L892_g10708 (Steinernema scapterisci)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L892_g10708 T309158_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-86
M02415_2.00 		Caenorhabditis elegans
KTGTAGTC
GACTACAM		 PBM
Weirauch et al.(2014)
pTH8598 		0.865 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L892_g10708.t1 Nuclear receptor 10 80

Links

Other Nuclear receptor family TFs
Other Steinernema scapterisci TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29738.m001046 Ricinus communis 29738.m001046 I
29912.m005354 Ricinus communis 29912.m005354 I
29917.m002016 Ricinus communis 29917.m002016 I
AMTR_s00049p00217400 Amborella trichopoda AMTR_s00049p00217400 I
anac075 Arabidopsis thaliana AT4G29230 D
anac075 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7001013 I
Aquca_054_00006 Aquilegia coerulea Aquca_054_00006 I
BGIOSGA002220 Oryza indica BGIOSGA002220 I
BGIOSGA006133 Oryza indica BGIOSGA006133 N
BGIOSGA018654 Oryza indica BGIOSGA018654 I
Bo1g016630 Brassica oleracea Bo1g016630 I
Bo7g113660 Brassica oleracea Bo7g113660 I
Bostr.7867s0767 Boechera stricta Bostr.7867s0767 I
Bra011090 Brassica rapa Bra011090 I
Bra024152 Brassica rapa Bra024152 I
BRADI2G33307 Brachypodium distachyon BRADI2G33307 I
BRADI3G47627 Brachypodium distachyon BRADI3G47627 I
Cagra.0495s0057 Capsella grandiflora Cagra.0495s0057 I
Carubv10004602m.g Capsella rubella Carubv10004602m.g I
cassava11584.m1 Manihot esculenta cassava11584.m1 I
cassava12330.valid.m1 Manihot esculenta cassava12330.valid.m1 I
cassava14633.m1 Manihot esculenta cassava14633.m1 I
cassava3690.m1 Manihot esculenta cassava3690.m1 I
cassava44586.m1 Manihot esculenta cassava44586.m1 I
Ca_23230 Cicer arietinum Ca_23230 N
chr1.CM0001.370.nd Lotus japonicus chr1.CM0001.370.nd N
chr2.CM0749.410.nc Lotus japonicus chr2.CM0749.410.nc I
Ciclev10015507m.g Citrus clementina Ciclev10015507m.g I
Cla004701 Citrullus lanatus Cla004701 I
Cla011431 Citrullus lanatus Cla011431 I
Cla020673 Citrullus lanatus Cla020673 I
Cucsa.011210 Cucumis sativus Cucsa.011210 I
Cucsa.283900 Cucumis sativus Cucsa.283900 I
Cucsa.288680 Cucumis sativus Cucsa.288680 I
Eucgr.C00958 Eucalyptus grandis Eucgr.C00958 I
Eucgr.J02254 Eucalyptus grandis Eucgr.J02254 I
evm.TU.supercontig_78.40 Carica papaya evm.TU.supercontig_78.40 I
F775_14938 Aegilops tauschii F775_14938 N
F775_30638 Aegilops tauschii F775_30638 I
gene03875-v1.0-hybrid Fragaria vesca gene03875-v1.0-hybrid I
gene11344-v1.0-hybrid Fragaria vesca gene11344-v1.0-hybrid I
gene27940-v1.0-hybrid Fragaria vesca gene27940-v1.0-hybrid I
GLYMA01G00880 Glycine max GLYMA01G00880 I
GLYMA01G22510 Glycine max GLYMA01G22510 I
GLYMA02G11140 Glycine max GLYMA02G11140 I
GLYMA05G09110 Glycine max GLYMA05G09110 I
GLYMA05G36031 Glycine max GLYMA05G36031 I
GLYMA08G03590 Glycine max GLYMA08G03590 I
GLYMA16G07501 Glycine max GLYMA16G07501 N
GLYMA19G00640 Glycine max GLYMA19G00640 N
GLYMA19G08510 Glycine max GLYMA19G08510 N
GLYMA20G32690 Glycine max GLYMA20G32690 I
Gorai.006G034600 Gossypium raimondii Gorai.006G034600 I
Gorai.007G075300 Gossypium raimondii Gorai.007G075300 I
Gorai.008G186300 Gossypium raimondii Gorai.008G186300 I
Gorai.009G028900 Gossypium raimondii Gorai.009G028900 I
Gorai.010G078900 Gossypium raimondii Gorai.010G078900 I
GRMZM2G038073 Zea mays GRMZM2G038073 N
GRMZM2G104078 Zea mays GRMZM2G104078 N
GRMZM2G112681 Zea mays GRMZM2G112681 I
GRMZM2G166721 Zea mays GRMZM2G166721 I
GSMUA_Achr2G16590_001 Musa acuminata GSMUA_Achr2G16590_001 I
GSMUA_Achr3G07330_001 Musa acuminata GSMUA_Achr3G07330_001 I
GSMUA_Achr6G05480_001 Musa acuminata GSMUA_Achr6G05480_001 I
GSMUA_Achr7G09510_001 Musa acuminata GSMUA_Achr7G09510_001 I
GSMUA_Achr9G01880_001 Musa acuminata GSMUA_Achr9G01880_001 I
GSMUA_AchrUn_randomG17050_001 Musa acuminata GSMUA_AchrUn_randomG17050_001 I
GSMUA_AchrUn_randomG28610_001 Musa acuminata GSMUA_AchrUn_randomG28610_001 I
LPERR01G05530 Leersia perrieri LPERR01G05530 I
LPERR02G18380 Leersia perrieri LPERR02G18380 N
LPERR05G05170 Leersia perrieri LPERR05G05170 I
Lus10003668.g Linum usitatissimum Lus10003668.g N
Lus10021708.g Linum usitatissimum Lus10021708.g I
MDP0000124509 Malus domestica MDP0000124509 I
MDP0000283975 Malus domestica MDP0000283975 N
MDP0000663564 Malus domestica MDP0000663564 I
mgf018486m Mimulus guttatus mgf018486m I
MTR_5g053430 Medicago truncatula MTR_5g053430 I
MTR_7g033320 Medicago truncatula MTR_7g033320 I
OB01G15780 Oryza brachyantha OB01G15780 I
OB02G30060 Oryza brachyantha OB02G30060 N
OB05G15600 Oryza brachyantha OB05G15600 I
OBART01G05840 Oryza barthii OBART01G05840 I
OBART02G22660 Oryza barthii OBART02G22660 N
OBART05G06140 Oryza barthii OBART05G06140 I
OGLUM01G06390 Oryza glumaepatula OGLUM01G06390 I
OGLUM02G22980 Oryza glumaepatula OGLUM02G22980 N
OGLUM05G06420 Oryza glumaepatula OGLUM05G06420 I
OLONG_008708 Oryza longistaminata OLONG_008708 I
OLONG_021085 Oryza longistaminata OLONG_021085 I
OLONG_021848 Oryza longistaminata OLONG_021848 N
OMERI02G22200 Oryza meridionalis OMERI02G22200 N
ONIVA01G06690 Oryza nivara ONIVA01G06690 I
ONIVA02G25300 Oryza nivara ONIVA02G25300 N
ONIVA05G06750 Oryza nivara ONIVA05G06750 I
OPUNC01G05680 Oryza punctata OPUNC01G05680 I
OPUNC02G20570 Oryza punctata OPUNC02G20570 N
OPUNC04G13980 Oryza punctata OPUNC04G13980 N
ORGLA01G0055000 Oryza glaberrima ORGLA01G0055000 I
ORGLA02G0193300 Oryza glaberrima ORGLA02G0193300 N
ORGLA05G0055000 Oryza glaberrima ORGLA05G0055000 I
ORUFI01G06380 Oryza rufipogon ORUFI01G06380 I
ORUFI02G23890 Oryza rufipogon ORUFI02G23890 N
ORUFI05G06530 Oryza rufipogon ORUFI05G06530 I
OS01G0191300 Oryza sativa OS01G0191300 I
OS02G0594800 Oryza sativa OS02G0594800 N
OS05G0194500 Oryza sativa OS05G0194500 I
Pavir.Aa01341 Panicum virgatum Pavir.Aa01341 I
Pavir.Ab02181 Panicum virgatum Pavir.Ab02181 I
Pavir.Da01643 Panicum virgatum Pavir.Da01643 I
Pavir.Eb00261 Panicum virgatum Pavir.Eb00261 I
Pavir.Ga01597 Panicum virgatum Pavir.Ga01597 I
Pavir.Gb01338 Panicum virgatum Pavir.Gb01338 I
Pavir.J13205 Panicum virgatum Pavir.J13205 I
PDK_20s1381351g001 Phoenix dactylifera PDK_20s1381351g001 I
PGSC0003DMG400000809 Solanum tuberosum PGSC0003DMG400000809 I
PGSC0003DMG400012607 Solanum tuberosum PGSC0003DMG400012607 I
PGSC0003DMG400016896 Solanum tuberosum PGSC0003DMG400016896 I
PK17141.1 Cannabis sativa PK17141.1 I
PK25812.1 Cannabis sativa PK25812.1 I
PK27085.1 Cannabis sativa PK27085.1 D
Pm015625 Prunus mume Pm015625 I
Pm027280 Prunus mume Pm027280 I
POPTR_0001s35490 Populus trichocarpa POPTR_0001s35490 I
POPTR_0006s15740 Populus trichocarpa POPTR_0006s15740 I
POPTR_0008s11550 Populus trichocarpa POPTR_0008s11550 I
POPTR_0010s13980 Populus trichocarpa POPTR_0010s13980 I
POPTR_0018s06790 Populus trichocarpa POPTR_0018s06790 I
PRUPE_ppa004775mg Prunus persica PRUPE_ppa004775mg I
PRUPE_ppa006948mg Prunus persica PRUPE_ppa006948mg I
SapurV1A.0079s0500 Salix purpurea SapurV1A.0079s0500 I
SapurV1A.0212s0190 Salix purpurea SapurV1A.0212s0190 I
SapurV1A.0304s0050 Salix purpurea SapurV1A.0304s0050 I
SapurV1A.0716s0010 Salix purpurea SapurV1A.0716s0010 I
SapurV1A.1259s0030 Salix purpurea SapurV1A.1259s0030 I
SapurV1A.1388s0020 Salix purpurea SapurV1A.1388s0020 I
SapurV1A.2846s0020 Salix purpurea SapurV1A.2846s0020 I
Sb03g003170 Sorghum bicolor Sb03g003170 I
Sb04g024780 Sorghum bicolor Sb04g024780 N
Sb06g020103 Sorghum bicolor Sb06g020103 I
Sb10g009670 Sorghum bicolor Sb10g009670 I
Si001527m.g Setaria italica Si001527m.g I
Si012740m.g Setaria italica Si012740m.g N
Si017393m.g Setaria italica Si017393m.g I
SOG1 Vitis vinifera VIT_01s0011g02990 I
Solyc05g026180.1 Solanum lycopersicum Solyc05g026180.1 I
TCM_011869 Theobroma cacao TCM_011869 I
TCM_016984 Theobroma cacao TCM_016984 I
TCM_037747 Theobroma cacao TCM_037747 I
Thhalv10024980m.g Eutrema salsugineum Thhalv10024980m.g I
Traes_6AL_C14335DC8 Triticum aestivum Traes_6AL_C14335DC8 I
Traes_6BL_B27806C89 Triticum aestivum Traes_6BL_B27806C89 I
Traes_6DL_2F3586557 Triticum aestivum Traes_6DL_2F3586557 I
Traes_7AS_6E6A5CD04 Triticum aestivum Traes_7AS_6E6A5CD04 I
Traes_7BS_99BF8BA2F Triticum aestivum Traes_7BS_99BF8BA2F I
Traes_7DS_78B5508C0 Triticum aestivum Traes_7DS_78B5508C0 I
TRIUR3_21992 Triticum urartu TRIUR3_21992 I
VIT_11s0016g02880 Vitis vinifera VIT_11s0016g02880 I
VIT_14s0066g00360 Vitis vinifera VIT_14s0066g00360 I