Phyra95221 (Phytophthora ramorum)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 Phyra95221 T314005_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Phyra78816
M02437_2.00 		Phytophthora ramorum
NNYRNWACAN
NTGTWNYRNN		 PBM
Weirauch et al.(2014)
pTH7817 		1.000 1.000
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Phyra95221 Pipsqueak 307 346

Links

Other Pipsqueak family TFs
Other Phytophthora ramorum TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALNC14_039700 Albugo laibachii ALNC14_039700 N
F443_02263 Phytophthora parasitica F443_02263 N
fgenesh-pir_contig_40-abinit-gene-0.164 Pythium irregulare fgenesh-pir_contig_40-abinit-gene-0.164 N
fgenesh_scip_prom.46568.784 Phytophthora kernoviae fgenesh_scip_prom.46568.784 N
HpaG809245 Hyaloperonospora arabidopsidis HpaG809245 N
maker-pag1_scaffold_166-fgenesh-gene-0.7 Pythium aphanidermatum maker-pag1_scaffold_166-fgenesh-gene-0.7 N
maker-par_contig_347-fgenesh-gene-0.7 Pythium arrhenomanes maker-par_contig_347-fgenesh-gene-0.7 N
maker-pve_contig_963-fgenesh-gene-0.1 Pythium vexans maker-pve_contig_963-fgenesh-gene-0.1 N
Phyra74608 Phytophthora ramorum Phyra74608 N
PITG_12749 Phytophthora infestans PITG_12749 N
PYU1_G014436 Pythium ultimum PYU1_G014436 N
SPRG_05187 Saprolegnia parasitica SPRG_05187 N