KGM_02818 (Danaus plexippus)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 KGM_02818 T319584_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.745 0.745
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.745 0.745
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.745 0.745
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.745 0.745
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.745 0.745
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.745 0.745
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.745 0.745
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.745 0.745
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.745 0.745
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.745 0.745
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.745 0.745
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.745 0.745
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.735 0.735
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.735 0.735
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.735 0.735
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.735 0.735
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.735 0.735
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.735 0.735
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.735 0.735
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.735 0.735
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.735 0.735
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.735 0.735
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.735 0.735
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.735 0.735
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.735 0.735
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.735 0.735
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.735 0.735
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.735 0.735
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.735 0.735
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.735 0.735
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.735 0.735
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.735 0.735
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.735 0.735
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.735 0.735
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.735 0.735
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.735 0.735
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EHJ71640 Runt 42 139

Links

Other Runt family TFs
Other Danaus plexippus TFs

151 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL002423 Aedes aegypti AAEL002423 I
AALB002515 Anopheles albimanus AALB002515 I
Aan_R004859 Calypte anna Aan_R004859 I
AARA005336 Anopheles arabiensis AARA005336 I
AATE010223 Anopheles atroparvus AATE010223 I
ACHR001840 Anopheles christyi ACHR001840 I
ACOM029750 Anopheles coluzzii ACOM029750 I
ACUA000831 Anopheles culicifacies ACUA000831 I
ADIR005442 Anopheles dirus ADIR005442 I
AEPI007770 Anopheles epiroticus AEPI007770 I
AFAF019328 Anopheles farauti AFAF019328 I
AFUN005909 Anopheles funestus AFUN005909 I
Alligator_sinensis_CCG007905.1 Alligator sinensis Alligator_sinensis_CCG007905.1 I
AMAM001941 Anopheles maculatus AMAM001941 I
AMEC002742 Anopheles melas AMEC002742 I
AMEM001490 Anopheles merus AMEM001490 I
AMIN004773 Anopheles minimus AMIN004773 I
AQUA008454 Anopheles quadriannulatus AQUA008454 I
ASIS021599 Anopheles sinensis ASIS021599 I
ASTEI10695 Anopheles stephensi ASTEI10695 I
Cmyd_10016492 Chelonia mydas Cmyd_10016492 I
CPIJ009732 Culex quinquefasciatus CPIJ009732 I
CpipJ_CPIJ009732 Culex pipiens CpipJ_CPIJ009732 I
ENSAMEG00000014235 Ailuropoda melanoleuca ENSAMEG00000014235 I
ENSAMXG00000025833 Astyanax mexicanus ENSAMXG00000025833 I
ENSCPOG00000001740 Cavia porcellus ENSCPOG00000001740 I
ENSCSAG00000003094 Chlorocebus sabaeus ENSCSAG00000003094 I
ENSFALG00000011490 Ficedula albicollis ENSFALG00000011490 I
ENSGMOG00000018978 Gadus morhua ENSGMOG00000018978 I
ENSLACG00000004329 Latimeria chalumnae ENSLACG00000004329 I
ENSLOCG00000013581 Lepisosteus oculatus ENSLOCG00000013581 I
ENSMEUG00000010715 Macropus eugenii ENSMEUG00000010715 I
ENSMMUG00000018749 Macaca mulatta ENSMMUG00000018749 I
ENSMPUG00000001909 Mustela putorius furo ENSMPUG00000001909 I
ENSNLEG00000006670 Nomascus leucogenys ENSNLEG00000006670 I
ENSOARG00000015352 Ovis aries ENSOARG00000015352 I
ENSOCUG00000016256 Oryctolagus cuniculus ENSOCUG00000016256 I
ENSONIG00000016059 Oreochromis niloticus ENSONIG00000016059 I
ENSP00000352565-D1 Bos grunniens ENSP00000352565-D1 I
ENSPANG00000023378 Papio anubis ENSPANG00000023378 I
ENSPFOG00000009546 Poecilia formosa ENSPFOG00000009546 I
ENSPPYG00000015208 Pongo abelii ENSPPYG00000015208 I
ENSSHAG00000011188 Sarcophilus harrisii ENSSHAG00000011188 I
ENSSSCG00000009703 Sus scrofa ENSSSCG00000009703 I
ENSSTOG00000023020 Ictidomys tridecemlineatus ENSSTOG00000023020 I
ENSXMAG00000015868 Xiphophorus maculatus ENSXMAG00000015868 I
estExt_fgenesh2_pm.C_20027 Branchiostoma floridae estExt_fgenesh2_pm.C_20027 I
e_gw.829.7.1 Branchiostoma floridae e_gw.829.7.1 I
Gfo_R010505 Geospiza fortis Gfo_R010505 I
HAND2 Equus caballus ENSECAG00000009657 I
HAND2 Monodelphis domestica ENSMODG00000003548 I
HAND2 Myotis lucifugus ENSMLUG00000002599 I
HAND2 Loxodonta africana ENSLAFG00000029843 I
HAND2 Gorilla gorilla ENSGGOG00000006147 I
hand2 Gasterosteus aculeatus ENSGACG00000016418 I
HAND2 Homo sapiens ENSG00000164107 D
HAND2 Felis catus ENSFCAG00000031585 I
HAND2 Taeniopygia guttata ENSTGUG00000006281 I
Hand2 Dipodomys ordii ENSDORG00000007304 I
HAND2 Dasypus novemcinctus ENSDNOG00000035702 I
hand2 Danio rerio ENSDARG00000008305 I
HAND2 Callithrix jacchus ENSCJAG00000005144 I
HAND2 Canis familiaris ENSCAFG00000007858 I
HAND2 Bos taurus ENSBTAG00000044123 I
Hand2 Mus musculus ENSMUSG00000038193 I
HAND2 Otolemur garnettii ENSOGAG00000027928 I
HAND2 Ochotona princeps ENSOPRG00000010154 I
hand2 Xenopus tropicalis XB-GENE-481426 I
hand2 Oryzias latipes ENSORLG00000010967 I
HAND2 Pan troglodytes ENSPTRG00000016601 I
HAND2 Vicugna pacos ENSVPAG00000006724 I
HAND2 Tursiops truncatus ENSTTRG00000001365 I
hand2 Tetraodon nigroviridis ENSTNIG00000005584 I
HAND2 Tupaia belangeri ENSTBEG00000007591 I
hand2.S Xenopus laevis XB-GENE-6252408 I
LLOJ007342 Lutzomyia longipalpis LLOJ007342 I
Ogr14661 Ophisaurus gracilis Ogr14661 I
PPAI010228 Phlebotomus papatasi PPAI010228 I
RPRC005573 Rhodnius prolixus RPRC005573 I
Sakowv30003804m.g Saccoglossus kowalevskii Sakowv30003804m.g I