LDEC016322 (Leptinotarsa decemlineata)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 LDEC016322 T314644_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BtbVII
M03951_2.00 		Drosophila melanogaster
RKDGBAYATR
YATRTVCHMY		 SELEX
Nitta et al.(2015)
BtbVII_1 		0.886 0.886
BtbVII
M03952_2.00 		Drosophila melanogaster
ATGTAYHWWWGTACAT
ATGTACWWWDRTACAT		 SELEX
Nitta et al.(2015)
BtbVII_2 		0.886 0.886
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LDEC016322-PA Pipsqueak 342 386

Links

Other Pipsqueak family TFs
Other Leptinotarsa decemlineata TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TC003616 Tribolium castaneum TC003616 I 0.955
CpipJ_CPIJ017153 Culex pipiens CpipJ_CPIJ017153 I 0.911
AAEL018698 Aedes aegypti AAEL018698 I 0.911
ADAC006420 Anopheles darlingi ADAC006420 I 0.911
AGAP006454 Anopheles gambiae AGAP006454 I 0.911
CPIJ017153 Culex quinquefasciatus CPIJ017153 I 0.911
AALB005186 Anopheles albimanus AALB005186 I 0.911
AARA008334 Anopheles arabiensis AARA008334 I 0.911
ACHR007740 Anopheles christyi ACHR007740 I 0.911
ACOM039703 Anopheles coluzzii ACOM039703 I 0.911
ACUA010345 Anopheles culicifacies ACUA010345 I 0.911
ADIR007663 Anopheles dirus ADIR007663 I 0.911
AEPI004190 Anopheles epiroticus AEPI004190 I 0.911
AFAF003644 Anopheles farauti AFAF003644 I 0.911
AFUN007515 Anopheles funestus AFUN007515 I 0.911
AMAM003145 Anopheles maculatus AMAM003145 I 0.911
AMEC002799 Anopheles melas AMEC002799 I 0.911
AMEC010538 Anopheles melas AMEC010538 I 0.911
AMEM018130 Anopheles merus AMEM018130 I 0.911
AMIN007912 Anopheles minimus AMIN007912 I 0.911
AQUA006290 Anopheles quadriannulatus AQUA006290 I 0.911
ASIS021207 Anopheles sinensis ASIS021207 I 0.911
ASTEI10142 Anopheles stephensi ASTEI10142 I 0.911
GA11032 Drosophila pseudoobscura FBgn0071088 I 0.886
GF24270 Drosophila ananassae FBgn0101264 I 0.886
GG14906 Drosophila erecta FBgn0107160 I 0.886
GH15390 Drosophila grimshawi FBgn0122862 I 0.886
GI12995 Drosophila mojavensis FBgn0135752 I 0.886
GM14532 Drosophila sechellia FBgn0169454 I 0.886
GD13728 Drosophila simulans FBgn0185434 I 0.886
GJ13138 Drosophila virilis FBgn0200365 I 0.886
GK17760 Drosophila willistoni FBgn0219759 I 0.886
GE20360 Drosophila yakuba FBgn0237676 I 0.886
BtbVII Drosophila melanogaster FBgn0263108 D 0.886
L798_02803 Zootermopsis nevadensis L798_02803 I 0.867
YQE_09847 Dendroctonus ponderosae YQE_09847 I 0.867
Hsal_05361--XP_001120712.1_APIME Harpegnathos saltator Hsal_05361--XP_001120712.1_APIME I 0.867
LCUP015770 Lucilia cuprina LCUP015770 I 0.867
ACEP18340 Atta cephalotes ACEP18340 I 0.844
BGIBMGA002027 Bombyx mori BGIBMGA002027 I 0.844
GB51518 Apis mellifera GB51518 I 0.844
Cflo_07901--XP_001120712.1_APIME Camponotus floridanus Cflo_07901--XP_001120712.1_APIME I 0.844
LLOJ001999 Lutzomyia longipalpis LLOJ001999 I 0.844
PPAI000559 Phlebotomus papatasi PPAI000559 I 0.844
KGM_18595 Danaus plexippus KGM_18595 N 0.800
RPRC005780 Rhodnius prolixus RPRC005780 I 0.800