CapteG199682 (Capitella teleta)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02257 (RFX_DNA_binding) IPR003150 CapteG199682 T318052_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RFX4
M02448_2.00 		Cavia porcellus
GTHDYYNNGN
NCNNRRHDAC		 PBM
Weirauch et al.(2014)
pTH9249 		0.670 0.441
Rfx4
M00186_2.00 		Mus musculus
GTHDYYNNSN
NSNNRRHDAC		 PBM
Badis et al.(2009)
Rfx4_3761 		0.670 0.441
RFX4
M03456_2.00 		Homo sapiens
NGTWRYCATRGHWACN
NGTWDCYATGRYWACN		 SELEX
Jolma et al.(2013)
RFX4_1 		0.670 0.441
RFX4
M03457_2.00 		Homo sapiens
NGTTGCYRRGCAACS
SGTTGCYYRGCAACN		 SELEX
Jolma et al.(2013)
RFX4_2 		0.670 0.441
RFX4
M05721_2.00 		Homo sapiens
BGTWRYCATGRYWACV
BGTWRYCATGRYWACV		 SELEX
Yin et al.(2017)
RFX4_eDBD_HT-SELEX 		0.670 0.441
RFX4
M05722_2.00 		Homo sapiens
BGTWRYCATGRYWACV
BGTWRYCATGRYWACV		 SELEX
Yin et al.(2017)
RFX4_eDBD_Methyl-HT-SELEX 		0.670 0.441
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CapteP199682 RFX 143 210

Links

Other RFX family TFs
Other Capitella teleta TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CapteG191221 Capitella teleta CapteG191221 N 0.682
CapteG183181 Capitella teleta CapteG183181 I 0.675
CGI_10018775 Crassostrea gigas CGI_10018775 I 0.674
Sakowv30039514m.g Saccoglossus kowalevskii Sakowv30039514m.g I 0.672
HelroG184328 Helobdella robusta HelroG184328 I 0.671
RFX4 Anolis carolinensis ENSACAG00000015355 I 0.670
ENSAMEG00000016059 Ailuropoda melanoleuca ENSAMEG00000016059 I 0.670
ENSAMXG00000020148 Astyanax mexicanus ENSAMXG00000020148 I 0.670
ENSAPLG00000005849 Anas platyrhynchos ENSAPLG00000005849 I 0.670
RFX4 Canis familiaris ENSCAFG00000001813 I 0.670
RFX4 Cavia porcellus ENSCPOG00000001750 D 0.670
ENSCSAG00000002952 Chlorocebus sabaeus ENSCSAG00000002952 I 0.670
rfx4 Danio rerio ENSDARG00000026395 I 0.670
Rfx4 Dipodomys ordii ENSDORG00000003959 I 0.670
RFX4 Equus caballus ENSECAG00000005111 I 0.670
ENSFALG00000013407 Ficedula albicollis ENSFALG00000013407 I 0.670
RFX4 Felis catus ENSFCAG00000015618 I 0.670
RFX4 Homo sapiens ENSG00000111783 D 0.670
RFX4 Gallus gallus ENSGALG00000012647 I 0.670
RFX4 Gorilla gorilla ENSGGOG00000007759 I 0.670
ENSGMOG00000004267 Gadus morhua ENSGMOG00000004267 I 0.670
ENSLACG00000017280 Latimeria chalumnae ENSLACG00000017280 I 0.670
RFX4 Loxodonta africana ENSLAFG00000014122 I 0.670
ENSLOCG00000015258 Lepisosteus oculatus ENSLOCG00000015258 I 0.670
RFX4 Meleagris gallopavo ENSMGAG00000012867 I 0.670
RFX4 Myotis lucifugus ENSMLUG00000016257 I 0.670
RFX4 Macaca mulatta ENSMMUG00000022118 I 0.670
ENSMPUG00000012144 Mustela putorius furo ENSMPUG00000012144 I 0.670
Rfx4 Mus musculus ENSMUSG00000020037 D 0.670
ENSNLEG00000006695 Nomascus leucogenys ENSNLEG00000006695 I 0.670
ENSOANG00000005534 Ornithorhynchus anatinus ENSOANG00000005534 I 0.670
ENSOARG00000017616 Ovis aries ENSOARG00000017616 I 0.670
RFX4 Oryctolagus cuniculus ENSOCUG00000028228 I 0.670
RFX4 Otolemur garnettii ENSOGAG00000003546 I 0.670
RFX4 Ochotona princeps ENSOPRG00000008616 I 0.670
ENSPANG00000006357 Papio anubis ENSPANG00000006357 I 0.670
RFX4 Procavia capensis ENSPCAG00000005023 I 0.670
ENSPPYG00000004906 Pongo abelii ENSPPYG00000004906 I 0.670
ENSPSIG00000015178 Pelodiscus sinensis ENSPSIG00000015178 I 0.670
RFX4 Pan troglodytes ENSPTRG00000005391 I 0.670
RFX4 Pteropus vampyrus ENSPVAG00000005862 I 0.670
ENSSHAG00000013027 Sarcophilus harrisii ENSSHAG00000013027 I 0.670
RFX4 Tupaia belangeri ENSTBEG00000014680 I 0.670
ENSTGUG00000011025 Taeniopygia guttata ENSTGUG00000011025 I 0.670
RFX4 Tursiops truncatus ENSTTRG00000010688 I 0.670
Aan_R008662 Calypte anna Aan_R008662 I 0.670
Afo_R011060 Aptenodytes forsteri Afo_R011060 I 0.670
Brh_R002885 Buceros rhinoceros Brh_R002885 I 0.670
ENSBTAP00000000169-D1 Bos grunniens ENSBTAP00000000169-D1 I 0.670
ENSP00000350552 Macaca fascicularis ENSP00000350552 I 0.670
Gfo_R004629 Geospiza fortis Gfo_R004629 I 0.670
Myotis_brandtii_RFX4_10020417 Myotis brandtii Myotis_brandtii_RFX4_10020417 I 0.670
DAPPUDRAFT_42744 Daphnia pulex DAPPUDRAFT_42744 I 0.669
rfx4 Gasterosteus aculeatus ENSGACG00000011830 I 0.669
ENSONIG00000014750 Oreochromis niloticus ENSONIG00000014750 I 0.669
rfx4 Oryzias latipes ENSORLG00000011114 I 0.669
ENSPFOG00000016523 Poecilia formosa ENSPFOG00000016523 I 0.669
ENSXMAG00000001638 Xiphophorus maculatus ENSXMAG00000001638 I 0.669
PHUM236330 Pediculus humanus PHUM236330 I 0.669
LotgiG113173 Lottia gigantea LotgiG113173 I 0.668
rfx4 Tetraodon nigroviridis ENSTNIG00000012137 I 0.667
rfx4 Takifugu rubripes ENSTRUG00000008925 I 0.667
Rfx4 Rattus norvegicus ENSRNOG00000051536 I 0.666
ENSSSCG00000000168 Sus scrofa ENSSSCG00000000168 I 0.666
tetur18g01090 Tetranychus urticae tetur18g01090 I 0.666
Alligator_sinensis_CCG009361.1 Alligator sinensis Alligator_sinensis_CCG009361.1 I 0.666
ML02801a Mnemiopsis leidyi ML02801a I 0.665
tetur35g00700 Tetranychus urticae tetur35g00700 I 0.665
ENSTSYG00000008562 Tarsius syrichta ENSTSYG00000008562 I 0.664
Sakowv30020494m.g Saccoglossus kowalevskii Sakowv30020494m.g I 0.664
CGI_10006760 Crassostrea gigas CGI_10006760 I 0.662
NEMVEDRAFT_v1g110404 Nematostella vectensis NEMVEDRAFT_v1g110404 I 0.661
fgenesh2_pg.scaffold_3000303 Monosiga brevicollis fgenesh2_pg.scaffold_3000303 I 0.660
Aqu1.223491 Amphimedon queenslandica Aqu1.223491 I 0.657
J056_003501 Wallemia ichthyophaga J056_003501 N 0.656
TriadG51266 Trichoplax adhaerens TriadG51266 I 0.655
NEMVEDRAFT_v1g122918 Nematostella vectensis NEMVEDRAFT_v1g122918 I 0.653
SMAR012474 Strigamia maritima SMAR012474 I 0.653
ENSSTOG00000015740 Ictidomys tridecemlineatus ENSSTOG00000015740 I 0.651
AMAG_10999 Allomyces macrogynus AMAG_10999 I 0.650
AMAG_11601 Allomyces macrogynus AMAG_11601 I 0.650