CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_kg.C_scaffold_16000608
(
Phytophthora capsici
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
fgenesh1_kg.C_scaffold_16000608
T052098_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_kg.C_scaffold_16000608
bHLH
85
137
SREDLNLKEKKRMFKLNDRINQLKDMLDEAGVQTKKNKQSILDNASHYIEMLR
Links
Other
bHLH
family TFs
Other
Phytophthora capsici
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_02274
Phytophthora parasitica
F443_02274
N
0.914
fgenesh_scip_prom.46568.1731
Phytophthora kernoviae
fgenesh_scip_prom.46568.1731
N
0.914
Physo128029
Phytophthora sojae
Physo128029
N
0.914
PITG_12760
Phytophthora infestans
PITG_12760
N
0.914
ALNC14_034240
Albugo laibachii
ALNC14_034240
N
0.903
F443_04862
Phytophthora parasitica
F443_04862
N
0.903
fgenesh_scip_prom.28083.569
Phytophthora lateralis
fgenesh_scip_prom.28083.569
N
0.903
fgenesh_scip_prom.28083.6196
Phytophthora lateralis
fgenesh_scip_prom.28083.6196
N
0.903
fgenesh_scip_prom.46568.1733
Phytophthora kernoviae
fgenesh_scip_prom.46568.1733
N
0.903
HpaG809256
Hyaloperonospora arabidopsidis
HpaG809256
N
0.903
HpaG813610
Hyaloperonospora arabidopsidis
HpaG813610
N
0.903
maker-pag1_scaffold_576-fgenesh-gene-0.2
Pythium aphanidermatum
maker-pag1_scaffold_576-fgenesh-gene-0.2
N
0.903
maker-par_contig_3769-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_3769-fgenesh-gene-0.0
N
0.903
maker-pve_contig_241-fgenesh-gene-0.4
Pythium vexans
maker-pve_contig_241-fgenesh-gene-0.4
N
0.903
Phyra74602
Phytophthora ramorum
Phyra74602
N
0.903
Phyra78530
Phytophthora ramorum
Phyra78530
N
0.903
Physo128027
Phytophthora sojae
Physo128027
N
0.903
PITG_12584
Phytophthora infestans
PITG_12584
N
0.903
PYU1_G011634
Pythium ultimum
PYU1_G011634
N
0.903
PYU1_G011639
Pythium ultimum
PYU1_G011639
N
0.903
F443_03903
Phytophthora parasitica
F443_03903
N
0.894
ALNC14_027910
Albugo laibachii
ALNC14_027910
N
0.890
maker-pag1_scaffold_576-fgenesh-gene-0.4
Pythium aphanidermatum
maker-pag1_scaffold_576-fgenesh-gene-0.4
N
0.873
maker-par_contig_1523-snap-gene-0.2
Pythium arrhenomanes
maker-par_contig_1523-snap-gene-0.2
N
0.873
maker-pve_contig_241-fgenesh-gene-0.11
Pythium vexans
maker-pve_contig_241-fgenesh-gene-0.11
N
0.873
HpaG813524
Hyaloperonospora arabidopsidis
HpaG813524
N
0.860
SPRG_06148
Saprolegnia parasitica
SPRG_06148
N
0.849