CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NBR_0000088601
(
Nippostrongylus brasiliensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
NBR_0000088601
T309712_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NBR_0000088601-mRNA-1
Nuclear receptor
11
77
TLCVVCEDIATGNHYSVPSCNGCKTFFRRAVVNNRTFTCMGNGDCPVNKAIQNDRDRIGYTKRTRKS
Links
Other
Nuclear receptor
family TFs
Other
Nippostrongylus brasiliensis
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ppa-nhr-47
Pristionchus pacificus
PPA28835
N
0.974
NBR_0001576001
Nippostrongylus brasiliensis
NBR_0001576001
I
0.807
ASIM_0001308601
Anisakis simplex
ASIM_0001308601
I
0.796
HCOI00673400
Haemonchus contortus
HCOI00673400
I
0.789
HCOI01687000
Haemonchus contortus
HCOI01687000
I
0.789
ASU_10584
Ascaris suum
ASU_10584
I
0.787
L596_g19151
Steinernema carpocapsae
L596_g19151
I
0.787
L889_g22901
Steinernema feltiae
L889_g22901
I
0.787
L892_g5079
Steinernema scapterisci
L892_g5079
I
0.787
L893_g15276
Steinernema glaseri
L893_g15276
I
0.787
L898_g8573
Steinernema monticolum
L898_g8573
I
0.787
ACOC_0000869501
Angiostrongylus costaricensis
ACOC_0000869501
I
0.771
HPBE_0001154501
Heligmosomoides bakeri
HPBE_0001154501
I
0.771
SMUV_0000475001
Syphacia muris
SMUV_0000475001
I
0.757
scaffold314-EXSNAP2012.19
Pristionchus exspectatus
scaffold314-EXSNAP2012.19
I
0.751