NR4A1 (Tetraodon nigroviridis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 ENSTNIG00000012516 T305006_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NR4A1
M05601_2.00 		Homo sapiens
NAAAGGTCAN
NTGACCTTTN		 SELEX
Yin et al.(2017)
NR4A1_eDBD_HT-SELEX_1 		0.988 0.929
NR4A1
M05602_2.00 		Homo sapiens
NAAAGGTCAN
NTGACCTTTN		 SELEX
Yin et al.(2017)
NR4A1_eDBD_HT-SELEX_2 		0.988 0.929
NR4A1
M08153_2.00 		Homo sapiens
NAAAGGTCAN
NTGACCTTTN		 ChIP-seq
Mathelier et al.(2014)
MA1112.1 		0.988 0.929
NR4A1
M09274_2.00 		Homo sapiens
AAAKGBCAN
NTGVCMTTT		 Misc
Kulakovskiy et al.(2013)
NR4A1_HUMAN.H11MO.0.A 		0.988 0.929
NR4A1
M09608_2.00 		Homo sapiens
NNDNAAAGGTCA
TGACCTTTNHNN		 Misc
Heinz et al.(2010)
K562-NR4A1_GSE31363 		0.988 0.929
NR4A1
M11132_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NUR77_Q5_01 		0.988 0.929
NR4A1
M11133_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NUR77_Q5_02 		0.988 0.929
NR4A1
M11134_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NUR77_Q5 		0.988 0.929
NR4A1
M05603_2.00 		Homo sapiens
NAAAGGTCRN
NYGACCTTTN		 SELEX
Yin et al.(2017)
NR4A1_eDBD_Methyl-HT-SELEX_1 		0.988 0.929
NR4A1
M05604_2.00 		Homo sapiens
NAAAGGTCRN
NYGACCTTTN		 SELEX
Yin et al.(2017)
NR4A1_eDBD_Methyl-HT-SELEX_2 		0.988 0.929
Nr4a1
M09317_2.00 		Mus musculus
NRAADGKCA
TGMCHTTYN		 Misc
Kulakovskiy et al.(2013)
NR4A1_MOUSE.H11MO.0.B 		0.988 0.914
Nr4a2
M00818_2.00 		Mus musculus
AAAGGTCA
TGACCTTT		 PBM
Weirauch et al.(2013)
pTH3467 		0.976 0.900
NR4A2
M03383_2.00 		Homo sapiens
AGGTCAHNNNDTGACCT
AGGTCAHNNNDTGACCT		 SELEX
Jolma et al.(2013)
NR4A2_1 		0.976 0.900
NR4A2
M03384_2.00 		Homo sapiens
TGACCTTTAAAGGTCA
TGACCTTTAAAGGTCA		 SELEX
Jolma et al.(2013)
NR4A2_2 		0.976 0.900
NR4A2
M03385_2.00 		Homo sapiens
NBTAAAGGTCA
TGACCTTTAVN		 SELEX
Jolma et al.(2013)
NR4A2_3 		0.976 0.900
NR4A2
M05639_2.00 		Homo sapiens
NWAAKGTCAN
NTGACMTTWN		 SELEX
Yin et al.(2017)
NR4A2_eDBD_HT-SELEX 		0.976 0.900
NR4A2
M05881_2.00 		Homo sapiens
NAAAKGTYA
TRACMTTTN		 SMiLE-seq
Isakova et al.(2017)
NR4A2 		0.976 0.900
NR4A2
M09286_2.00 		Homo sapiens
RAAGGTCAV
BTGACCTTY		 Misc
Kulakovskiy et al.(2013)
NR4A2_HUMAN.H11MO.0.C 		0.976 0.900
Nr4a2
M09323_2.00 		Mus musculus
RAAGGTCAV
BTGACCTTY		 Misc
Kulakovskiy et al.(2013)
NR4A2_MOUSE.H11MO.0.C 		0.976 0.900
NR4A2
M11151_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NURR1_Q3_01 		0.976 0.900
NR4A2
M11152_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NURR1_Q3 		0.976 0.900
NR4A2
M08461_2.00 		Homo sapiens
RAGGTCAM
KTGACCTY		 COMPILED
Mathelier et al.(2014)
MA0160.1 		0.976 0.900
NR4A2
M05640_2.00 		Homo sapiens
NAAAGGTCRN
NYGACCTTTN		 SELEX
Yin et al.(2017)
NR4A2_eDBD_Methyl-HT-SELEX 		0.976 0.900
Hr38
M03939_2.00 		Drosophila melanogaster
NAAAGGTCA
TGACCTTTN		 SELEX
Nitta et al.(2015)
Hr38_1 		0.967 0.857
nhr-6
M01298_2.00 		Caenorhabditis elegans
AAAKGTCA
TGACMTTT		 PBM
Lambert et al.(2019)
pTH9944 		0.894 0.729
Rxrb
M02402_2.00 		Mus musculus
VRGGTCAH
DTGACCYB		 PBM
Weirauch et al.(2014)
pTH2861 		0.843 0.657
RXRB
M03415_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRB_1 		0.843 0.657
Rxrb
M03435_2.00 		Mus musculus
GRGGTCAAAGGTCA
TGACCTTTGACCYC		 SELEX
Jolma et al.(2013)
Rxrb_1 		0.843 0.657
RXRB
M05681_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_1 		0.843 0.657
RXRB
M05682_2.00 		Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_2 		0.843 0.657
RXRB
M09297_2.00 		Homo sapiens
DSAGGTCASD
HSTGACCTSH		 Misc
Kulakovskiy et al.(2013)
RXRB_HUMAN.H11MO.0.C 		0.843 0.657
Rxrb
M09330_2.00 		Mus musculus
DSAGGTCASD
HSTGACCTSH		 Misc
Kulakovskiy et al.(2013)
RXRB_MOUSE.H11MO.0.C 		0.843 0.657
RXRB
M05683_2.00 		Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_1 		0.843 0.657
RXRB
M05684_2.00 		Homo sapiens
RRGGTCRYGACCYY
RRGGTCRYGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_2 		0.843 0.657
Rxra
M00181_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Badis et al.(2009)
Rxra_1035 		0.840 0.657
RXRA
M03408_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRA_1 		0.840 0.657
RXRA
M03409_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRA_2 		0.840 0.657
RXRA
M03410_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRA_3 		0.840 0.657
RXRA
M03411_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRA_4 		0.840 0.657
Rxra
M03421_2.00 		Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
Rxra_1 		0.840 0.657
Rxra
M03422_2.00 		Mus musculus
RGGTCATGACCY
RGGTCATGACCY		 SELEX
Jolma et al.(2013)
Rxra_2 		0.840 0.657
RXRA
M05671_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRA_eDBD_HT-SELEX 		0.840 0.657
RXRA
M05882_2.00 		Homo sapiens
VRGKTBAAAGGTYRH
DYRACCTTTVAMCYB		 SMiLE-seq
Isakova et al.(2017)
RXRa 		0.840 0.657
RXRA
M07993_2.00 		Homo sapiens
NRRGGTCA
TGACCYYN		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_RXRA_HudsonAlpha 		0.840 0.657
RXRA
M07994_2.00 		Homo sapiens
DDNNMRRGGTCANDN
NHNTGACCYYKNNHH		 ChIP-seq
Gerstein et al.(2012)
HepG2_RXRA_HudsonAlpha 		0.840 0.657
RXRA
M09294_2.00 		Homo sapiens
VDDDNDNNVRRRGGKCAVDV
BHBTGMCCYYYBNNHNHHHB		 Misc
Kulakovskiy et al.(2013)
RXRA_HUMAN.H11MO.0.A 		0.840 0.657
Rxra
M09306_2.00 		Mus musculus
DDVNNNNNRAGKTCAAGGYCA
TGRCCTTGAMCTYNNNNNBHH		 Misc
Kulakovskiy et al.(2013)
RXRA_MOUSE.H11MO.0.A 		0.840 0.657
RXRA
M11182_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RXRA_07 		0.840 0.657
RXRA
M05672_2.00 		Homo sapiens
RRGGTCAAAGGTCAH
DTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRA_eDBD_Methyl-HT-SELEX 		0.840 0.657
usp
M03934_2.00 		Drosophila melanogaster
ARRGGTCAAAGGTCA
TGACCTTTGACCYYT		 SELEX
Nitta et al.(2015)
usp_1 		0.839 0.614
usp
M06426_2.00 		Drosophila melanogaster
HRRGGTCAH
DTGACCYYD		 B1H
Zhu et al.(2011)
usp_SANGER_5_FBgn0003964 		0.839 0.614
usp
M02709_2.00 		Drosophila melanogaster
GGGGTCACSN
NSGTGACCCC		 SELEX
Mathelier et al.(2014)
MA0016.1 		0.839 0.614
usp
M09689_2.00 		Drosophila melanogaster
KRGGTCACG
CGTGACCYM		 Misc
Kulakovskiy et al.(2009)
usp 		0.839 0.614
usp
M11191_2.00 		Drosophila melanogaster
GRGGTCAYS
SRTGACCYC		 Transfac
Matys et al.(2006)
I$CF1_01 		0.839 0.614
usp
M11192_2.00 		Drosophila melanogaster
GGGGTCAYS
SRTGACCCC		 Transfac
Matys et al.(2006)
I$CF1_02 		0.839 0.614
Rxrg
M02400_2.00 		Mus musculus
VRGGTCAN
NTGACCYB		 PBM
Weirauch et al.(2014)
pTH2880 		0.835 0.629
RXRG
M03375_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRG_1 		0.835 0.629
RXRG
M03376_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRG_2 		0.835 0.629
RXRG
M03377_2.00 		Homo sapiens
GRGGTCAAAGGTCA
TGACCTTTGACCYC		 SELEX
Jolma et al.(2013)
RXRG_3 		0.835 0.629
RXRG
M03378_2.00 		Homo sapiens
NRGGTCATGACCYC
GRGGTCATGACCYN		 SELEX
Jolma et al.(2013)
RXRG_4 		0.835 0.629
RXRG
M02746_2.00 		Homo sapiens
GGTCAAAGGTCA
TGACCTTTGACC		 SELEX
Jolma et al.(2010)
RXRG_dimer 		0.835 0.629
RXRG
M05615_2.00 		Homo sapiens
VRGGTCAAAGGTCAN
NTGACCTTTGACCYB		 SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_1 		0.835 0.629
RXRG
M05616_2.00 		Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY		 SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_2 		0.835 0.629
RXRG
M05879_2.00 		Homo sapiens
RGGTBAARGGTBRND
HNYVACCYTTVACCY		 SMiLE-seq
Isakova et al.(2017)
RXRg 		0.835 0.629
RXRG
M09280_2.00 		Homo sapiens
NGTCAAAGGTCAH
DTGACCTTTGACN		 Misc
Kulakovskiy et al.(2013)
RXRG_HUMAN.H11MO.0.B 		0.835 0.629
Rxrg
M09305_2.00 		Mus musculus
VDDVDNSVNRAGKTCAAGGYCA
TGRCCTTGAMCTYNBSNHBHHB		 Misc
Kulakovskiy et al.(2013)
RXRG_MOUSE.H11MO.0.B 		0.835 0.629
RXRG
M05617_2.00 		Homo sapiens
DRGGTBAARGGTBRN
NYVACCYTTVACCYH		 SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_1 		0.835 0.629
RXRG
M05618_2.00 		Homo sapiens
VRGGTCAYGACCYB
VRGGTCRTGACCYB		 SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_2 		0.835 0.629
Nr2f6
M00811_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Weirauch et al.(2013)
pTH2193 		0.817 0.543
Nr2f6
M03419_2.00 		Mus musculus
RAGGTCAADAGGTCA
TGACCTHTTGACCTY		 SELEX
Jolma et al.(2013)
Nr2f6_1 		0.817 0.543
Nr2f6
M03420_2.00 		Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
Nr2f6_2 		0.817 0.543
Hr4
M06435_2.00 		Drosophila melanogaster
AAGGTCA
TGACCTT		 B1H
Zhu et al.(2011)
Hr4_SANGER_5_FBgn0023546 		0.815 0.543
Q95WG3_ACRMI
M02424_2.00 		Acropora millepora
NRAGGTCAN
NTGACCTYN		 PBM
Weirauch et al.(2014)
pTH6144 		0.776 0.586
Rora
M00819_2.00 		Mus musculus
NNRGGTCA
TGACCYNN		 PBM
Weirauch et al.(2013)
pTH3464 		0.773 0.586
RORA
M03353_2.00 		Homo sapiens
NMRAGGTCAAVYYVAGGTCA
TGACCTBRRBTTGACCTYKN		 SELEX
Jolma et al.(2013)
RORA_1 		0.773 0.586
RORA
M03354_2.00 		Homo sapiens
WAWSTRGGTYASTAGGTCA
TGACCTASTRACCYASWTW		 SELEX
Jolma et al.(2013)
RORA_2 		0.773 0.586
RORA
M02705_2.00 		Homo sapiens
WWVDAGGTCA
TGACCTHBWW		 SELEX
Mathelier et al.(2014)
MA0071.1 		0.773 0.586
RORA
M02706_2.00 		Homo sapiens
NDWAWBTAGGTCAN
NTGACCTAVWTWHN		 SELEX
Mathelier et al.(2014)
MA0072.1 		0.773 0.586
RORA
M09265_2.00 		Homo sapiens
VWNDRGGBCARDR
YHYTGVCCYHNWB		 Misc
Kulakovskiy et al.(2013)
RORA_HUMAN.H11MO.0.C 		0.773 0.586
Rora
M09327_2.00 		Mus musculus
VWNDRGGBCARDR
YHYTGVCCYHNWB		 Misc
Kulakovskiy et al.(2013)
RORA_MOUSE.H11MO.0.C 		0.773 0.586
RORA
M11090_2.00 		Homo sapiens
DWWWVDAGGTCAH
DTGACCTHBWWWH		 Transfac
Matys et al.(2006)
V$RORA1_01 		0.773 0.586
RORA
M11091_2.00 		Homo sapiens
DWAWBTAGGTCAN
NTGACCTAVWTWH		 Transfac
Matys et al.(2006)
V$RORA2_01 		0.773 0.586
RORA
M11092_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORALPHA_Q4 		0.773 0.586
RORA
M11093_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORA_Q4 		0.773 0.586
Rorb
M00820_2.00 		Mus musculus
NRGGTCANN
NNTGACCYN		 PBM
Weirauch et al.(2013)
pTH3469 		0.768 0.557
rorb
M02404_2.00 		Tetraodon nigroviridis
NGAGGTCANN
NNTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6589 		0.768 0.557
RORB
M05677_2.00 		Homo sapiens
DAWNTRGGTYAGTRGGTCAN
NTGACCYACTRACCYANWTH		 SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_1 		0.768 0.557
RORB
M05678_2.00 		Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN		 SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_2 		0.768 0.557
RORB
M05883_2.00 		Homo sapiens
AWNBRGGTCAN
NTGACCYVNWT		 SMiLE-seq
Isakova et al.(2017)
RORb 		0.768 0.557
RORB
M11187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORBETA_Q2 		0.768 0.557
RORB
M05679_2.00 		Homo sapiens
DAWBTRGGTYAGTRGGTCRN
NYGACCYACTRACCYAVWTH		 SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_1 		0.768 0.557
RORB
M05680_2.00 		Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN		 SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_2 		0.768 0.557
THRA
M03368_2.00 		Homo sapiens
DTGACCTYATVAGGTCAH
DTGACCTBATRAGGTCAH		 SELEX
Jolma et al.(2013)
THRA_1 		0.766 0.586
THRA
M09275_2.00 		Homo sapiens
RGKWSDNNYVAGGWSAN
NTSWCCTBRNNHSWMCY		 Misc
Kulakovskiy et al.(2013)
THA_HUMAN.H11MO.0.C 		0.766 0.586
Thra
M09333_2.00 		Mus musculus
VRGGKCANNYVRGGHCA
TGDCCYBRNNTGMCCYB		 Misc
Kulakovskiy et al.(2013)
THA_MOUSE.H11MO.0.C 		0.766 0.586
Thra
M09619_2.00 		Mus musculus
GGKCANNYVRGGHCA
TGDCCYBRNNTGMCC		 Misc
Heinz et al.(2010)
C17.2-THRa_GSE38347 		0.766 0.586
THRA
M11135_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$T3RALPHA_Q6 		0.766 0.586
AAEL009588
M02388_2.00 		Aedes aegypti
NRGGTCR
YGACCYN		 PBM
Weirauch et al.(2014)
pTH5508 		0.764 0.571
Hr46
M02406_2.00 		Drosophila melanogaster
NRGGTCAN
NTGACCYN		 PBM
Weirauch et al.(2014)
pTH6142 		0.764 0.571
Hr46
M03926_2.00 		Drosophila melanogaster
RGGTCAGTRGGTCA
TGACCYACTGACCY		 SELEX
Nitta et al.(2015)
Hr46_1 		0.764 0.571
Hr46
M06412_2.00 		Drosophila melanogaster
AWKTGGGTYW
WRACCCAMWT		 B1H
Zhu et al.(2011)
Hr46_FlyReg_FBgn0000448 		0.764 0.571
Hr46
M06413_2.00 		Drosophila melanogaster
HWNBAGGTCA
TGACCTVNWD		 B1H
Zhu et al.(2011)
Hr46_SANGER_5_FBgn0000448 		0.764 0.571
Nr2f2
M00184_2.00 		Mus musculus
RRGGTCAN
NTGACCYY		 PBM
Badis et al.(2009)
Nr2f2_2192 		0.761 0.571
NR2F2
M08157_2.00 		Homo sapiens
NNAAGGTCANN
NNTGACCTTNN		 ChIP-seq
Mathelier et al.(2014)
MA1111.1 		0.761 0.571
NR2F2
M08223_2.00 		Homo sapiens
AAAGGTCA
TGACCTTT		 ChIP-seq
Contrino et al.(2012)
Mv102 		0.761 0.571
NR2F2
M08224_2.00 		Homo sapiens
GGKCARAGGB
VCCTYTGMCC		 ChIP-seq
Contrino et al.(2012)
Mv104 		0.761 0.571
NR2F2
M09293_2.00 		Homo sapiens
NARRGGTCADRDN
NHYHTGACCYYTN		 Misc
Kulakovskiy et al.(2013)
COT2_HUMAN.H11MO.0.A 		0.761 0.571
Nr2f2
M09325_2.00 		Mus musculus
NNHRAGGTCANVD
HBNTGACCTYDNN		 Misc
Kulakovskiy et al.(2013)
COT2_MOUSE.H11MO.0.A 		0.761 0.571
NR2F2
M11180_2.00 		Homo sapiens
WRRKKTCAARGGYTCA
TGARCCYTTGAMMYYW		 Transfac
Matys et al.(2006)
V$ARP1_01 		0.761 0.571
NR2F2
M11181_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COUPTF2_Q6 		0.761 0.571
GAG_AVIER
M11193_2.00 		Avian erythroblastosis virus
VHNTRAGGTCACSSNN
NNSSGTGACCTYANDB		 Transfac
Matys et al.(2006)
V$T3R_01 		0.761 0.557
nr2f2
M02393_2.00 		Danio rerio
NNRGGTCAN
NTGACCYNN		 PBM
Weirauch et al.(2014)
pTH5882 		0.758 0.571
Nr2f1
M00822_2.00 		Mus musculus
DRGGTCRN
NYGACCYH		 PBM
Weirauch et al.(2013)
pTH3811 		0.758 0.571
NR2F1
M03403_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F1_1 		0.758 0.571
NR2F1
M03404_2.00 		Homo sapiens
RRGGTCAARAGGTCAN
NTGACCTYTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F1_2 		0.758 0.571
NR2F1
M03405_2.00 		Homo sapiens
RRGGTCAN
NTGACCYY		 SELEX
Jolma et al.(2013)
NR2F1_3 		0.758 0.571
NR2F1
M03406_2.00 		Homo sapiens
NHRRGGTCANVNG
CNBNTGACCYYDN		 SELEX
Jolma et al.(2013)
NR2F1_4 		0.758 0.571
NR2F1
M05661_2.00 		Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_1 		0.758 0.571
NR2F1
M05662_2.00 		Homo sapiens
VRGGTCANYGACCYY
RRGGTCRNTGACCYB		 SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_2 		0.758 0.571
NR2F1
M05665_2.00 		Homo sapiens
VRGGTCAAAGGTCAN
NTGACCTTTGACCYB		 SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_1 		0.758 0.571
NR2F1
M05666_2.00 		Homo sapiens
RRGGTCANYGACCYY
RRGGTCRNTGACCYY		 SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_2 		0.758 0.571
NR2F1
M09291_2.00 		Homo sapiens
NRRRBSRRRGGKCANVN
NBNTGMCCYYYSVYYYN		 Misc
Kulakovskiy et al.(2013)
COT1_HUMAN.H11MO.0.C 		0.758 0.571
Nr2f1
M09334_2.00 		Mus musculus
YARAGGTCA
TGACCTYTR		 Misc
Kulakovskiy et al.(2013)
COT1_MOUSE.H11MO.0.B 		0.758 0.571
NR2F1
M11172_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COUPTF1_Q6_01 		0.758 0.571
NR2F1
M05663_2.00 		Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_1 		0.758 0.571
NR2F1
M05664_2.00 		Homo sapiens
NRGGTCANYGACCYH
DRGGTCRNTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_2 		0.758 0.571
NR2F1
M05667_2.00 		Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_1 		0.758 0.571
NR2F1
M05668_2.00 		Homo sapiens
RRGGTCRNYGACCYY
RRGGTCRNYGACCYY		 SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_2 		0.758 0.571
Nr2c1
M00812_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Weirauch et al.(2013)
pTH1284 		0.755 0.571
Nr2c1
M02399_2.00 		Mus musculus
RRGGTCAH
DTGACCYY		 PBM
Weirauch et al.(2014)
pTH3466 		0.755 0.571
NR2C1
M05597_2.00 		Homo sapiens
NRGKKCRYGAMMYN
NRKKTCRYGMMCYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_1 		0.755 0.571
NR2C1
M05598_2.00 		Homo sapiens
NRRGGTCAN
NTGACCYYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_2 		0.755 0.571
NR2C1
M09273_2.00 		Homo sapiens
RBYVRVAGGTCAB
VTGACCTBYBRVY		 Misc
Kulakovskiy et al.(2013)
NR2C1_HUMAN.H11MO.0.C 		0.755 0.571
Nr2c1
M09304_2.00 		Mus musculus
RBYVRVAGGTCAB
VTGACCTBYBRVY		 Misc
Kulakovskiy et al.(2013)
NR2C1_MOUSE.H11MO.0.C 		0.755 0.571
NR2C1
M05599_2.00 		Homo sapiens
NRRGGTCAN
NTGACCYYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_1 		0.755 0.571
NR2C1
M05600_2.00 		Homo sapiens
RRGGTCRYGACCYY
RRGGTCRYGACCYY		 SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_2 		0.755 0.571
Q969A9_BOMMO
M02410_2.00 		Bombyx mori
VRGGTCDN
NHGACCYB		 PBM
Weirauch et al.(2014)
pTH5516 		0.754 0.557
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000015485 Nuclear receptor 234 303

Links

Other Nuclear receptor family TFs
Other Tetraodon nigroviridis TFs

1357 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAB21580 Xenopus laevis AAB21580 I
AAB22139 Xenopus laevis AAB22139 I
AAL11024 Xenopus tropicalis AAL11024 I
Aan_R003723 Calypte anna Aan_R003723 I
Aan_R006110 Calypte anna Aan_R006110 I
AAO11649 Xenopus laevis AAO11649 I
Afo_R014067 Aptenodytes forsteri Afo_R014067 I
Alligator_sinensis_CCG017418.1 Alligator sinensis Alligator_sinensis_CCG017418.1 I
Alligator_sinensis_CCG017419.1 Alligator sinensis Alligator_sinensis_CCG017419.1 I
Alligator_sinensis_CCG018754.1 Alligator sinensis Alligator_sinensis_CCG018754.1 I
Brh_R000054 Buceros rhinoceros Brh_R000054 I
CLEC002330 Cimex lectularius CLEC002330 I
D917_06339 Trichinella nativa D917_06339 I
D918_04086 Trichuris suis D918_04086 I
EFV52759 Trichinella spiralis EFV52759 I
ENSAMEG00000012326 Ailuropoda melanoleuca ENSAMEG00000012326 I
ENSAMEG00000013193 Ailuropoda melanoleuca ENSAMEG00000013193 I
ENSAMEG00000013207 Ailuropoda melanoleuca ENSAMEG00000013207 I
ENSAMXG00000000425 Astyanax mexicanus ENSAMXG00000000425 I
ENSAMXG00000000428 Astyanax mexicanus ENSAMXG00000000428 I
ENSAMXG00000007437 Astyanax mexicanus ENSAMXG00000007437 I
ENSAMXG00000017040 Astyanax mexicanus ENSAMXG00000017040 I
ENSAPLG00000001124 Anas platyrhynchos ENSAPLG00000001124 I
ENSAPLG00000002254 Anas platyrhynchos ENSAPLG00000002254 I
ENSBTAP00000007923-D1 Bos grunniens ENSBTAP00000007923-D1 I
ENSCPOG00000007763 Cavia porcellus ENSCPOG00000007763 I
ENSCSAG00000003889 Chlorocebus sabaeus ENSCSAG00000003889 I
ENSCSAG00000003893 Chlorocebus sabaeus ENSCSAG00000003893 I
ENSCSAG00000014291 Chlorocebus sabaeus ENSCSAG00000014291 I
ENSFALG00000002471 Ficedula albicollis ENSFALG00000002471 I
ENSFALG00000010503 Ficedula albicollis ENSFALG00000010503 I
ENSFALG00000010507 Ficedula albicollis ENSFALG00000010507 I
ENSLACG00000010731 Latimeria chalumnae ENSLACG00000010731 I
ENSLACG00000014874 Latimeria chalumnae ENSLACG00000014874 I
ENSLOCG00000010722 Lepisosteus oculatus ENSLOCG00000010722 I
ENSMEUG00000010618 Macropus eugenii ENSMEUG00000010618 I
ENSMEUG00000010628 Macropus eugenii ENSMEUG00000010628 I
ENSMEUG00000015462 Macropus eugenii ENSMEUG00000015462 I
ENSMGAG00000011091 Meleagris gallopavo ENSMGAG00000011091 I
ENSMICG00000011211 Microcebus murinus ENSMICG00000011211 I
ENSMMUG00000000064 Macaca mulatta ENSMMUG00000000064 I
ENSMPUG00000004935 Mustela putorius furo ENSMPUG00000004935 I
ENSMPUG00000004945 Mustela putorius furo ENSMPUG00000004945 I
ENSMPUG00000011508 Mustela putorius furo ENSMPUG00000011508 I
ENSNLEG00000005194 Nomascus leucogenys ENSNLEG00000005194 I
ENSNLEG00000005207 Nomascus leucogenys ENSNLEG00000005207 I
ENSNLEG00000018108 Nomascus leucogenys ENSNLEG00000018108 I
ENSOARG00000015145 Ovis aries ENSOARG00000015145 I
ENSOARG00000015159 Ovis aries ENSOARG00000015159 I
ENSONIG00000000007 Oreochromis niloticus ENSONIG00000000007 I
ENSONIG00000000077 Oreochromis niloticus ENSONIG00000000077 I
ENSONIG00000010796 Oreochromis niloticus ENSONIG00000010796 I
ENSONIG00000019313 Oreochromis niloticus ENSONIG00000019313 I
ENSP00000228641 Macaca fascicularis ENSP00000228641 I
ENSP00000228641-D1 Bos grunniens ENSP00000228641-D1 I
ENSP00000228644 Macaca fascicularis ENSP00000228644 I
ENSP00000241651 Macaca fascicularis ENSP00000241651 I
ENSPANG00000007910 Papio anubis ENSPANG00000007910 I
ENSPANG00000016865 Papio anubis ENSPANG00000016865 I
ENSPANG00000020394 Papio anubis ENSPANG00000020394 I
ENSPFOG00000013532 Poecilia formosa ENSPFOG00000013532 I
ENSPFOG00000017279 Poecilia formosa ENSPFOG00000017279 I
ENSPFOG00000017488 Poecilia formosa ENSPFOG00000017488 I
ENSPFOG00000017498 Poecilia formosa ENSPFOG00000017498 I
ENSPPYG00000000338 Pongo abelii ENSPPYG00000000338 I
ENSPPYG00000004799 Pongo abelii ENSPPYG00000004799 I
ENSPPYG00000004800 Pongo abelii ENSPPYG00000004800 I
ENSPSIG00000012000 Pelodiscus sinensis ENSPSIG00000012000 I
ENSPSIG00000012468 Pelodiscus sinensis ENSPSIG00000012468 I
ENSSHAG00000013331 Sarcophilus harrisii ENSSHAG00000013331 I
ENSSHAG00000013391 Sarcophilus harrisii ENSSHAG00000013391 I
ENSSHAG00000016307 Sarcophilus harrisii ENSSHAG00000016307 I
ENSSSCG00000015475 Sus scrofa ENSSSCG00000015475 I
ENSSTOG00000015808 Ictidomys tridecemlineatus ENSSTOG00000015808 I
ENSSTOG00000015810 Ictidomys tridecemlineatus ENSSTOG00000015810 I
ENSSTOG00000028049 Ictidomys tridecemlineatus ENSSTOG00000028049 I
ENSTGUG00000007755 Taeniopygia guttata ENSTGUG00000007755 I
ENSTSYG00000003275 Tarsius syrichta ENSTSYG00000003275 I
ENSTSYG00000003282 Tarsius syrichta ENSTSYG00000003282 I
ENSTSYG00000009118 Tarsius syrichta ENSTSYG00000009118 I
ENSXMAG00000003931 Xiphophorus maculatus ENSXMAG00000003931 I
ENSXMAG00000007430 Xiphophorus maculatus ENSXMAG00000007430 I
ENSXMAG00000017492 Xiphophorus maculatus ENSXMAG00000017492 I
ENSXMAG00000017496 Xiphophorus maculatus ENSXMAG00000017496 I
estExt_fgenesh2_pg.C_2260029 Branchiostoma floridae estExt_fgenesh2_pg.C_2260029 I
estExt_gwp.C_290160 Branchiostoma floridae estExt_gwp.C_290160 I
Gfo_R003967 Geospiza fortis Gfo_R003967 I
Gfo_R007711 Geospiza fortis Gfo_R007711 I
MYF5 Anolis carolinensis ENSACAG00000014431 I
MYF5 Bos taurus ENSBTAG00000026972 I
MYF5 Canis familiaris ENSCAFG00000005808 I
MYF5 Choloepus hoffmanni ENSCHOG00000008319 I
MYF5 Callithrix jacchus ENSCJAG00000019340 I
MYF5 Cavia porcellus ENSCPOG00000007766 I
myf5 Danio rerio ENSDARG00000007277 I
MYF5 Dasypus novemcinctus ENSDNOG00000034747 I
Myf5 Dipodomys ordii ENSDORG00000015437 I
MYF5 Equus caballus ENSECAG00000020047 I
MYF5 Erinaceus europaeus ENSEEUG00000011612 I
MYF5 Echinops telfairi ENSETEG00000011255 I
MYF5 Felis catus ENSFCAG00000015011 I
MYF5 Homo sapiens ENSG00000111049 D
MYF5 Gallus gallus ENSGALG00000028091 I
MYF5 Gorilla gorilla ENSGGOG00000004366 I
MYF5 Loxodonta africana ENSLAFG00000016473 I
MYF5 Myotis lucifugus ENSMLUG00000004943 I
MYF5 Macaca mulatta ENSMMUG00000011669 I
MYF5 Monodelphis domestica ENSMODG00000020478 I
Myf5 Mus musculus ENSMUSG00000000435 D
MYF5 Ornithorhynchus anatinus ENSOANG00000004853 I
MYF5 Oryctolagus cuniculus ENSOCUG00000025477 I
MYF5 Otolemur garnettii ENSOGAG00000001039 I
MYF5 Ochotona princeps ENSOPRG00000009007 I
myf5 Oryzias latipes ENSORLG00000016257 I
MYF5 Procavia capensis ENSPCAG00000001722 I
MYF5 Pan troglodytes ENSPTRG00000005261 I
MYF5 Pteropus vampyrus ENSPVAG00000003336 I
Myf5 Rattus norvegicus ENSRNOG00000004768 I
MYF5 Sorex araneus ENSSARG00000008217 I
MYF5 Sus scrofa ENSSSCG00000000937 I
MYF5 Tupaia belangeri ENSTBEG00000008363 I
myf5 Tetraodon nigroviridis ENSTNIG00000011406 I
myf5 Takifugu rubripes ENSTRUG00000010781 I
MYF5 Tursiops truncatus ENSTTRG00000014691 I
MYF5 Vicugna pacos ENSVPAG00000001927 I
myf5 Xenopus tropicalis XB-GENE-493550 I
myf5.L Xenopus laevis XB-GENE-866267 I
MYF6 Anolis carolinensis ENSACAG00000022851 I
MYF6 Bos taurus ENSBTAG00000014003 I
MYF6 Canis familiaris ENSCAFG00000005805 I
MYF6 Callithrix jacchus ENSCJAG00000019339 I
myf6 Danio rerio ENSDARG00000029830 I
MYF6 Dasypus novemcinctus ENSDNOG00000019387 I
Myf6 Dipodomys ordii ENSDORG00000015435 I
MYF6 Equus caballus ENSECAG00000018919 I
MYF6 Felis catus ENSFCAG00000015010 I
MYF6 Homo sapiens ENSG00000111046 D
myf6 Gasterosteus aculeatus ENSGACG00000020008 I
MYF6 Gallus gallus ENSGALG00000010936 I
MYF6 Gorilla gorilla ENSGGOG00000004369 I
MYF6 Loxodonta africana ENSLAFG00000016476 I
MYF6 Microcebus murinus ENSMICG00000004274 I
MYF6 Myotis lucifugus ENSMLUG00000004940 I
MYF6 Macaca mulatta ENSMMUG00000011667 I
MYF6 Monodelphis domestica ENSMODG00000020477 I
Myf6 Mus musculus ENSMUSG00000035923 D
MYF6 Ornithorhynchus anatinus ENSOANG00000004854 I
MYF6 Oryctolagus cuniculus ENSOCUG00000001457 I
MYF6 Otolemur garnettii ENSOGAG00000001038 I
MYF6 Ochotona princeps ENSOPRG00000008999 I
myf6 Oryzias latipes ENSORLG00000016261 I
MYF6 Procavia capensis ENSPCAG00000001692 I
MYF6 Pan troglodytes ENSPTRG00000005260 I
MYF6 Pteropus vampyrus ENSPVAG00000003335 I
Myf6 Rattus norvegicus ENSRNOG00000004878 I
MYF6 Sorex araneus ENSSARG00000008211 I
MYF6 Sus scrofa ENSSSCG00000026533 I
MYF6 Tupaia belangeri ENSTBEG00000007822 I
MYF6 Taeniopygia guttata ENSTGUG00000007751 I
myf6 Tetraodon nigroviridis ENSTNIG00000011407 I
myf6 Takifugu rubripes ENSTRUG00000010842 I
MYF6 Tursiops truncatus ENSTTRG00000014689 I
MYF6 Vicugna pacos ENSVPAG00000001926 I
myf6 Xenopus tropicalis XB-GENE-998203 I
myf6.L Xenopus laevis XB-GENE-6252334 I
myf6.S Xenopus laevis XB-GENE-998208 I
myod1 Gasterosteus aculeatus ENSGACG00000008444 I
myod1 Gasterosteus aculeatus ENSGACG00000017350 I
myod1 Oryzias latipes ENSORLG00000000694 I
myod1 Tetraodon nigroviridis ENSTNIG00000002808 I
MYOG Anolis carolinensis ENSACAG00000004818 I
MYOG Bos taurus ENSBTAG00000006030 I
MYOG Canis familiaris ENSCAFG00000010309 I
MYOG Callithrix jacchus ENSCJAG00000006443 I
MYOG Cavia porcellus ENSCPOG00000023459 I
myog Danio rerio ENSDARG00000009438 I
MYOG Dasypus novemcinctus ENSDNOG00000032549 I
MYOG Equus caballus ENSECAG00000015955 I
MYOG Erinaceus europaeus ENSEEUG00000011702 I
MYOG Echinops telfairi ENSETEG00000003043 I
MYOG Felis catus ENSFCAG00000013108 I
MYOG Homo sapiens ENSG00000122180 D
myog Gasterosteus aculeatus ENSGACG00000000349 I
MYOG Gallus gallus ENSGALG00000000172 I
MYOG Gorilla gorilla ENSGGOG00000002115 I
MYOG Loxodonta africana ENSLAFG00000013113 I
MYOG Meleagris gallopavo ENSMGAG00000002212 I
MYOG Myotis lucifugus ENSMLUG00000016127 I
MYOG Monodelphis domestica ENSMODG00000001009 I
Myog Mus musculus ENSMUSG00000026459 D
MYOG Ornithorhynchus anatinus ENSOANG00000002107 I
MYOG Oryctolagus cuniculus ENSOCUG00000011548 I
MYOG Otolemur garnettii ENSOGAG00000029573 I
MYOG Ochotona princeps ENSOPRG00000014753 I
myog Oryzias latipes ENSORLG00000015906 I
MYOG Procavia capensis ENSPCAG00000006860 I
MYOG Pan troglodytes ENSPTRG00000001866 I
MYOG Pteropus vampyrus ENSPVAG00000013141 I
Myog Rattus norvegicus ENSRNOG00000030743 I
MYOG Tupaia belangeri ENSTBEG00000017364 I
MYOG Taeniopygia guttata ENSTGUG00000001380 I
myog Tetraodon nigroviridis ENSTNIG00000007278 I
myog Takifugu rubripes ENSTRUG00000001200 I
MYOG Tursiops truncatus ENSTTRG00000000710 I
MYOG Vicugna pacos ENSVPAG00000010566 I
myog Xenopus tropicalis XB-GENE-490105 I
myog.L Xenopus laevis XB-GENE-6252382 I
myog.S Xenopus laevis XB-GENE-865934 I
Myotis_brandtii_MYF5_10034131 Myotis brandtii Myotis_brandtii_MYF5_10034131 I
Myotis_brandtii_MYF6_10034130 Myotis brandtii Myotis_brandtii_MYF6_10034130 I
nRc.2.0.1.g24248 Romanomermis culicivorax nRc.2.0.1.g24248 I
Ogr08795 Ophisaurus gracilis Ogr08795 I
Pvit_10244 Pogona vitticeps Pvit_10244 I
Pvit_15256 Pogona vitticeps Pvit_15256 I
RPRC009735 Rhodnius prolixus RPRC009735 I
Sakowv30008488m.g Saccoglossus kowalevskii Sakowv30008488m.g I
SBAD_0001285401 Soboliphyme baturini SBAD_0001285401 I
SPU_021119 Strongylocentrotus purpuratus SPU_021119 I
TMUE_s0045001800 Trichuris muris TMUE_s0045001800 I
TTRE_0000002701 Trichuris trichiura TTRE_0000002701 I