7G23040_001 N 0.000
GSMUA_AchrUn_randomG18520_001 Musa acuminata GSMUA_AchrUn_randomG18520_001 N 0.000
LPERR01G35880 Leersia perrieri LPERR01G35880 N 0.000
Lus10011888.g Linum usitatissimum Lus10011888.g N 0.000
Lus10022820.g Linum usitatissimum Lus10022820.g N 0.000
MDP0000309680 Malus domestica MDP0000309680 N 0.000
mgf023017m Mimulus guttatus mgf023017m N 0.000
MLOC_69727 Hordeum vulgare MLOC_69727 N 0.000
MTR_7g059330 Medicago truncatula MTR_7g059330 N 0.000
OB01G50120 Oryza brachyantha OB01G50120 N 0.000
OBART01G41410 Oryza barthii OBART01G41410 N 0.000
OGLUM01G45580 Oryza glumaepatula OGLUM01G45580 N 0.000
OLONG_001180 Oryza longistaminata OLONG_001180 N 0.000
OMERI01G38380 Oryza meridionalis OMERI01G38380 N 0.000
ONIVA01G46510 Oryza nivara ONIVA01G46510 N 0.000
orange1.1g038867m.g Citrus sinensis orange1.1g038867m.g N 0.000
ORGLA01G0353400 Oryza glaberrima ORGLA01G0353400 N 0.000
Pavir.Ea03476 Panicum virgatum Pavir.Ea03476 N 0.000
Pavir.J03563 Panicum virgatum Pavir.J03563 N 0.000
PDK_20s1318001g001 Phoenix dactylifera PDK_20s1318001g001 N 0.000
PGSC0003DMG400020088 Solanum tuberosum PGSC0003DMG400020088 N 0.000
PGSC0003DMG400020155 Solanum tuberosum PGSC0003DMG400020155 N 0.000
Pm020417 Prunus mume Pm020417 N 0.000
POPTR_0002s25330 Populus trichocarpa POPTR_0002s25330 N 0.000
PRUPE_ppa001608mg Prunus persica PRUPE_ppa001608mg N 0.000
SapurV1A.0937s0080 Salix purpurea SapurV1A.0937s0080 N 0.000
Sb03g043480 Sorghum bicolor Sb03g043480 N 0.000
Si000497m.g Setaria italica Si000497m.g N 0.000
Solyc06g083590.2 Solanum lycopersicum Solyc06g083590.2 N 0.000
Solyc06g083600.1 Solanum lycopersicum Solyc06g083600.1 N 0.000
TCM_003056 Theobroma cacao TCM_003056 N 0.000
Thhalv10003110m.g Eutrema salsugineum Thhalv10003110m.g N 0.000
TRAES3BF066400010CFD_g Triticum aestivum TRAES3BF066400010CFD_g N 0.000
VP1 Oryza sativa OS01G0911700 N 0.000