TC003413 (Tribolium castaneum)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 TC003413 T306070_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGAP010438
M02389_2.00 		Anopheles gambiae
NRGDKCRNN
NNYGMHCYN		 PBM
Weirauch et al.(2014)
pTH6429 		0.988 0.971
knrl
M03930_2.00 		Drosophila melanogaster
AWNTRGRKCAN
NTGMYCYANWT		 SELEX
Nitta et al.(2015)
knrl_1 		0.987 0.957
knrl
M03931_2.00 		Drosophila melanogaster
AWBBGTAACR
YGTTACVVWT		 SELEX
Nitta et al.(2015)
knrl_2 		0.987 0.957
knrl
M06422_2.00 		Drosophila melanogaster
AAABTRGRKCA
TGMYCYAVTTT		 B1H
Zhu et al.(2011)
knrl_SANGER_5_FBgn0001323 		0.987 0.957
kni
M06557_2.00 		Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT		 B1H
Mathelier et al.(2014)
MA0451.1 		0.983 0.871
kni
M06419_2.00 		Drosophila melanogaster
RAWNKVGNWC
GWNCBMNWTY		 B1H
Zhu et al.(2011)
kni_FlyReg_FBgn0001320 		0.983 0.871
kni
M06420_2.00 		Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT		 B1H
Zhu et al.(2011)
kni_NAR_FBgn0001320 		0.983 0.871
kni
M06421_2.00 		Drosophila melanogaster
RWAANTRGRNCA
TGNYCYANTTWY		 B1H
Zhu et al.(2011)
kni_SANGER_5_FBgn0001320 		0.983 0.871
kni
M08225_2.00 		Drosophila melanogaster
YAGNGYTGYC
GRCARCNCTR		 ChIP-seq
Contrino et al.(2012)
Mf24 		0.983 0.871
kni
M09687_2.00 		Drosophila melanogaster
NAAWNKRGADCAV
BTGHTCYMNWTTN		 Misc
Kulakovskiy et al.(2009)
kni 		0.983 0.871
kni
M11189_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$KNI_Q6 		0.983 0.871
eg
M03927_2.00 		Drosophila melanogaster
NAAAYTRGAKCA
TGMTCYARTTTN		 SELEX
Nitta et al.(2015)
eg_1 		0.969 0.857
eg
M06415_2.00 		Drosophila melanogaster
RAAANTAGRGCAV
BTGCYCTANTTTY		 B1H
Zhu et al.(2011)
eg_SANGER_5_FBgn0000560 		0.969 0.857
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TC003413-PA Nuclear receptor 103 173

Links

Other Nuclear receptor family TFs
Other Tribolium castaneum TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARB_04772 Arthroderma benhamiae ARB_04772 N 0.000
BDDG_00804 Blastomyces dermatitidis BDDG_00804 N 0.000
CIMG_05222 Coccidioides immitis CIMG_05222 N 0.000
CPC735_064900 Coccidioides posadasii CPC735_064900 N 0.000
H101_07738 Trichophyton interdigitale H101_07738 N 0.000
H102_05875 Trichophyton rubrum H102_05875 N 0.000
HCBG_01014 Histoplasma capsulatum HCBG_01014 N 0.000
MCYG_04260 Microsporum canis MCYG_04260 N 0.000
MCYG_04260 Arthroderma otae MCYG_04260 N 0.000
MGYG_02348 Microsporum gypseum MGYG_02348 N 0.000
PAAG_06200 Paracoccidioides sp lutzii PAAG_06200 N 0.000
PABG_05221 Paracoccidioides brasiliensis PABG_05221 N 0.000
TEQG_08051 Trichophyton equinum TEQG_08051 N 0.000
TESG_01289 Trichophyton tonsurans TESG_01289 N 0.000
TRV_06373 Trichophyton verrucosum TRV_06373 N 0.000
UREG_06397 Uncinocarpus reesii UREG_06397 N 0.000