ENSORLG00000007805 (Oryzias latipes)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 ENSORLG00000007805 T313597_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSORLG00000007805
M02435_2.00		 Oryzias latipes
SCNAAWNNNN
NNNNWTTNGS		 PBM
Weirauch et al.(2014)
pTH9277		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSGACG00000007469
M02432_2.00 		Gasterosteus aculeatus
NVNMGAWACH
DGTWTCKNBN		 PBM
Weirauch et al.(2014)
pTH9179 		0.884 0.884
lcorl
M02438_2.00 		Xenopus tropicalis
NYCNAAWHN
NDWTTNGRN		 PBM
Weirauch et al.(2014)
pTH8558 		0.884 0.884
ENSACAG00000012432
M02430_2.00 		Anolis carolinensis
NNNCNAAWNN
NNWTTNGNNN		 PBM
Weirauch et al.(2014)
pTH9220 		0.860 0.860
ENSMGAG00000009953
M02433_2.00 		Meleagris gallopavo
NNNYNAAWNN
NNWTTNRNNN		 PBM
Weirauch et al.(2014)
pTH8649 		0.860 0.860
ENSORLG00000000044
M02434_2.00 		Oryzias latipes
CCCAAAWT
AWTTTGGG		 PBM
Weirauch et al.(2014)
pTH9275 		0.837 0.837
LCORL
M02431_2.00 		Choloepus hoffmanni
NNYNAAHNN
NNDTTNRNN		 PBM
Weirauch et al.(2014)
pTH9253 		0.791 0.791
For this family, TFs with SR scores > 0.778 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02435_2.00 Pipsqueak 51 94

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000009781 Pipsqueak 488 531

Links

Other Pipsqueak family TFs
Other Oryzias latipes TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R012556 Calypte anna Aan_R012556 I 0.822
Afo_R002709 Aptenodytes forsteri Afo_R002709 I 0.822
Alligator_sinensis_CCG020164.1 Alligator sinensis Alligator_sinensis_CCG020164.1 I 0.822
Brh_R001506 Buceros rhinoceros Brh_R001506 I 0.822
Cmyd_10003742 Chelonia mydas Cmyd_10003742 I 0.822
ENSACAG00000012432 Anolis carolinensis ENSACAG00000012432 D 0.860
ENSAMEG00000000186 Ailuropoda melanoleuca ENSAMEG00000000186 I 0.822
ENSAMXG00000021599 Astyanax mexicanus ENSAMXG00000021599 I 0.822
ENSAPLG00000003032 Anas platyrhynchos ENSAPLG00000003032 I 0.822
ENSBTAG00000004029 Bos taurus ENSBTAG00000004029 I 0.822
ENSBTAP00000005261-D1 Bos grunniens ENSBTAP00000005261-D1 I 0.822
ENSCAFG00000008905 Canis familiaris ENSCAFG00000008905 I 0.822
ENSCHOG00000001981 Choloepus hoffmanni ENSCHOG00000001981 I 0.822
ENSCJAG00000016484 Callithrix jacchus ENSCJAG00000016484 I 0.822
ENSCPOG00000005739 Cavia porcellus ENSCPOG00000005739 I 0.822
ENSCSAG00000006043 Chlorocebus sabaeus ENSCSAG00000006043 I 0.822
ENSECAG00000013517 Equus caballus ENSECAG00000013517 I 0.822
ENSFALG00000008484 Ficedula albicollis ENSFALG00000008484 I 0.822
ENSFCAG00000028121 Felis catus ENSFCAG00000028121 I 0.822
ENSGACG00000007469 Gasterosteus aculeatus ENSGACG00000007469 D 0.864
ENSGALG00000023649 Gallus gallus ENSGALG00000023649 I 0.822
ENSGGOG00000026110 Gorilla gorilla ENSGGOG00000026110 I 0.822
ENSGMOG00000018278 Gadus morhua ENSGMOG00000018278 I 0.932
ENSLACG00000001265 Latimeria chalumnae ENSLACG00000001265 I 0.822
ENSLAFG00000014271 Loxodonta africana ENSLAFG00000014271 I 0.822
ENSLOCG00000012823 Lepisosteus oculatus ENSLOCG00000012823 I 0.800
ENSMGAG00000009953 Meleagris gallopavo ENSMGAG00000009953 D 0.822
ENSMICG00000007572 Microcebus murinus ENSMICG00000007572 I 0.822
ENSMLUG00000000494 Myotis lucifugus ENSMLUG00000000494 I 0.822
ENSMMUG00000010425 Macaca mulatta ENSMMUG00000010425 I 0.822
ENSMODG00000004531 Monodelphis domestica ENSMODG00000004531 I 0.822
ENSNLEG00000013648 Nomascus leucogenys ENSNLEG00000013648 I 0.822
ENSOARG00000008725 Ovis aries ENSOARG00000008725 I 0.822
ENSOGAG00000008137 Otolemur garnettii ENSOGAG00000008137 I 0.822
ENSONIG00000000255 Oreochromis niloticus ENSONIG00000000255 I 0.800
ENSONIG00000018331 Oreochromis niloticus ENSONIG00000018331 I 0.907
ENSOPRG00000014745 Ochotona princeps ENSOPRG00000014745 I 0.822
ENSORLG00000000044 Oryzias latipes ENSORLG00000000044 D 0.800
ENSP00000360138 Macaca fascicularis ENSP00000360138 I 0.822
ENSPCAG00000007084 Procavia capensis ENSPCAG00000007084 I 0.822
ENSPFOG00000009902 Poecilia formosa ENSPFOG00000009902 I 0.800
ENSPFOG00000013017 Poecilia formosa ENSPFOG00000013017 I 0.932
ENSPMAG00000003112 Petromyzon marinus ENSPMAG00000003112 I 0.000
ENSPSIG00000009179 Pelodiscus sinensis ENSPSIG00000009179 I 0.822
ENSPVAG00000003364 Pteropus vampyrus ENSPVAG00000003364 I 0.822
ENSSARG00000008230 Sorex araneus ENSSARG00000008230 I 0.822
ENSSHAG00000018667 Sarcophilus harrisii ENSSHAG00000018667 I 0.822
ENSSSCG00000010511 Sus scrofa ENSSSCG00000010511 I 0.822
ENSSTOG00000010808 Ictidomys tridecemlineatus ENSSTOG00000010808 I 0.822
ENSTBEG00000005837 Tupaia belangeri ENSTBEG00000005837 I 0.822
ENSTGUG00000009834 Taeniopygia guttata ENSTGUG00000009834 I 0.822
ENSTRUG00000008704 Takifugu rubripes ENSTRUG00000008704 I 0.864
ENSTTRG00000009856 Tursiops truncatus ENSTTRG00000009856 I 0.822
ENSVPAG00000007583 Vicugna pacos ENSVPAG00000007583 I 0.822
ENSXMAG00000002515 Xiphophorus maculatus ENSXMAG00000002515 I 0.932
ENSXMAG00000005637 Xiphophorus maculatus ENSXMAG00000005637 I 0.800
Gfo_R002325 Geospiza fortis Gfo_R002325 I 0.822
lcor Tetraodon nigroviridis ENSTNIG00000003614 I 0.800
LCOR Pan troglodytes ENSPTRG00000002800 I 0.822
lcor Danio rerio ENSDARG00000100908 I 0.800
LCOR Homo sapiens ENSG00000196233 I 0.822
Lcor Mus musculus ENSMUSG00000025019 I 0.822
Lcor Rattus norvegicus ENSRNOG00000042679 I 0.822
lcor Takifugu rubripes ENSTRUG00000006194 I 0.800
LCORL Homo sapiens ENSG00000178177 D 0.000
LCORL Choloepus hoffmanni ENSCHOG00000006922 D 0.000
LCORL Tupaia belangeri ENSTBEG00000012926 I 0.000
lcorl Xenopus tropicalis XB-GENE-995017 D 0.844
Myotis_brandtii_LCORL_10024398 Myotis brandtii Myotis_brandtii_LCORL_10024398 I 0.000
Myotis_brandtii_LCOR_10025723 Myotis brandtii Myotis_brandtii_LCOR_10025723 I 0.822
Ogr16502 Ophisaurus gracilis Ogr16502 I 0.822
Pvit_17823 Pogona vitticeps Pvit_17823 I 0.822
Tal_R010723 Tyto alba Tal_R010723 I 0.822