PITG_00015 (Phytophthora infestans)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 PITG_00015 T314019_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Phyra78816
M02437_2.00 		Phytophthora ramorum
NNYRNWACAN
NTGTWNYRNN		 PBM
Weirauch et al.(2014)
pTH7817 		0.857 0.857
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PITG_00015T0 Pipsqueak 25 67

Links

Other Pipsqueak family TFs
Other Phytophthora infestans TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALNC14_041400 Albugo laibachii ALNC14_041400 N
fgenesh_masked-piw_contig_1000-abinit-gene-0.16 Pythium iwayamai fgenesh_masked-piw_contig_1000-abinit-gene-0.16 N
gw1.1.2224.1 Fragilariopsis cylindrus gw1.1.2224.1 N
gw1.11.315.1 Phytophthora capsici gw1.11.315.1 N
HpaG808544 Hyaloperonospora arabidopsidis HpaG808544 N
maker-pag1_scaffold_350-snap-gene-0.14 Pythium aphanidermatum maker-pag1_scaffold_350-snap-gene-0.14 N
maker-par_contig_1488-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_1488-fgenesh-gene-0.0 N
maker-pir_contig_324-snap-gene-0.12 Pythium irregulare maker-pir_contig_324-snap-gene-0.12 N
Physo156164 Phytophthora sojae Physo156164 N
PYU1_G005945 Pythium ultimum PYU1_G005945 N
SPRG_03236 Saprolegnia parasitica SPRG_03236 N