CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GD15001
(
Drosophila simulans
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
FBgn0186673
T305441_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
eg
M03927_2.00
Drosophila melanogaster
NAAAYTRGAKCA
TGMTCYARTTTN
SELEX
Nitta et al.(2015)
eg_1
0.991
1.000
eg
M06415_2.00
Drosophila melanogaster
RAAANTAGRGCAV
BTGCYCTANTTTY
B1H
Zhu et al.(2011)
eg_SANGER_5_FBgn0000560
0.991
1.000
AGAP010438
M02389_2.00
Anopheles gambiae
NRGDKCRNN
NNYGMHCYN
PBM
Weirauch et al.(2014)
pTH6429
0.969
0.843
knrl
M03930_2.00
Drosophila melanogaster
AWNTRGRKCAN
NTGMYCYANWT
SELEX
Nitta et al.(2015)
knrl_1
0.965
0.829
knrl
M03931_2.00
Drosophila melanogaster
AWBBGTAACR
YGTTACVVWT
SELEX
Nitta et al.(2015)
knrl_2
0.965
0.829
knrl
M06422_2.00
Drosophila melanogaster
AAABTRGRKCA
TGMYCYAVTTT
B1H
Zhu et al.(2011)
knrl_SANGER_5_FBgn0001323
0.965
0.829
kni
M06557_2.00
Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT
B1H
Mathelier et al.(2014)
MA0451.1
0.958
0.800
kni
M06419_2.00
Drosophila melanogaster
RAWNKVGNWC
GWNCBMNWTY
B1H
Zhu et al.(2011)
kni_FlyReg_FBgn0001320
0.958
0.800
kni
M06420_2.00
Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT
B1H
Zhu et al.(2011)
kni_NAR_FBgn0001320
0.958
0.800
kni
M06421_2.00
Drosophila melanogaster
RWAANTRGRNCA
TGNYCYANTTWY
B1H
Zhu et al.(2011)
kni_SANGER_5_FBgn0001320
0.958
0.800
kni
M08225_2.00
Drosophila melanogaster
YAGNGYTGYC
GRCARCNCTR
ChIP-seq
Contrino et al.(2012)
Mf24
0.958
0.800
kni
M09687_2.00
Drosophila melanogaster
NAAWNKRGADCAV
BTGHTCYMNWTTN
Misc
Kulakovskiy et al.(2009)
kni
0.958
0.800
kni
M11189_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$KNI_Q6
0.958
0.800
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0213403
Nuclear receptor
11
81
QLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNIAAIAGCKHNGDCVINKKNRTACKACRLRKCLLVGMSK
Links
Other
Nuclear receptor
family TFs
Other
Drosophila simulans
TFs
97 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_01018
Capronia coronata
A1O1_01018
N
A1O5_04201
Cladophialophora psammophila
A1O5_04201
N
A1O7_00075
Cladophialophora yegresii
A1O7_00075
N
A1O9_05872
Exophiala aquamarina
A1O9_05872
N
CGGC5_4513
Colletotrichum gloeosporioides
CGGC5_4513
N
CH063_15788
Colletotrichum higginsianum
CH063_15788
N
CHGG_05804
Chaetomium globosum
CHGG_05804
N
Cob_06597
Colletotrichum orbiculare
Cob_06597
N
CTHT_0025430
Chaetomium thermophilum
CTHT_0025430
N
FOXG_02222
Fusarium oxysporum
FOXG_02222
N
G647_00085
Cladophialophora carrionii
G647_00085
N
HMPREF1120_00699
Exophiala dermatitidis
HMPREF1120_00699
N
HMPREF1541_07769
Cyphellophora europaea
HMPREF1541_07769
N
MYCTH_81165
Myceliophthora thermophila
MYCTH_81165
N
PV06_03637
Exophiala oligosperma
PV06_03637
N
PV08_06048
Exophiala spinifera
PV08_06048
N
PV11_07820
Exophiala sideris
PV11_07820
N
PVAR5_3049
Byssochlamys spectabilis
PVAR5_3049
N
THITE_2119700
Thielavia terrestris
THITE_2119700
N
Z518_07969
Rhinocladiella mackenziei
Z518_07969
N