CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cflo_11724--NP_001011602.1_APIME
(
Camponotus floridanus
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
Cflo_11724--NP_001011602.1_APIME
T314427_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cflo_11724--NP_001011602.1_APIME
Pipsqueak
142
185
TQEDMDAALDALRNHNMSLTKASATFGIPSTTLWQRAHRLGIDT
Cflo_11724--NP_001011602.1_APIME
Pipsqueak
196
238
SDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARKEGIR
Cflo_11724--NP_001011602.1_APIME
Pipsqueak
251
296
TPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSR
Cflo_11724--NP_001011602.1_APIME
Pipsqueak
303
346
SEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEE
Links
Other
Pipsqueak
family TFs
Other
Camponotus floridanus
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_192433
Agaricus bisporus
AGABI2DRAFT_192433
N
0.000
BN946_scf184983.g13
Trametes cinnabarina
BN946_scf184983.g13
I
0.000
BOTBODRAFT_56815
Botryobasidium botryosum
BOTBODRAFT_56815
N
0.000
CC1G_01991
Coprinopsis cinerea
CC1G_01991
N
0.000
CNG03450
Cryptococcus neoformans
CNG03450
D
0.000
CY34DRAFT_611334
Suillus luteus
CY34DRAFT_611334
N
0.000
CY34DRAFT_810493
Suillus luteus
CY34DRAFT_810493
N
0.000
EFA86584.1
Polysphondylium pallidum
EFA86584.1
I
0.000
EuGene3000454
Heterobasidion annosum
EuGene3000454
N
0.000
fgeneshMC_pg.10_#_259
Mucor circinelloides
fgeneshMC_pg.10_#_259
I
0.000
fgeneshPB_pg.5__518
Phycomyces blakesleeanus
fgeneshPB_pg.5__518
I
0.000
fgeneshTM_pg.2_#_419
Tremella mesenterica
fgeneshTM_pg.2_#_419
I
0.000
FIBRA_03525
Fibroporia radiculosa
FIBRA_03525
I
0.000
FOMPIDRAFT_1031831
Fomitopsis pinicola
FOMPIDRAFT_1031831
I
0.000
GALMADRAFT_540101
Galerina marginata
GALMADRAFT_540101
N
0.000
GLOINDRAFT_346743
Rhizophagus irregularis
GLOINDRAFT_346743
I
0.000
GLOTRDRAFT_127900
Gloeophyllum trabeum
GLOTRDRAFT_127900
I
0.000
GLOTRDRAFT_134845
Gloeophyllum trabeum
GLOTRDRAFT_134845
N
0.000
gw1.10.371.1
Mucor circinelloides
gw1.10.371.1
I
0.000
gw1.16.189.1
Phycomyces blakesleeanus
gw1.16.189.1
I
0.000
gw1.26.106.1
Phycomyces blakesleeanus
gw1.26.106.1
I
0.000
gw1.54.52.1
Phycomyces blakesleeanus
gw1.54.52.1
I
0.000
gw1.6.914.1
Mucor circinelloides
gw1.6.914.1
I
0.000
HETIRDRAFT_169178
Heterobasidion irregulare
HETIRDRAFT_169178
N
0.000
HETIRDRAFT_431289
Heterobasidion irregulare
HETIRDRAFT_431289
N
0.000
J056_002014
Wallemia ichthyophaga
J056_002014
N
0.000
JAAARDRAFT_44019
Jaapia argillacea
JAAARDRAFT_44019
N
0.000
K443DRAFT_105165
Laccaria amethystina
K443DRAFT_105165
I
0.000
K443DRAFT_82097
Laccaria amethystina
K443DRAFT_82097
N
0.000
L804_03528
Cryptococcus gattii
L804_03528
I
0.000
LACBIDRAFT_297628
Laccaria bicolor
LACBIDRAFT_297628
N
0.000
LACBIDRAFT_324166
Laccaria bicolor
LACBIDRAFT_324166
N
0.000
M378DRAFT_12738
Amanita muscaria
M378DRAFT_12738
N
0.000
M413DRAFT_24511
Hebeloma cylindrosporum
M413DRAFT_24511
N
0.000
Moror_6850
Moniliophthora roreri
Moror_6850
N
0.000
PAXRUDRAFT_823153
Paxillus rubicundulus
PAXRUDRAFT_823153
N
0.000
PHACADRAFT_258345
Phanerochaete carnosa
PHACADRAFT_258345
I
0.000
PHLGIDRAFT_184498
Phlebiopsis gigantea
PHLGIDRAFT_184498
I
0.000
PILCRDRAFT_101484
Piloderma croceum
PILCRDRAFT_101484
N
0.000
PISMIDRAFT_217828
Pisolithus microcarpus
PISMIDRAFT_217828
N
0.000
PLEOSDRAFT_1112690
Pleurotus ostreatus
PLEOSDRAFT_1112690
N
0.000
PV05_02773
Exophiala xenobiotica
PV05_02773
I
0.000
PV11_06012
Exophiala sideris
PV11_06012
I
0.000
RO3G_01863
Rhizopus oryzae
RO3G_01863
I
0.000
RO3G_03673
Rhizopus oryzae
RO3G_03673
I
0.000
RO3G_11070
Rhizopus oryzae
RO3G_11070
N
0.000
RO3G_14851
Rhizopus oryzae
RO3G_14851
I
0.000
RO3G_16317
Rhizopus oryzae
RO3G_16317
I
0.000
SCHCODRAFT_257652
Schizophyllum commune
SCHCODRAFT_257652
I
0.000
SPPG_03931
Spizellomyces punctatus
SPPG_03931
I
0.000
SPPG_06166
Spizellomyces punctatus
SPPG_06166
I
0.000
WALSEDRAFT_62198
Wallemia sebi
WALSEDRAFT_62198
N
0.000