Cmyd_10000491 (Chelonia mydas)
p53

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00870 (P53) IPR011615 Cmyd_10000491 T311228_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TP53
M09337_2.00 		Homo sapiens
DRRCWTGYYCAGRCATGYYY
RRRCATGYCTGRRCAWGYYH		 Misc
Kulakovskiy et al.(2013)
P53_HUMAN.H11MO.0.A 		0.719 0.719
TP53
M09621_2.00 		Homo sapiens
NNDRCAWGYHNNDRCWWGYH
DRCWWGYHNNDRCWTGYHNN		 Misc
Heinz et al.(2010)
Saos-p53 		0.719 0.719
TP53
M11197_2.00 		Homo sapiens
RGACATGCCCGGGCATGTYC
GRACATGCCCGGGCATGTCY		 Transfac
Matys et al.(2006)
V$P53_01 		0.719 0.719
TP53
M11198_2.00 		Homo sapiens
NGRCWTGYYY
RRRCAWGYCN		 Transfac
Matys et al.(2006)
V$P53_02 		0.719 0.719
TP53
M11199_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_03 		0.719 0.719
TP53
M11200_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_04 		0.719 0.719
TP53
M11201_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_05 		0.719 0.719
TP53
M11202_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_Q3_01 		0.719 0.719
TP53
M11203_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_Q3 		0.719 0.719
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10000491 p53 61 256

Links

Other p53 family TFs
Other Chelonia mydas TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_192406 Agaricus bisporus AGABI2DRAFT_192406 N 0.000
BOTBODRAFT_99602 Botryobasidium botryosum BOTBODRAFT_99602 N 0.000
CY34DRAFT_802245 Suillus luteus CY34DRAFT_802245 N 0.000
GALMADRAFT_249169 Galerina marginata GALMADRAFT_249169 N 0.000
GLOTRDRAFT_37802 Gloeophyllum trabeum GLOTRDRAFT_37802 N 0.000
HETIRDRAFT_385203 Heterobasidion irregulare HETIRDRAFT_385203 N 0.000
K443DRAFT_671237 Laccaria amethystina K443DRAFT_671237 N 0.000
LACBIDRAFT_313784 Laccaria bicolor LACBIDRAFT_313784 N 0.000
M378DRAFT_161598 Amanita muscaria M378DRAFT_161598 N 0.000
M413DRAFT_441925 Hebeloma cylindrosporum M413DRAFT_441925 N 0.000
Moror_6792 Moniliophthora roreri Moror_6792 N 0.000
PAXRUDRAFT_27074 Paxillus rubicundulus PAXRUDRAFT_27074 N 0.000
PHACADRAFT_258400 Phanerochaete carnosa PHACADRAFT_258400 N 0.000
PHLGIDRAFT_93775 Phlebiopsis gigantea PHLGIDRAFT_93775 N 0.000
PIIN_00052 Piriformospora indica PIIN_00052 N 0.000
PILCRDRAFT_809917 Piloderma croceum PILCRDRAFT_809917 N 0.000
PLEOSDRAFT_1056240 Pleurotus ostreatus PLEOSDRAFT_1056240 N 0.000
SCHCODRAFT_110354 Schizophyllum commune SCHCODRAFT_110354 N 0.000
SERLA73DRAFT_179810 Serpula lacrymans SERLA73DRAFT_179810 N 0.000
V565_004660 Rhizoctonia solani V565_004660 N 0.000