PITG_11246 (Phytophthora infestans)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 PITG_11246 T314022_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Phyra78816
M02437_2.00 		Phytophthora ramorum
NNYRNWACAN
NTGTWNYRNN		 PBM
Weirauch et al.(2014)
pTH7817 		0.900 0.900
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PITG_11246T0 Pipsqueak 275 315

Links

Other Pipsqueak family TFs
Other Phytophthora infestans TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALNC14_036360 Albugo laibachii ALNC14_036360 N
estExt_Genewise1.C_160059 Phytophthora capsici estExt_Genewise1.C_160059 N
estExt_Genewise1Plus.C_470032 Phytophthora capsici estExt_Genewise1Plus.C_470032 N
F443_05707 Phytophthora parasitica F443_05707 N
fgenesh_scip_prom.28083.10584 Phytophthora lateralis fgenesh_scip_prom.28083.10584 N
fgenesh_scip_prom.28083.905 Phytophthora lateralis fgenesh_scip_prom.28083.905 N
fgenesh_scip_prom.46568.8980 Phytophthora kernoviae fgenesh_scip_prom.46568.8980 N
HpaG801617 Hyaloperonospora arabidopsidis HpaG801617 N
maker-pag1_scaffold_1181-snap-gene-0.1 Pythium aphanidermatum maker-pag1_scaffold_1181-snap-gene-0.1 N
maker-pag1_scaffold_415-fgenesh-gene-0.5 Pythium aphanidermatum maker-pag1_scaffold_415-fgenesh-gene-0.5 N
maker-par_contig_2427-snap-gene-0.2 Pythium arrhenomanes maker-par_contig_2427-snap-gene-0.2 N
maker-pir_contig_139-fgenesh-gene-0.3 Pythium irregulare maker-pir_contig_139-fgenesh-gene-0.3 N
maker-piw_contig_2063-fgenesh-gene-0.0 Pythium iwayamai maker-piw_contig_2063-fgenesh-gene-0.0 N
maker-piw_contig_701-snap-gene-0.10 Pythium iwayamai maker-piw_contig_701-snap-gene-0.10 N
maker-pve_contig_1590-snap-gene-0.1 Pythium vexans maker-pve_contig_1590-snap-gene-0.1 N
maker-pve_contig_30-snap-gene-0.60 Pythium vexans maker-pve_contig_30-snap-gene-0.60 N
Phyra79700 Phytophthora ramorum Phyra79700 N
Phyra96342 Phytophthora ramorum Phyra96342 N
Physo127211 Phytophthora sojae Physo127211 N
Physo132833 Phytophthora sojae Physo132833 N
PITG_01056 Phytophthora infestans PITG_01056 N
PYU1_G000095 Pythium ultimum PYU1_G000095 N
PYU1_G001814 Pythium ultimum PYU1_G001814 N
SPRG_07305 Saprolegnia parasitica SPRG_07305 N
SPRG_08919 Saprolegnia parasitica SPRG_08919 N