CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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prox2
(
Takifugu rubripes
)
Prospero
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05044 (HPD)
IPR007738
ENSTRUG00000018353
T316566_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PROX1
M03445_2.00
Homo sapiens
BAAGRCGTCTTV
BAAGACGYCTTV
SELEX
Jolma et al.(2013)
PROX1_1
0.779
0.779
PROX1
M05691_2.00
Homo sapiens
BAMGRCGTCDTV
BAHGACGYCKTV
SELEX
Yin et al.(2017)
PROX1_eDBD_HT-SELEX
0.779
0.779
PROX1
M05692_2.00
Homo sapiens
BAAGRYGTCTTV
BAAGACRYCTTV
SELEX
Yin et al.(2017)
PROX1_eDBD_Methyl-HT-SELEX
0.779
0.779
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000046962
Prospero
407
560
GLTPSHLKKAKLMFFYTRYPSSNVLKTYFPDVKFNRCITSQLIKWFSNFREFYYIQMEKFARQAIADGVSDVKDITVSRDSELFRALNMHYNKANDFHVPDRFLEVAEITLHEFYNAIADTKDSDPSWKKAIYKVICKLDSDVPEEFKTSSYFV
ENSTRUP00000046963
Prospero
527
679
GLTPSHLKKAKLMFFYTRYPSSNVLKTYFPDVKFNRCITSQLIKWFSNFREFYYIQMEKFARQAIADGVSDVKDITVSRDSELFRALNMHYNKANDFHVPDRFLEVAEITLHEFYNAIADTKDSDPSWKKAIYKVICKLDSDVPEEFKTSSYL
Links
Other
Prospero
family TFs
Other
Takifugu rubripes
TFs
164 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R008287
Calypte anna
Aan_R008287
I
0.000
Afo_R009044
Aptenodytes forsteri
Afo_R009044
I
0.000
Brh_R010628
Buceros rhinoceros
Brh_R010628
I
0.000
ENSAMEG00000007074
Ailuropoda melanoleuca
ENSAMEG00000007074
I
0.000
ENSAPLG00000003934
Anas platyrhynchos
ENSAPLG00000003934
I
0.000
ENSFALG00000007450
Ficedula albicollis
ENSFALG00000007450
I
0.000
ENSLACG00000016839
Latimeria chalumnae
ENSLACG00000016839
I
0.000
ENSMEUG00000016293
Macropus eugenii
ENSMEUG00000016293
I
0.000
ENSNLEG00000004385
Nomascus leucogenys
ENSNLEG00000004385
I
0.000
ENSP00000266269
Macaca fascicularis
ENSP00000266269
I
0.000
ENSP00000266269-D1
Bos grunniens
ENSP00000266269-D1
I
0.000
ENSPPYG00000011732
Pongo abelii
ENSPPYG00000011732
I
0.000
ENSPSIG00000011562
Pelodiscus sinensis
ENSPSIG00000011562
I
0.000
ENSPSIG00000016553
Pelodiscus sinensis
ENSPSIG00000016553
I
0.000
ENSSTOG00000020707
Ictidomys tridecemlineatus
ENSSTOG00000020707
I
0.000
Gfo_R010882
Geospiza fortis
Gfo_R010882
I
0.000
Myotis_brandtii_PATZ1_10027570
Myotis brandtii
Myotis_brandtii_PATZ1_10027570
I
0.000
PATZ1
Gallus gallus
ENSGALG00000006934
I
0.000
PATZ1
Bos taurus
ENSBTAG00000005478
I
0.000
PATZ1
Canis familiaris
ENSCAFG00000013087
I
0.000
PATZ1
Cavia porcellus
ENSCPOG00000010787
I
0.000
PATZ1
Tursiops truncatus
ENSTTRG00000010279
I
0.000
PATZ1
Pteropus vampyrus
ENSPVAG00000001749
I
0.000
PATZ1
Pan troglodytes
ENSPTRG00000014268
I
0.000
PATZ1
Otolemur garnettii
ENSOGAG00000027905
I
0.000
PATZ1
Dasypus novemcinctus
ENSDNOG00000003183
I
0.000
Patz1
Mus musculus
ENSMUSG00000020453
I
0.000
PATZ1
Macaca mulatta
ENSMMUG00000013911
I
0.000
PATZ1
Myotis lucifugus
ENSMLUG00000009942
I
0.000
PATZ1
Microcebus murinus
ENSMICG00000005430
I
0.000
PATZ1
Meleagris gallopavo
ENSMGAG00000008439
I
0.000
PATZ1
Homo sapiens
ENSG00000100105
D
0.000
PATZ1
Loxodonta africana
ENSLAFG00000002317
I
0.000
PATZ1
Gorilla gorilla
ENSGGOG00000017171
I
0.000
Pvit_03702
Pogona vitticeps
Pvit_03702
I
0.000
Tal_R008892
Tyto alba
Tal_R008892
I
0.000