CapteG142159 (Capitella teleta)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 CapteG142159 T319308_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.762 0.762
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.762 0.762
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.762 0.762
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.762 0.762
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.738 0.738
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.738 0.738
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.738 0.738
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.738 0.738
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.738 0.738
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.738 0.738
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.738 0.738
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.738 0.738
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.738 0.738
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.738 0.738
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.738 0.738
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.738 0.738
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.738 0.738
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.738 0.738
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.738 0.738
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.738 0.738
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.738 0.738
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.738 0.738
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.738 0.738
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.738 0.738
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.738 0.738
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.738 0.738
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.738 0.738
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.738 0.738
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.731 0.731
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.731 0.731
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.731 0.731
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.731 0.731
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.731 0.731
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.731 0.731
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.731 0.731
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.731 0.731
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.731 0.731
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.731 0.731
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.731 0.731
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.731 0.731
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CapteP142159 Runt 10 139

Links

Other Runt family TFs
Other Capitella teleta TFs

265 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R007733 Calypte anna Aan_R007733 I 0.000
Afo_R009498 Aptenodytes forsteri Afo_R009498 I 0.000
Alligator_sinensis_CCG006997.1 Alligator sinensis Alligator_sinensis_CCG006997.1 I 0.000
Cmyd_10012130 Chelonia mydas Cmyd_10012130 I 0.000
ENSACAG00000010131 Anolis carolinensis ENSACAG00000010131 I 0.000
ENSAMEG00000018009 Ailuropoda melanoleuca ENSAMEG00000018009 I 0.000
ENSCSAG00000007633 Chlorocebus sabaeus ENSCSAG00000007633 I 0.000
ENSECAG00000015450 Equus caballus ENSECAG00000015450 I 0.000
ENSFALG00000013006 Ficedula albicollis ENSFALG00000013006 I 0.000
ENSGALG00000004073 Gallus gallus ENSGALG00000004073 I 0.000
ENSMGAG00000004157_CONSTRUCT PBM CONSTRUCTS ENSMGAG00000004157_CONSTRUCT D 0.000
ENSMPUG00000012204 Mustela putorius furo ENSMPUG00000012204 I 0.000
ENSNLEG00000011782 Nomascus leucogenys ENSNLEG00000011782 I 0.000
ENSOANG00000015049 Ornithorhynchus anatinus ENSOANG00000015049 I 0.000
ENSOARG00000005141 Ovis aries ENSOARG00000005141 I 0.000
ENSOPRG00000005862 Ochotona princeps ENSOPRG00000005862 I 0.000
ENSP00000362748-D1 Bos grunniens ENSP00000362748-D1 I 0.000
ENSPANG00000022122 Papio anubis ENSPANG00000022122 I 0.000
ENSPPYG00000002393 Pongo abelii ENSPPYG00000002393 I 0.000
ENSPSIG00000006159 Pelodiscus sinensis ENSPSIG00000006159 I 0.000
ENSTGUG00000003754 Taeniopygia guttata ENSTGUG00000003754 I 0.000
ENSTSYG00000006963 Tarsius syrichta ENSTSYG00000006963 I 0.000
Gfo_R013982 Geospiza fortis Gfo_R013982 I 0.000
Myotis_brandtii_TET1_10018894 Myotis brandtii Myotis_brandtii_TET1_10018894 I 0.000
Ogr07249 Ophisaurus gracilis Ogr07249 I 0.000
Pvit_00547 Pogona vitticeps Pvit_00547 I 0.000
Sakowv30045758m.g Saccoglossus kowalevskii Sakowv30045758m.g I 0.000
TET1 Cavia porcellus ENSCPOG00000009306 I 0.000
TET1 Macaca mulatta ENSMMUG00000023198 I 0.000
TET1 Bos taurus ENSBTAG00000037756 I 0.000
TET1 Meleagris gallopavo ENSMGAG00000004157 I 0.000
TET1 Loxodonta africana ENSLAFG00000006171 I 0.000
TET1 Gorilla gorilla ENSGGOG00000011822 I 0.000
TET1 Homo sapiens ENSG00000138336 D 0.000
TET1 Oryctolagus cuniculus ENSOCUG00000013277 I 0.000
TET1 Canis familiaris ENSCAFG00000013739 I 0.000
TET1 Callithrix jacchus ENSCJAG00000019005 I 0.000
TET1 Procavia capensis ENSPCAG00000007795 I 0.000
TET1 Dasypus novemcinctus ENSDNOG00000018763 I 0.000
TET1 Vicugna pacos ENSVPAG00000011820 I 0.000
TET1 Tursiops truncatus ENSTTRG00000001566 I 0.000
TET1 Otolemur garnettii ENSOGAG00000034454 I 0.000
TET1 Felis catus ENSFCAG00000012673 I 0.000
TET1 Sorex araneus ENSSARG00000011693 I 0.000
TET1 Pteropus vampyrus ENSPVAG00000003593 I 0.000
TET1 Pan troglodytes ENSPTRG00000002558 I 0.000