CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nfkb2
(
Gasterosteus aculeatus
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
ENSGACG00000001323
T317176_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000001727
Rel
1
174
SQRGFRFRYECEGPSHGGLPGASSEKNRRTYPTVKINNYVGHARVEVQLVSHTDPPSVHAHSLVGRHCTENGTCTLDIGPNDLAASFSNLGILHVTKKGVVEVLSRRLRDERKRLKGPHCHLTEENGLLKEAKELGKVMDLNIVRLKFTAYLQDSNGGFTRGLKPVVSNPIYDS
ENSGACP00000001732
Rel
12
207
IQIIEEPKQRGFRFRYECEGPSHGGLPGASSEKNRRTYPTVKINNYVGHARVEVQLVSHTDPPSVHAHSLVGRHCTENGTCTLDIGPNDLAASFSNLGILHVTKKGVVEVLSRRLRDERKRLKGPHCHLTGTHTSQASHNTLPHSEENGLLKEAKELGKVMDLNIVRLKFTAYLQDSNGGFTRGLKPVVSNPIYDS
Links
Other
Rel
family TFs
Other
Gasterosteus aculeatus
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000021294
Astyanax mexicanus
ENSAMXG00000021294
N
0.773
ENSLOCG00000012413
Lepisosteus oculatus
ENSLOCG00000012413
N
0.751
ENSOANG00000028755
Ornithorhynchus anatinus
ENSOANG00000028755
I
0.745
ENSONIG00000007023
Oreochromis niloticus
ENSONIG00000007023
N
0.870
ENSPFOG00000012589
Poecilia formosa
ENSPFOG00000012589
N
0.905
ENSXMAG00000000193
Xiphophorus maculatus
ENSXMAG00000000193
N
0.905
NFKB1
Sus scrofa
ENSSSCG00000030957
I
0.810
nfkb2
Danio rerio
ENSDARG00000038687
N
0.817
NFKB2
Homo sapiens
ENSG00000077150
D
0.828
nfkb2
Oryzias latipes
ENSORLG00000002942
N
0.876
nfkb2
Tetraodon nigroviridis
ENSTNIG00000013359
N
0.917
nfkb2
Takifugu rubripes
ENSTRUG00000004360
N
0.882