NFKB2 (Callithrix jacchus)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00554 (RHD_DNA_bind) IPR011539 ENSCJAG00000017928 T317074_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Nfkb2
M09356_2.00 		Mus musculus
GGGRHTTYCCC
GGGRAADYCCC		 Misc
Kulakovskiy et al.(2013)
NFKB2_MOUSE.H11MO.0.C 		1.000 1.000
NFKB2
M03446_2.00 		Homo sapiens
NGGGGAWTCCCCB
VGGGGAWTCCCCN		 SELEX
Jolma et al.(2013)
NFKB2_1 		0.976 0.976
NFKB2
M05699_2.00 		Homo sapiens
HGGKRNWTCCCCN
NGGGGAWNYMCCD		 SELEX
Yin et al.(2017)
NFKB2_eDBD_HT-SELEX 		0.976 0.976
NFKB2
M09344_2.00 		Homo sapiens
GGGRHTTYCCC
GGGRAADYCCC		 Misc
Kulakovskiy et al.(2013)
NFKB2_HUMAN.H11MO.0.B 		0.976 0.976
NFKB2
M05700_2.00 		Homo sapiens
HGGKRNWTYCCCN
NGGGRAWNYMCCD		 SELEX
Yin et al.(2017)
NFKB2_eDBD_Methyl-HT-SELEX 		0.976 0.976
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000020309 Rel 40 220
ENSCJAP00000033111 Rel 40 220
ENSCJAP00000033112 Rel 40 220

Links

Other Rel family TFs
Other Callithrix jacchus TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TMUE_s0003002800 Trichuris muris TMUE_s0003002800 N
TMUE_s0009006100 Trichuris muris TMUE_s0009006100 N
TMUE_s0062000400 Trichuris muris TMUE_s0062000400 N
TMUE_s0066004800 Trichuris muris TMUE_s0066004800 N
TMUE_s0161000100 Trichuris muris TMUE_s0161000100 N
TMUE_s0321000200 Trichuris muris TMUE_s0321000200 N
TMUE_s0332000200 Trichuris muris TMUE_s0332000200 N