GE10258 (Drosophila yakuba)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 FBgn0228131 T313734_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Eip93F
M06443_2.00 		Drosophila melanogaster
VCHSCCRAAAWT
AWTTTYGGSDGB		 B1H
Zhu et al.(2011)
Eip93F_SANGER_10_FBgn0013948 		1.000 1.000
nasonia_NCBI_hmm1312624
M02436_2.00 		Nasonia vitripennis
NNNYNAAWNN
NNWTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9266 		0.978 0.978
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0255268 Pipsqueak 774 819

Links

Other Pipsqueak family TFs
Other Drosophila yakuba TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALNC14_027910 Albugo laibachii ALNC14_027910 N
ALNC14_034240 Albugo laibachii ALNC14_034240 N
F443_02274 Phytophthora parasitica F443_02274 N
F443_04862 Phytophthora parasitica F443_04862 N
fgenesh1_kg.C_scaffold_16000608 Phytophthora capsici fgenesh1_kg.C_scaffold_16000608 N
fgenesh_scip_prom.28083.569 Phytophthora lateralis fgenesh_scip_prom.28083.569 N
fgenesh_scip_prom.28083.6196 Phytophthora lateralis fgenesh_scip_prom.28083.6196 N
fgenesh_scip_prom.46568.1731 Phytophthora kernoviae fgenesh_scip_prom.46568.1731 N
fgenesh_scip_prom.46568.1733 Phytophthora kernoviae fgenesh_scip_prom.46568.1733 N
HpaG809256 Hyaloperonospora arabidopsidis HpaG809256 N
HpaG813524 Hyaloperonospora arabidopsidis HpaG813524 N
HpaG813610 Hyaloperonospora arabidopsidis HpaG813610 N
maker-pag1_scaffold_576-fgenesh-gene-0.2 Pythium aphanidermatum maker-pag1_scaffold_576-fgenesh-gene-0.2 N
maker-pag1_scaffold_576-fgenesh-gene-0.4 Pythium aphanidermatum maker-pag1_scaffold_576-fgenesh-gene-0.4 N
maker-par_contig_1523-snap-gene-0.2 Pythium arrhenomanes maker-par_contig_1523-snap-gene-0.2 N
maker-par_contig_3769-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_3769-fgenesh-gene-0.0 N
maker-pve_contig_241-fgenesh-gene-0.11 Pythium vexans maker-pve_contig_241-fgenesh-gene-0.11 N
maker-pve_contig_241-fgenesh-gene-0.4 Pythium vexans maker-pve_contig_241-fgenesh-gene-0.4 N
Phyra74602 Phytophthora ramorum Phyra74602 N
Phyra78530 Phytophthora ramorum Phyra78530 N
Physo128027 Phytophthora sojae Physo128027 N
Physo128029 Phytophthora sojae Physo128029 N
PITG_12584 Phytophthora infestans PITG_12584 N
PITG_12760 Phytophthora infestans PITG_12760 N
PYU1_G011634 Pythium ultimum PYU1_G011634 N
PYU1_G011639 Pythium ultimum PYU1_G011639 N
SPRG_06148 Saprolegnia parasitica SPRG_06148 N