genemark-nMf.1.1.scaf00700-processed-gene-0.2 (Meloidogyne floridensis)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 genemark-nMf.1.1.scaf00700-processed-gene-0.2 T315039_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
genemark-nMf.1.1.scaf00700-processed-gene-0.2-mRNA-1 Pipsqueak 404 446
genemark-nMf.1.1.scaf00700-processed-gene-0.2-mRNA-1 Pipsqueak 636 679

Links

Other Pipsqueak family TFs
Other Meloidogyne floridensis TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARB_04972 Arthroderma benhamiae ARB_04972 N
CIMG_01069 Coccidioides immitis CIMG_01069 N
CPC735_052920 Coccidioides posadasii CPC735_052920 N
H101_00145 Trichophyton interdigitale H101_00145 N
H102_05631 Trichophyton rubrum H102_05631 N
H105_05671 Trichophyton soudanense H105_05671 N
HCBG_00932 Histoplasma capsulatum HCBG_00932 N
MCYG_04527 Microsporum canis MCYG_04527 N
MCYG_04527 Arthroderma otae MCYG_04527 N
MGYG_02110 Microsporum gypseum MGYG_02110 N
PAAG_11207 Paracoccidioides sp lutzii PAAG_11207 N
PABG_01676 Paracoccidioides brasiliensis PABG_01676 N
PMAA_029710 Talaromyces marneffei PMAA_029710 N
PMAA_029710 Penicillium marneffei PMAA_029710 N
PV09_05917 Verruconis gallopava PV09_05917 N
PVAR5_2222 Byssochlamys spectabilis PVAR5_2222 N
TEQG_02005 Trichophyton equinum TEQG_02005 N
TRV_06300 Trichophyton verrucosum TRV_06300 N
TSTA_068680 Talaromyces stipitatus TSTA_068680 N
UREG_01015 Uncinocarpus reesii UREG_01015 N