ACUA016618 (Anopheles culicifacies)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 ACUA016618 T319736_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
run
M06444_2.00 		Drosophila melanogaster
WAACCGCAR
YTGCGGTTW		 B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300 		0.838 0.838
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.708 0.708
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.708 0.708
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.708 0.708
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.708 0.708
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.708 0.708
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.708 0.708
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.708 0.708
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.708 0.708
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.708 0.708
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.708 0.708
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.708 0.708
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.708 0.708
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.708 0.708
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.708 0.708
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.708 0.708
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACUA016618-PA Runt 27 156

Links

Other Runt family TFs
Other Anopheles culicifacies TFs

231 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB007753 Anopheles albimanus AALB007753 I 0.723
AALB009220 Anopheles albimanus AALB009220 I 0.731
AARA004356 Anopheles arabiensis AARA004356 I 0.738
AARA011332 Anopheles arabiensis AARA011332 I 0.701
ACHR004078 Anopheles christyi ACHR004078 I 0.738
ACOM036889 Anopheles coluzzii ACOM036889 N 0.000
ACUA000036 Anopheles culicifacies ACUA000036 I 0.000
AEPI003479 Anopheles epiroticus AEPI003479 I 0.738
AFAF001885 Anopheles farauti AFAF001885 N 0.000
AFAF002111 Anopheles farauti AFAF002111 I 0.000
AFUN005474 Anopheles funestus AFUN005474 I 0.000
AGAP002506 Anopheles gambiae AGAP002506 I 0.738
AMEC020337 Anopheles melas AMEC020337 N 0.000
AMEM017856 Anopheles merus AMEM017856 I 0.738
AMIN002518 Anopheles minimus AMIN002518 I 0.738
AMIN005760 Anopheles minimus AMIN005760 I 0.000
AQUA008686 Anopheles quadriannulatus AQUA008686 I 0.716
AQUA009447 Anopheles quadriannulatus AQUA009447 N 0.000
ASIS002518 Anopheles sinensis ASIS002518 I 0.723
ASTEI07959 Anopheles stephensi ASTEI07959 I 0.738
CPIJ006372 Culex quinquefasciatus CPIJ006372 I 0.742
CPIJ016826 Culex quinquefasciatus CPIJ016826 I 0.726
CpipJ_CPIJ006372 Culex pipiens CpipJ_CPIJ006372 I 0.742
CpipJ_CPIJ016826 Culex pipiens CpipJ_CPIJ016826 I 0.726
Gfo_R015914 Geospiza fortis Gfo_R015914 I 0.734
GH11831 Drosophila grimshawi FBgn0119310 I 0.000
GI15484 Drosophila mojavensis FBgn0138233 I 0.701
HMEL009843 Heliconius melpomene HMEL009843 I 0.716
LCUP002648 Lucilia cuprina LCUP002648 I 0.000
LCUP002652 Lucilia cuprina LCUP002652 I 0.723
LLOJ002049 Lutzomyia longipalpis LLOJ002049 I 0.000
MESCA007079 Megaselia scalaris MESCA007079 I 0.822
RPRC000026 Rhodnius prolixus RPRC000026 I 0.702
Runx1 Mus musculus ENSMUSG00000022952 D 0.758
runx1 Danio rerio ENSDARG00000087646 I 0.734
SINV13345 Solenopsis invicta SINV13345 I 0.717