CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSETEG00000002607
(
Echinops telfairi
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
ENSETEG00000002607
T317142_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
REL
M02710_2.00
Homo sapiens
BGGRNWTTCC
GGAAWNYCCV
SELEX
Mathelier et al.(2014)
MA0101.1
0.952
0.952
REL
M09350_2.00
Homo sapiens
TGKVMTTYCCCHDBH
DVHDGGGRAAKBMCA
Misc
Kulakovskiy et al.(2013)
REL_HUMAN.H11MO.0.B
0.952
0.952
REL
M11235_2.00
Homo sapiens
BGGRNWTTCC
GGAAWNYCCV
Transfac
Matys et al.(2006)
V$CREL_01
0.952
0.952
REL
M11236_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREL_Q6
0.952
0.952
Rel
M09353_2.00
Mus musculus
TGKVMTTYCCCHDBH
DVHDGGGRAAKBMCA
Misc
Kulakovskiy et al.(2013)
REL_MOUSE.H11MO.0.A
0.922
0.922
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSETEP00000002126
Rel
10
176
IEIIEQPQRMRFRYKCEGRSAGSIPGEHSTDNNRTYPSIQIMNYYGKGKVRITLITKNDPYKPHPHDLVGKDCRDGYYEAEFGQERRPLFFQNLGIRCVKKKEVKEAVISRRRAGINPFNVPEQQLLDIEDCDLNVVRLCFQVFLPDEHGNLTTALAPVVSNPIYDN
Links
Other
Rel
family TFs
Other
Echinops telfairi
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.13158s0062
Boechera stricta
Bostr.13158s0062
N
Bra014479
Brassica rapa
Bra014479
N
Cagra.6011s0009
Capsella grandiflora
Cagra.6011s0009
N
Carubv10016840m.g
Capsella rubella
Carubv10016840m.g
N
HAM2
Arabidopsis lyrata
fgenesh2_kg.5__2529__AT3G60630.1
N
SCL22
Arabidopsis thaliana
AT3G60630
N
Thhalv10006506m.g
Eutrema salsugineum
Thhalv10006506m.g
N