LDEC016322 (Leptinotarsa decemlineata)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 LDEC016322 T314644_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BtbVII
M03951_2.00 		Drosophila melanogaster
RKDGBAYATR
YATRTVCHMY		 SELEX
Nitta et al.(2015)
BtbVII_1 		0.886 0.886
BtbVII
M03952_2.00 		Drosophila melanogaster
ATGTAYHWWWGTACAT
ATGTACWWWDRTACAT		 SELEX
Nitta et al.(2015)
BtbVII_2 		0.886 0.886
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LDEC016322-PA Pipsqueak 342 386

Links

Other Pipsqueak family TFs
Other Leptinotarsa decemlineata TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000013382 Ailuropoda melanoleuca ENSAMEG00000013382 I
ENSCSAG00000001821 Chlorocebus sabaeus ENSCSAG00000001821 I
ENSDNOG00000044407 Dasypus novemcinctus ENSDNOG00000044407 I
ENSFCAG00000002508 Felis catus ENSFCAG00000002508 I
ENSMMUP00000001941 Macaca fascicularis ENSMMUP00000001941 I
ENSPANG00000014284 Papio anubis ENSPANG00000014284 I
ZNF605 Canis familiaris ENSCAFG00000006033 I
ZNF605 Callithrix jacchus ENSCJAG00000013074 I
ZNF605 Gorilla gorilla ENSGGOG00000008782 I
ZNF605 Macaca mulatta ENSMMUG00000001457 I
ZNF605 Otolemur garnettii ENSOGAG00000006676 I
ZNF605 Pan troglodytes ENSPTRG00000005662 I
ZNF84 Myotis lucifugus ENSMLUG00000001635 I