CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NFKB2
(
Gallus gallus
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
ENSGALG00000005653
T317189_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Nfkb2
M09356_2.00
Mus musculus
GGGRHTTYCCC
GGGRAADYCCC
Misc
Kulakovskiy et al.(2013)
NFKB2_MOUSE.H11MO.0.C
0.811
0.811
NFKB2
M03446_2.00
Homo sapiens
NGGGGAWTCCCCB
VGGGGAWTCCCCN
SELEX
Jolma et al.(2013)
NFKB2_1
0.799
0.799
NFKB2
M05699_2.00
Homo sapiens
HGGKRNWTCCCCN
NGGGGAWNYMCCD
SELEX
Yin et al.(2017)
NFKB2_eDBD_HT-SELEX
0.799
0.799
NFKB2
M09344_2.00
Homo sapiens
GGGRHTTYCCC
GGGRAADYCCC
Misc
Kulakovskiy et al.(2013)
NFKB2_HUMAN.H11MO.0.B
0.799
0.799
NFKB2
M05700_2.00
Homo sapiens
HGGKRNWTYCCCN
NGGGRAWNYMCCD
SELEX
Yin et al.(2017)
NFKB2_eDBD_Methyl-HT-SELEX
0.799
0.799
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGALP00000009054
Rel
32
212
LVIIEQPKQRGFRFRYGCEGPSHGGLPGASSEKGHKTYPTVKICNYEGMARIEVDLVTHSDPPRVHAHSLVGKQCNEAGNCVAIVGPKDMTAQFSNLGVLHVTKKNMMEIMKEKLKKQKTRNTNGLLTEAELREIELEAKELKKVMDLSIVRLRFTAYLRDSSGNFTLALQPVISDPIHDS
ENSGALP00000042025
Rel
32
212
LVIIEQPKQRGFRFRYGCEGPSHGGLPGASSEKGHKTYPTVKICNYEGMARIEVDLVTHSDPPRVHAHSLVGKQCNEAGNCVAIVGPKDMTAQFSNLGVLHVTKKNMMEIMKEKLKKQKTRNTNGLLTEAELREIELEAKELKKVMDLSIVRLRFTAYLRDSSGNFTLALQPVISDPIHDS
Links
Other
Rel
family TFs
Other
Gallus gallus
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL012662
Aedes aegypti
AAEL012662
I
AALB000262
Anopheles albimanus
AALB000262
I
AARA009464
Anopheles arabiensis
AARA009464
I
AATE002862
Anopheles atroparvus
AATE002862
I
ACHR010105
Anopheles christyi
ACHR010105
I
ACOM040689
Anopheles coluzzii
ACOM040689
I
ACUA018540
Anopheles culicifacies
ACUA018540
I
ACYPI000273
Acyrthosiphon pisum
ACYPI000273
I
AEPI003166
Anopheles epiroticus
AEPI003166
I
AFAF012456
Anopheles farauti
AFAF012456
I
AFUN009249
Anopheles funestus
AFUN009249
I
AGAP028176
Anopheles gambiae
AGAP028176
I
AMEC020491
Anopheles melas
AMEC020491
I
AMEM000284
Anopheles merus
AMEM000284
I
AMIN001682
Anopheles minimus
AMIN001682
I
AQUA011502
Anopheles quadriannulatus
AQUA011502
I
ASIS012186
Anopheles sinensis
ASIS012186
I
ASTEI01901
Anopheles stephensi
ASTEI01901
I
BGIBMGA007303
Bombyx mori
BGIBMGA007303
I
BGLB006797
Biomphalaria glabrata
BGLB006797
I
CapteG206308
Capitella teleta
CapteG206308
I
Cflo_05077--XP_624468.1_APIME
Camponotus floridanus
Cflo_05077--XP_624468.1_APIME
I
Cflo_09823--XP_001121050.1_APIME
Camponotus floridanus
Cflo_09823--XP_001121050.1_APIME
I
CGI_10020332
Crassostrea gigas
CGI_10020332
I
CLEC008492
Cimex lectularius
CLEC008492
I
CLEC012303
Cimex lectularius
CLEC012303
I
CPIJ010025
Culex quinquefasciatus
CPIJ010025
I
CpipJ_CPIJ010025
Culex pipiens
CpipJ_CPIJ010025
I
dimm
Drosophila melanogaster
FBgn0023091
D
estExt_fgenesh2_pg.C_2400032
Branchiostoma floridae
estExt_fgenesh2_pg.C_2400032
I
GA21247
Drosophila pseudoobscura
FBgn0081235
I
GB44356
Apis mellifera
GB44356
I
GB47718
Apis mellifera
GB47718
I
GD24318
Drosophila simulans
FBgn0195665
I
GE12913
Drosophila yakuba
FBgn0230628
I
GF14327
Drosophila ananassae
FBgn0091354
I
GG21298
Drosophila erecta
FBgn0113477
I
GH13314
Drosophila grimshawi
FBgn0120790
I
GI12220
Drosophila mojavensis
FBgn0134977
I
GJ17849
Drosophila virilis
FBgn0205017
I
GK18738
Drosophila willistoni
FBgn0220736
I
GL26661
Drosophila persimilis
FBgn0164242
I
HHAL006119-PA
Halyomorpha halys
HHAL006119-PA
I
HMEL004962
Heliconius melpomene
HMEL004962
I
Hsal_02552--XP_001121050.1_APIME
Harpegnathos saltator
Hsal_02552--XP_001121050.1_APIME
I
Hsal_06132--XP_001121050.1_APIME
Harpegnathos saltator
Hsal_06132--XP_001121050.1_APIME
I
KGM_17543
Danaus plexippus
KGM_17543
I
L798_11629
Zootermopsis nevadensis
L798_11629
I
L798_12706
Zootermopsis nevadensis
L798_12706
I
LCUP013558
Lucilia cuprina
LCUP013558
I
LDEC018804
Leptinotarsa decemlineata
LDEC018804
I
LotgiG98055
Lottia gigantea
LotgiG98055
I
MCINX009496
Melitaea cinxia
MCINX009496
I
MDOA007359
Musca domestica
MDOA007359
I
MESCA005415
Megaselia scalaris
MESCA005415
I
NV10548
Nasonia vitripennis
NV10548
I
NV21702
Nasonia vitripennis
NV21702
I
Ocbimv22004730m.g
Octopus bimaculoides
Ocbimv22004730m.g
I
PHUM567140
Pediculus humanus
PHUM567140
I
RPRC000986
Rhodnius prolixus
RPRC000986
I
Sakowv30016776m.g
Saccoglossus kowalevskii
Sakowv30016776m.g
I
SINV24225
Solenopsis invicta
SINV24225
I
SMAR011224
Strigamia maritima
SMAR011224
I
TC006222
Tribolium castaneum
TC006222
I
tetur09g04370
Tetranychus urticae
tetur09g04370
I
YQE_07035
Dendroctonus ponderosae
YQE_07035
I