CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ppa-nhr-47
(
Pristionchus pacificus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
PPA28835
T305940_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA28835
Nuclear receptor
9
74
TLCVVCDDLATGNHYSVPSCNGCKTFFRRAVVNNRNFACMGNEDCPVNKAIQNDRDRIGYTKRTRK
Links
Other
Nuclear receptor
family TFs
Other
Pristionchus pacificus
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NBR_0000088601
Nippostrongylus brasiliensis
NBR_0000088601
N
0.974
scaffold314-EXSNAP2012.19
Pristionchus exspectatus
scaffold314-EXSNAP2012.19
I
0.825
ASIM_0001308601
Anisakis simplex
ASIM_0001308601
I
0.794
ASU_10584
Ascaris suum
ASU_10584
I
0.785
L596_g19151
Steinernema carpocapsae
L596_g19151
I
0.785
L889_g22901
Steinernema feltiae
L889_g22901
I
0.785
L892_g5079
Steinernema scapterisci
L892_g5079
I
0.785
L893_g15276
Steinernema glaseri
L893_g15276
I
0.785
L898_g8573
Steinernema monticolum
L898_g8573
I
0.785
SMUV_0000475001
Syphacia muris
SMUV_0000475001
I
0.757