Ogr16826 (Ophisaurus gracilis)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 Ogr16826 T317810_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSGALG00000000671
M02442_2.00 		Gallus gallus
NWTTTCCAYN
NRTGGAAAWN		 PBM
Weirauch et al.(2014)
pTH9263 		0.972 0.972
NFAT5
M03447_2.00 		Homo sapiens
NDGTAMWTTTCCAY
RTGGAAAWKTACHN		 SELEX
Jolma et al.(2013)
NFAT5_1 		0.972 0.972
NFAT5
M05709_2.00 		Homo sapiens
NGTANNWTTCCRY
RYGGAAWNNTACN		 SELEX
Yin et al.(2017)
NFAT5_eDBD_HT-SELEX 		0.972 0.972
NFAT5
M11224_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT5_Q5_01 		0.972 0.972
NFAT5
M11225_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT5_Q5_02 		0.972 0.972
NFAT5
M11226_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT5_Q5_03 		0.972 0.972
NFAT5
M05710_2.00 		Homo sapiens
NGTRNNTTTCCRY
RYGGAAANNYACN		 SELEX
Yin et al.(2017)
NFAT5_eDBD_Methyl-HT-SELEX 		0.972 0.972
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr16826 Rel 284 441

Links

Other Rel family TFs
Other Ophisaurus gracilis TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000427301 Angiostrongylus cantonensis ACAC_0000427301 I
ALUE_0001098001 Ascaris lumbricoides ALUE_0001098001 I
ANCCAN_15122 Ancylostoma caninum ANCCAN_15122 I
ANCCEY_00087 Ancylostoma ceylanicum ANCCEY_00087 I
ASU_06106 Ascaris suum ASU_06106 I
B0310.2 Caenorhabditis elegans WBGene00015138 D
Bm10487 Brugia malayi Bm10487 I
BTMF_0001757301 Brugia timori BTMF_0001757301 I
BXY_1612500 Bursaphelenchus xylophilus BXY_1612500 I
CBG08158 Caenorhabditis briggsae CBG08158 I
CBN30348 Caenorhabditis brenneri CBN30348 I
CJA07808 Caenorhabditis japonica CJA07808 I
CRE17142 Caenorhabditis remanei CRE17142 I
D917_07770 Trichinella nativa D917_07770 I
DICVIV_10692 Dictyocaulus viviparus DICVIV_10692 I
EFV53318 Trichinella spiralis EFV53318 I
Hba_12492 Heterorhabditis bacteriophora Hba_12492 I
HCOI00400800 Haemonchus contortus HCOI00400800 I
L596_g12501 Steinernema carpocapsae L596_g12501 I
L889_g30058 Steinernema feltiae L889_g30058 I
L892_g1322 Steinernema scapterisci L892_g1322 I
L893_g22395 Steinernema glaseri L893_g22395 I
L898_g26631 Steinernema monticolum L898_g26631 I
maker-nMf.1.1.scaf08525-snap-gene-0.5 Meloidogyne floridensis maker-nMf.1.1.scaf08525-snap-gene-0.5 I
MhA1_Contig575.frz3.gene2 Meloidogyne hapla MhA1_Contig575.frz3.gene2 I
Minc12888 Meloidogyne incognita Minc12888 I
NBR_0000708201 Nippostrongylus brasiliensis NBR_0000708201 I
nLs.2.1.2.g09564 Litomosoides sigmodontis nLs.2.1.2.g09564 I
OESDEN_02446 Oesophagostomum dentatum OESDEN_02446 I
PTRK_0000514200 Parastrongyloides trichosuri PTRK_0000514200 I
RSKR_0000808100 Rhabditophanes kr3021 RSKR_0000808100 I
SBAD_0000510501 Soboliphyme baturini SBAD_0000510501 I
scaffold28-EXSNAP2012.45 Pristionchus exspectatus scaffold28-EXSNAP2012.45 I
SPAL_0001464000 Strongyloides papillosus SPAL_0001464000 I
SSTP_0001056600 Strongyloides stercoralis SSTP_0001056600 I
SVE_0630300 Strongyloides venezuelensis SVE_0630300 I
SVUK_0001077701 Strongylus vulgaris SVUK_0001077701 I
TCNE_0001118001 Toxocara canis TCNE_0001118001 I
TELCIR_01774 Teladorsagia circumcincta TELCIR_01774 I
TMUE_s0016009100 Trichuris muris TMUE_s0016009100 I
TTRE_0000220801 Trichuris trichiura TTRE_0000220801 I
WBGene00240779 Onchocerca volvulus WBGene00240779 I
WUBG_01471 Wuchereria bancrofti WUBG_01471 I