Pvit_05271 (Pogona vitticeps)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02257 (RFX_DNA_binding) IPR003150 Pvit_05271 T319016_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Rfx6
M09365_2.00 		Mus musculus
BDGTWKCYNDG
CHNRGMAACHV		 Misc
Kulakovskiy et al.(2013)
RFX6_MOUSE.H11MO.0.C 		0.658 0.969
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_05271 RFX 1 32

Links

Other RFX family TFs
Other Pogona vitticeps TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R004292 Calypte anna Aan_R004292 N
Alligator_sinensis_CCG002099.1 Alligator sinensis Alligator_sinensis_CCG002099.1 N
ENSCSAG00000013779 Chlorocebus sabaeus ENSCSAG00000013779 N
ENSFALG00000004762 Ficedula albicollis ENSFALG00000004762 N
ENSGMOG00000009038 Gadus morhua ENSGMOG00000009038 N
ENSLACG00000018073 Latimeria chalumnae ENSLACG00000018073 N
ENSMEUG00000015853 Macropus eugenii ENSMEUG00000015853 N
ENSMMUG00000022002 Macaca mulatta ENSMMUG00000022002 N
ENSMPUG00000012881 Mustela putorius furo ENSMPUG00000012881 N
ENSNLEG00000017189 Nomascus leucogenys ENSNLEG00000017189 N
ENSONIG00000010511 Oreochromis niloticus ENSONIG00000010511 N
ENSPANG00000024465 Papio anubis ENSPANG00000024465 N
ENSPPYG00000007793 Pongo abelii ENSPPYG00000007793 N
ENSPSIG00000013671 Pelodiscus sinensis ENSPSIG00000013671 N
ENSSHAG00000011609 Sarcophilus harrisii ENSSHAG00000011609 N
ENSSTOG00000011842 Ictidomys tridecemlineatus ENSSTOG00000011842 N
Gfo_R012738 Geospiza fortis Gfo_R012738 N
Ogr16274 Ophisaurus gracilis Ogr16274 N
Pvit_02550 Pogona vitticeps Pvit_02550 N
SGSM2 Sus scrofa ENSSSCG00000017829 N
SGSM2 Taeniopygia guttata ENSTGUG00000008737 N
sgsm2 Xenopus tropicalis XB-GENE-6050632 N
SGSM2 Callithrix jacchus ENSCJAG00000012412 N
SGSM2 Pteropus vampyrus ENSPVAG00000002165 N
SGSM2 Pan troglodytes ENSPTRG00000008548 N
SGSM2 Ornithorhynchus anatinus ENSOANG00000008634 N
Sgsm2 Mus musculus ENSMUSG00000038351 N
SGSM2 Monodelphis domestica ENSMODG00000010704 N
SGSM2 Meleagris gallopavo ENSMGAG00000008568 N
SGSM2 Loxodonta africana ENSLAFG00000014571 N
SGSM2 Gorilla gorilla ENSGGOG00000002449 N
SGSM2 Gallus gallus ENSGALG00000005737 N
SGSM2 Homo sapiens ENSG00000141258 N
SGSM2 Equus caballus ENSECAG00000010959 N