CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig405.frz3.gene22
(
Meloidogyne hapla
)
Runt
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00853 (Runt)
IPR013524
MhA1_Contig405.frz3.gene22
T319826_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig405.frz3.gene22
Runt
20
129
EALRRISGQCRLQNTCHSDVFCSRIPAHWRSNKSLPTPFIILALCPIPDGTRVCVSAGNDENFCADVKNNTAEFIGQMARFSDLRFVGKSGRGKNFNLSITIFTIPLTQA
Links
Other
Runt
family TFs
Other
Meloidogyne hapla
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CRE06203
Caenorhabditis remanei
CRE06203
N
CRE06207
Caenorhabditis remanei
CRE06207
N
CRE20139
Caenorhabditis remanei
CRE20139
N
CRE20140
Caenorhabditis remanei
CRE20140
N
CRE21434
Caenorhabditis remanei
CRE21434
N
CRE21437
Caenorhabditis remanei
CRE21437
N
CRE21456
Caenorhabditis remanei
CRE21456
N
CRE21459
Caenorhabditis remanei
CRE21459
N
CRE23214
Caenorhabditis remanei
CRE23214
N