PPA10478 (Pristionchus pacificus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 PPA10478 T305877_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-86
M02415_2.00 		Caenorhabditis elegans
KTGTAGTC
GACTACAM		 PBM
Weirauch et al.(2014)
pTH8598 		0.855 0.557
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA10478 Nuclear receptor 7 77

Links

Other Nuclear receptor family TFs
Other Pristionchus pacificus TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava2458.valid.m1 Manihot esculenta cassava2458.valid.m1 N 0.000
chr4.LjB15O07.50.nc Lotus japonicus chr4.LjB15O07.50.nc I 0.000
Ciclev10021342m.g Citrus clementina Ciclev10021342m.g I 0.000
Eucgr.K02659 Eucalyptus grandis Eucgr.K02659 I 0.000
GLYMA05G07980 Glycine max GLYMA05G07980 I 0.000
Gorai.006G063000 Gossypium raimondii Gorai.006G063000 I 0.000
Pm030197 Prunus mume Pm030197 I 0.000
PRUPE_ppa009092mg Prunus persica PRUPE_ppa009092mg I 0.000
Solyc03g119740.2 Solanum lycopersicum Solyc03g119740.2 I 0.000
TCM_012262 Theobroma cacao TCM_012262 I 0.000
VIT_17s0000g04130 Vitis vinifera VIT_17s0000g04130 I 0.000