AFAF014433 (Anopheles farauti)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 AFAF014433 T307611_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGAP010438
M02389_2.00 		Anopheles gambiae
NRGDKCRNN
NNYGMHCYN		 PBM
Weirauch et al.(2014)
pTH6429 		0.988 1.000
knrl
M03930_2.00 		Drosophila melanogaster
AWNTRGRKCAN
NTGMYCYANWT		 SELEX
Nitta et al.(2015)
knrl_1 		0.987 0.957
knrl
M03931_2.00 		Drosophila melanogaster
AWBBGTAACR
YGTTACVVWT		 SELEX
Nitta et al.(2015)
knrl_2 		0.987 0.957
knrl
M06422_2.00 		Drosophila melanogaster
AAABTRGRKCA
TGMYCYAVTTT		 B1H
Zhu et al.(2011)
knrl_SANGER_5_FBgn0001323 		0.987 0.957
kni
M06557_2.00 		Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT		 B1H
Mathelier et al.(2014)
MA0451.1 		0.983 0.871
kni
M06419_2.00 		Drosophila melanogaster
RAWNKVGNWC
GWNCBMNWTY		 B1H
Zhu et al.(2011)
kni_FlyReg_FBgn0001320 		0.983 0.871
kni
M06420_2.00 		Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT		 B1H
Zhu et al.(2011)
kni_NAR_FBgn0001320 		0.983 0.871
kni
M06421_2.00 		Drosophila melanogaster
RWAANTRGRNCA
TGNYCYANTTWY		 B1H
Zhu et al.(2011)
kni_SANGER_5_FBgn0001320 		0.983 0.871
kni
M08225_2.00 		Drosophila melanogaster
YAGNGYTGYC
GRCARCNCTR		 ChIP-seq
Contrino et al.(2012)
Mf24 		0.983 0.871
kni
M09687_2.00 		Drosophila melanogaster
NAAWNKRGADCAV
BTGHTCYMNWTTN		 Misc
Kulakovskiy et al.(2009)
kni 		0.983 0.871
kni
M11189_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$KNI_Q6 		0.983 0.871
eg
M03927_2.00 		Drosophila melanogaster
NAAAYTRGAKCA
TGMTCYARTTTN		 SELEX
Nitta et al.(2015)
eg_1 		0.969 0.843
eg
M06415_2.00 		Drosophila melanogaster
RAAANTAGRGCAV
BTGCYCTANTTTY		 B1H
Zhu et al.(2011)
eg_SANGER_5_FBgn0000560 		0.969 0.843
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AFAF014433-PA Nuclear receptor 3 73

Links

Other Nuclear receptor family TFs
Other Anopheles farauti TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00004p00067720 Amborella trichopoda AMTR_s00004p00067720 N 0.000
BGIOSGA010118 Oryza indica BGIOSGA010118 N 0.000
BRADI1G13207 Brachypodium distachyon BRADI1G13207 N 0.000
cassava10020.m1 Manihot esculenta cassava10020.m1 N 0.000
Ciclev10017173m.g Citrus clementina Ciclev10017173m.g N 0.000
Eucgr.J01756 Eucalyptus grandis Eucgr.J01756 N 0.000
F775_42487 Aegilops tauschii F775_42487 N 0.000
gene01596-v1.0-hybrid Fragaria vesca gene01596-v1.0-hybrid N 0.000
GRMZM2G149219 Zea mays GRMZM2G149219 N 0.000
GRMZM2G161411 Zea mays GRMZM2G161411 N 0.000
GSMUA_Achr3G30880_001 Musa acuminata GSMUA_Achr3G30880_001 N 0.000
LPERR03G23380 Leersia perrieri LPERR03G23380 N 0.000
MLOC_16746 Hordeum vulgare MLOC_16746 N 0.000
MLOC_19031 Hordeum vulgare MLOC_19031 I 0.000
OB03G35830 Oryza brachyantha OB03G35830 N 0.000
OBART03G28190 Oryza barthii OBART03G28190 N 0.000
OGLUM03G28820 Oryza glumaepatula OGLUM03G28820 N 0.000
OMERI03G24810 Oryza meridionalis OMERI03G24810 N 0.000
ONIVA03G29220 Oryza nivara ONIVA03G29220 N 0.000
OPUNC03G25700 Oryza punctata OPUNC03G25700 N 0.000
orange1.1g032690m.g Citrus sinensis orange1.1g032690m.g N 0.000
ORGLA03G0260500 Oryza glaberrima ORGLA03G0260500 N 0.000
ORUFI03G29320 Oryza rufipogon ORUFI03G29320 N 0.000
OS03G0657400 Oryza sativa OS03G0657400 N 0.000
Pavir.J22786 Panicum virgatum Pavir.J22786 N 0.000
POPTR_0001s03970 Populus trichocarpa POPTR_0001s03970 N 0.000
POPTR_0003s20860 Populus trichocarpa POPTR_0003s20860 N 0.000
SapurV1A.0081s0610 Salix purpurea SapurV1A.0081s0610 N 0.000
Sb01g012870 Sorghum bicolor Sb01g012870 N 0.000
Si038001m.g Setaria italica Si038001m.g N 0.000
Si038955m.g Setaria italica Si038955m.g N 0.000
TRAES3BF090100100CFD_g Triticum aestivum TRAES3BF090100100CFD_g I 0.000
Traes_3AL_3160E1F30 Triticum aestivum Traes_3AL_3160E1F30 I 0.000
Traes_4DS_CFC487CE5 Triticum aestivum Traes_4DS_CFC487CE5 N 0.000
TRIUR3_13881 Triticum urartu TRIUR3_13881 N 0.000
TRIUR3_34281 Triticum urartu TRIUR3_34281 I 0.000