CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BTMF_0000266401
(
Brugia timori
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
BTMF_0000266401
T315006_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Minc10479
M02439_2.00
Meloidogyne incognita
NCCSAAWTTN
NAAWTTSGGN
PBM
Weirauch et al.(2014)
pTH9213
0.795
0.795
For this family, TFs with SR scores >
0.778
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BTMF_0000266401-mRNA-1
Pipsqueak
110
154
KKDALDEAVRSVRRGEMSVHRAGSFYGVPHSTLEYKVKERNLTRT
Links
Other
Pipsqueak
family TFs
Other
Brugia timori
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AALB009907
Anopheles albimanus
AALB009907
N
AARA003272
Anopheles arabiensis
AARA003272
N
ADIR000013
Anopheles dirus
ADIR000013
N
AFUN003211
Anopheles funestus
AFUN003211
N
AQUA003112
Anopheles quadriannulatus
AQUA003112
N
ASTEI10629
Anopheles stephensi
ASTEI10629
N