CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PPA14290
(
Pristionchus pacificus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
PPA14290
T305890_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-232
M00700_2.00
Caenorhabditis elegans
NNTNTDWYN
NRWHANANN
PBM
Narasimhan et al.(2015)
pTH10647
0.831
0.597
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA14290
Nuclear receptor
6
68
FRHSAHFGVDSCRACAAFFRRTVSLNKTYICRQSNERCDVSKDAKFACRRCRYKRCLEIGMHP
Links
Other
Nuclear receptor
family TFs
Other
Pristionchus pacificus
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL013408
Aedes aegypti
AAEL013408
I
AALB004583
Anopheles albimanus
AALB004583
I
Aan_R010721
Calypte anna
Aan_R010721
I
AARA003510
Anopheles arabiensis
AARA003510
I
AATE015987
Anopheles atroparvus
AATE015987
I
ACEP13992
Atta cephalotes
ACEP13992
I
ACHR007416
Anopheles christyi
ACHR007416
I
ACOM036369
Anopheles coluzzii
ACOM036369
I
ACUA011008
Anopheles culicifacies
ACUA011008
I
ACYPI005878
Acyrthosiphon pisum
ACYPI005878
N
ACYPI29974
Acyrthosiphon pisum
ACYPI29974
N
ACYPI34776
Acyrthosiphon pisum
ACYPI34776
N
ADAC006957
Anopheles darlingi
ADAC006957
I
ADIR001685
Anopheles dirus
ADIR001685
I
AEPI005273
Anopheles epiroticus
AEPI005273
I
AFAF013455
Anopheles farauti
AFAF013455
I
Afo_R011879
Aptenodytes forsteri
Afo_R011879
I
AFUN005053
Anopheles funestus
AFUN005053
I
AGAP004905
Anopheles gambiae
AGAP004905
I
Alligator_sinensis_CCG021031.1
Alligator sinensis
Alligator_sinensis_CCG021031.1
I
AMAM018568
Anopheles maculatus
AMAM018568
I
AMEC000569
Anopheles melas
AMEC000569
I
AMEM010249
Anopheles merus
AMEM010249
I
AMIN011402
Anopheles minimus
AMIN011402
I
AQUA000322
Anopheles quadriannulatus
AQUA000322
I
ASIS014192
Anopheles sinensis
ASIS014192
I
ASTEI10643
Anopheles stephensi
ASTEI10643
I
BGIBMGA002019
Bombyx mori
BGIBMGA002019
I
BGLB009094
Biomphalaria glabrata
BGLB009094
I
CapteG228571
Capitella teleta
CapteG228571
I
Cflo_07037--XP_395757.2_APIME
Camponotus floridanus
Cflo_07037--XP_395757.2_APIME
I
CGI_10012910
Crassostrea gigas
CGI_10012910
I
CLEC001236
Cimex lectularius
CLEC001236
I
Cmyd_10004045
Chelonia mydas
Cmyd_10004045
I
CPIJ007045
Culex quinquefasciatus
CPIJ007045
I
CpipJ_CPIJ007045
Culex pipiens
CpipJ_CPIJ007045
I
DEAF1
Anolis carolinensis
ENSACAG00000015102
I
DEAF1
Canis familiaris
ENSCAFG00000006569
I
DEAF1
Callithrix jacchus
ENSCJAG00000011996
I
DEAF1
Cavia porcellus
ENSCPOG00000006073
I
deaf1
Danio rerio
ENSDARG00000088844
I
DEAF1
Dasypus novemcinctus
ENSDNOG00000000274
I
Deaf1
Dipodomys ordii
ENSDORG00000015737
I
DEAF1
Equus caballus
ENSECAG00000010151
I
DEAF1
Felis catus
ENSFCAG00000007591
I
DEAF1
Homo sapiens
ENSG00000177030
I
deaf1
Gasterosteus aculeatus
ENSGACG00000008942
I
DEAF1
Gorilla gorilla
ENSGGOG00000014020
I
DEAF1
Loxodonta africana
ENSLAFG00000023242
I
DEAF1
Meleagris gallopavo
ENSMGAG00000003765
I
DEAF1
Microcebus murinus
ENSMICG00000001602
I
DEAF1
Myotis lucifugus
ENSMLUG00000026576
I
DEAF1
Macaca mulatta
ENSMMUG00000002660
I
Deaf1
Mus musculus
ENSMUSG00000058886
I
DEAF1
Otolemur garnettii
ENSOGAG00000006434
I
deaf1
Oryzias latipes
ENSORLG00000019407
I
DEAF1
Pan troglodytes
ENSPTRG00000003129
D
DEAF1
Pteropus vampyrus
ENSPVAG00000006883
I
Deaf1
Rattus norvegicus
ENSRNOG00000017960
I
DEAF1
Sus scrofa
ENSSSCG00000012850
I
DEAF1
Taeniopygia guttata
ENSTGUG00000007185
I
deaf1
Tetraodon nigroviridis
ENSTNIG00000016068
I
deaf1
Takifugu rubripes
ENSTRUG00000002931
I
DEAF1
Tursiops truncatus
ENSTTRG00000015418
I
deaf1
Xenopus tropicalis
XB-GENE-1216227
I
ENSAMEG00000010672
Ailuropoda melanoleuca
ENSAMEG00000010672
I
ENSAMXG00000016516
Astyanax mexicanus
ENSAMXG00000016516
I
ENSAPLG00000011215
Anas platyrhynchos
ENSAPLG00000011215
I
ENSCSAG00000010763
Chlorocebus sabaeus
ENSCSAG00000010763
I
ENSFALG00000010923
Ficedula albicollis
ENSFALG00000010923
I
ENSGALG00000005089
Gallus gallus
ENSGALG00000005089
I
ENSGMOG00000000222
Gadus morhua
ENSGMOG00000000222
I
ENSLACG00000014207
Latimeria chalumnae
ENSLACG00000014207
I
ENSLOCG00000002360
Lepisosteus oculatus
ENSLOCG00000002360
I
ENSMEUG00000005016
Macropus eugenii
ENSMEUG00000005016
I
ENSMPUG00000008992
Mustela putorius furo
ENSMPUG00000008992
I
ENSNLEG00000008479
Nomascus leucogenys
ENSNLEG00000008479
I
ENSOARG00000006285
Ovis aries
ENSOARG00000006285
I
ENSONIG00000003936
Oreochromis niloticus
ENSONIG00000003936
I
ENSOPRG00000002240
Ochotona princeps
ENSOPRG00000002240
I
ENSP00000371846
Macaca fascicularis
ENSP00000371846
I
ENSP00000371846-D1
Bos grunniens
ENSP00000371846-D1
I
ENSPANG00000008597
Papio anubis
ENSPANG00000008597
I
ENSPFOG00000014257
Poecilia formosa
ENSPFOG00000014257
I
ENSPMAG00000004264
Petromyzon marinus
ENSPMAG00000004264
I
ENSPSIG00000016545
Pelodiscus sinensis
ENSPSIG00000016545
I
ENSSHAG00000002042
Sarcophilus harrisii
ENSSHAG00000002042
I
ENSSTOG00000004165
Ictidomys tridecemlineatus
ENSSTOG00000004165
I
ENSXMAG00000013352
Xiphophorus maculatus
ENSXMAG00000013352
I
fgenesh2_pg.scaffold_59000067
Branchiostoma floridae
fgenesh2_pg.scaffold_59000067
I
fgenesh2_pg.scaffold_59000072
Branchiostoma floridae
fgenesh2_pg.scaffold_59000072
I
Gfo_R011899
Geospiza fortis
Gfo_R011899
I
HHAL006904-PA
Halyomorpha halys
HHAL006904-PA
I
HMEL013517
Heliconius melpomene
HMEL013517
I
Hsal_03559--XP_395757.2_APIME
Harpegnathos saltator
Hsal_03559--XP_395757.2_APIME
I
ISCW003915
Ixodes scapularis
ISCW003915
I
KGM_18605
Danaus plexippus
KGM_18605
I
L798_01684
Zootermopsis nevadensis
L798_01684
I
LDEC013410
Leptinotarsa decemlineata
LDEC013410
I
LLOJ006782
Lutzomyia longipalpis
LLOJ006782
I
LotgiG168359
Lottia gigantea
LotgiG168359
I
MCINX013640
Melitaea cinxia
MCINX013640
I
Myotis_brandtii_DEAF1_10008461
Myotis brandtii
Myotis_brandtii_DEAF1_10008461
I
NV18168
Nasonia vitripennis
NV18168
I
Ocbimv22013386m.g
Octopus bimaculoides
Ocbimv22013386m.g
I
Ogr05554
Ophisaurus gracilis
Ogr05554
I
PHUM581340
Pediculus humanus
PHUM581340
I
PPAI007052
Phlebotomus papatasi
PPAI007052
I
Pvit_08245
Pogona vitticeps
Pvit_08245
I
RPRC001228
Rhodnius prolixus
RPRC001228
I
Sakowv30032927m.g
Saccoglossus kowalevskii
Sakowv30032927m.g
I
SINV20880
Solenopsis invicta
SINV20880
I
SMAR003119
Strigamia maritima
SMAR003119
I
SPU_014381
Strongylocentrotus purpuratus
SPU_014381
N
TC000085
Tribolium castaneum
TC000085
I
YQE_06816
Dendroctonus ponderosae
YQE_06816
I