CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ppa-nhr-47
(
Pristionchus pacificus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
PPA28835
T305940_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA28835
Nuclear receptor
9
74
TLCVVCDDLATGNHYSVPSCNGCKTFFRRAVVNNRNFACMGNEDCPVNKAIQNDRDRIGYTKRTRK
Links
Other
Nuclear receptor
family TFs
Other
Pristionchus pacificus
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FFUJ_07008
Fusarium fujikuroi
FFUJ_07008
N
FOXG_04965
Fusarium oxysporum
FOXG_04965
N
FVEG_03169
Fusarium verticillioides
FVEG_03169
N
GALMADRAFT_506107
Galerina marginata
GALMADRAFT_506107
N
K443DRAFT_83569
Laccaria amethystina
K443DRAFT_83569
N
LACBIDRAFT_316453
Laccaria bicolor
LACBIDRAFT_316453
N
Moror_6330
Moniliophthora roreri
Moror_6330
N
PAXRUDRAFT_135686
Paxillus rubicundulus
PAXRUDRAFT_135686
N
PILCRDRAFT_672333
Piloderma croceum
PILCRDRAFT_672333
N
PISMIDRAFT_674561
Pisolithus microcarpus
PISMIDRAFT_674561
N
PLEOSDRAFT_158019
Pleurotus ostreatus
PLEOSDRAFT_158019
N
SCHCODRAFT_111498
Schizophyllum commune
SCHCODRAFT_111498
N
SCLCIDRAFT_19528
Scleroderma citrinum
SCLCIDRAFT_19528
N