CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG002099.1
(
Alligator sinensis
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Alligator_sinensis_CCG002099.1
T027947_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG002099.1
BED ZF
258
290
SVYWDYALIVPFSQIVCIHCHQQPESGGTLVLV
Links
Other
BED ZF
family TFs
Other
Alligator sinensis
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPSIG00000013671
Pelodiscus sinensis
ENSPSIG00000013671
N
0.970
Pvit_02550
Pogona vitticeps
Pvit_02550
N
0.939
SGSM2
Anolis carolinensis
ENSACAG00000011801
N
0.939
Ogr16274
Ophisaurus gracilis
Ogr16274
N
0.939
SGSM2
Gallus gallus
ENSGALG00000005737
N
0.879
Aan_R004292
Calypte anna
Aan_R004292
N
0.875
ENSSHAG00000011609
Sarcophilus harrisii
ENSSHAG00000011609
N
0.862
SGSM2
Monodelphis domestica
ENSMODG00000010704
N
0.862
SGSM2
Meleagris gallopavo
ENSMGAG00000008568
N
0.833
SGSM2
Ornithorhynchus anatinus
ENSOANG00000008634
N
0.833
ENSMEUG00000015853
Macropus eugenii
ENSMEUG00000015853
N
0.828
Gfo_R012738
Geospiza fortis
Gfo_R012738
N
0.806
SGSM2
Sus scrofa
ENSSSCG00000017829
N
0.800
ENSSTOG00000011842
Ictidomys tridecemlineatus
ENSSTOG00000011842
N
0.800
SGSM2
Pteropus vampyrus
ENSPVAG00000002165
N
0.800
Sgsm2
Mus musculus
ENSMUSG00000038351
N
0.800
SGSM2
Equus caballus
ENSECAG00000010959
N
0.800
SGSM2
Loxodonta africana
ENSLAFG00000014571
N
0.800
ENSMPUG00000012881
Mustela putorius furo
ENSMPUG00000012881
N
0.800
SGSM2
Callithrix jacchus
ENSCJAG00000012412
N
0.794
ENSLACG00000018073
Latimeria chalumnae
ENSLACG00000018073
N
0.793
ENSMMUG00000022002
Macaca mulatta
ENSMMUG00000022002
N
0.767
ENSCSAG00000013779
Chlorocebus sabaeus
ENSCSAG00000013779
N
0.767
ENSNLEG00000017189
Nomascus leucogenys
ENSNLEG00000017189
N
0.767
sgsm2
Xenopus tropicalis
XB-GENE-6050632
N
0.767
ENSPPYG00000007793
Pongo abelii
ENSPPYG00000007793
N
0.767
SGSM2
Homo sapiens
ENSG00000141258
N
0.767
SGSM2
Gorilla gorilla
ENSGGOG00000002449
N
0.767
SGSM2
Pan troglodytes
ENSPTRG00000008548
N
0.767
ENSPANG00000024465
Papio anubis
ENSPANG00000024465
N
0.767
ENSONIG00000010511
Oreochromis niloticus
ENSONIG00000010511
N
0.735
ENSGMOG00000009038
Gadus morhua
ENSGMOG00000009038
N
0.735
SGSM2
Taeniopygia guttata
ENSTGUG00000008737
N
0.710
ENSFALG00000004762
Ficedula albicollis
ENSFALG00000004762
N
0.710