CapteG199682 (Capitella teleta)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02257 (RFX_DNA_binding) IPR003150 CapteG199682 T318052_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RFX4
M02448_2.00 		Cavia porcellus
GTHDYYNNGN
NCNNRRHDAC		 PBM
Weirauch et al.(2014)
pTH9249 		0.670 0.441
Rfx4
M00186_2.00 		Mus musculus
GTHDYYNNSN
NSNNRRHDAC		 PBM
Badis et al.(2009)
Rfx4_3761 		0.670 0.441
RFX4
M03456_2.00 		Homo sapiens
NGTWRYCATRGHWACN
NGTWDCYATGRYWACN		 SELEX
Jolma et al.(2013)
RFX4_1 		0.670 0.441
RFX4
M03457_2.00 		Homo sapiens
NGTTGCYRRGCAACS
SGTTGCYYRGCAACN		 SELEX
Jolma et al.(2013)
RFX4_2 		0.670 0.441
RFX4
M05721_2.00 		Homo sapiens
BGTWRYCATGRYWACV
BGTWRYCATGRYWACV		 SELEX
Yin et al.(2017)
RFX4_eDBD_HT-SELEX 		0.670 0.441
RFX4
M05722_2.00 		Homo sapiens
BGTWRYCATGRYWACV
BGTWRYCATGRYWACV		 SELEX
Yin et al.(2017)
RFX4_eDBD_Methyl-HT-SELEX 		0.670 0.441
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CapteP199682 RFX 143 210

Links

Other RFX family TFs
Other Capitella teleta TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASIM_0001147101 Anisakis simplex ASIM_0001147101 N
BTMF_0001080901 Brugia timori BTMF_0001080901 N
D915_02473 Fasciola hepatica D915_02473 N
ECPE_0000536801 Echinostoma caproni ECPE_0000536801 N
ENSGMOG00000010503 Gadus morhua ENSGMOG00000010503 N
GL11071 Drosophila persimilis FBgn0148681 N
HCOI01912600 Haemonchus contortus HCOI01912600 I
HCOI01913300 Haemonchus contortus HCOI01913300 I
OESDEN_24828 Oesophagostomum dentatum OESDEN_24828 N
OFLC_0000261801 Onchocerca flexuosa OFLC_0000261801 N
Ssrp Drosophila pseudoobscura FBgn0078456 N
WUBG_16399 Wuchereria bancrofti WUBG_16399 N