POPTR_0009s16780 (Populus trichocarpa)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 POPTR_0009s16780 T320746_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.711 0.711
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0009s16780.1 RWP-RK 82 130

Links

Other RWP-RK family TFs
Other Populus trichocarpa TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
2111505A Xenopus laevis 2111505A I 0.000
Aan_R004820 Calypte anna Aan_R004820 I 0.000
Aan_R006139 Calypte anna Aan_R006139 I 0.000
Aan_R008719 Calypte anna Aan_R008719 I 0.000
Aan_R011092 Calypte anna Aan_R011092 I 0.000
AAY99628 Xenopus tropicalis AAY99628 I 0.000
Afo_R007497 Aptenodytes forsteri Afo_R007497 I 0.000
Afo_R010307 Aptenodytes forsteri Afo_R010307 I 0.000
Afo_R010643 Aptenodytes forsteri Afo_R010643 I 0.000
Alligator_sinensis_CCG005119.1 Alligator sinensis Alligator_sinensis_CCG005119.1 I 0.000
Alligator_sinensis_CCG009407.1 Alligator sinensis Alligator_sinensis_CCG009407.1 I 0.000
Alligator_sinensis_CCG020348.1 Alligator sinensis Alligator_sinensis_CCG020348.1 I 0.000
Alligator_sinensis_CCG020800.1 Alligator sinensis Alligator_sinensis_CCG020800.1 I 0.000
BGLB013872 Biomphalaria glabrata BGLB013872 I 0.000
Brh_R011298 Buceros rhinoceros Brh_R011298 I 0.000
CapteG111699 Capitella teleta CapteG111699 I 0.000
CapteG169232 Capitella teleta CapteG169232 I 0.000
CBG21175 Caenorhabditis briggsae CBG21175 N 0.000
CGI_10016130 Crassostrea gigas CGI_10016130 I 0.000
Cmyd_10009140 Chelonia mydas Cmyd_10009140 I 0.000
Cmyd_10010338 Chelonia mydas Cmyd_10010338 I 0.000
Cmyd_10015861 Chelonia mydas Cmyd_10015861 I 0.000
ENSAMEG00000003939 Ailuropoda melanoleuca ENSAMEG00000003939 I 0.000
ENSAMEG00000018597 Ailuropoda melanoleuca ENSAMEG00000018597 I 0.000
ENSAMEG00000019191 Ailuropoda melanoleuca ENSAMEG00000019191 I 0.000
ENSAMEG00000019439 Ailuropoda melanoleuca ENSAMEG00000019439 I 0.000
ENSAMXG00000001281 Astyanax mexicanus ENSAMXG00000001281 I 0.000
ENSAMXG00000014944 Astyanax mexicanus ENSAMXG00000014944 I 0.000
ENSAMXG00000024826 Astyanax mexicanus ENSAMXG00000024826 I 0.000
ENSAMXG00000026481 Astyanax mexicanus ENSAMXG00000026481 I 0.000
ENSAMXG00000026500 Astyanax mexicanus ENSAMXG00000026500 I 0.000
ENSAPLG00000001566 Anas platyrhynchos ENSAPLG00000001566 I 0.000
ENSAPLG00000009187 Anas platyrhynchos ENSAPLG00000009187 I 0.000
ENSBTAP00000000728-D1 Bos grunniens ENSBTAP00000000728-D1 I 0.000
ENSBTAP00000002301-D1 Bos grunniens ENSBTAP00000002301-D1 I 0.000
ENSBTAP00000005381-D1 Bos grunniens ENSBTAP00000005381-D1 I 0.000
ENSCPOG00000002240 Cavia porcellus ENSCPOG00000002240 I 0.000
ENSCSAG00000018652 Chlorocebus sabaeus ENSCSAG00000018652 I 0.000
ENSCSAG00000019039 Chlorocebus sabaeus ENSCSAG00000019039 I 0.000
ENSCSAG00000019605 Chlorocebus sabaeus ENSCSAG00000019605 I 0.000
ENSDORG00000012142 Dipodomys ordii ENSDORG00000012142 I 0.000
ENSFALG00000000552 Ficedula albicollis ENSFALG00000000552 I 0.000
ENSFALG00000014089 Ficedula albicollis ENSFALG00000014089 I 0.000
ENSFALG00000015099 Ficedula albicollis ENSFALG00000015099 I 0.000
ENSFALG00000015273 Ficedula albicollis ENSFALG00000015273 I 0.000
ENSGALG00000012235 Gallus gallus ENSGALG00000012235 I 0.000
ENSGALG00000024396 Gallus gallus ENSGALG00000024396 I 0.000
ENSGALG00000028276 Gallus gallus ENSGALG00000028276 I 0.000
ENSGMOG00000000168 Gadus morhua ENSGMOG00000000168 I 0.000
ENSGMOG00000000887 Gadus morhua ENSGMOG00000000887 I 0.000
ENSGMOG00000006899 Gadus morhua ENSGMOG00000006899 I 0.000
ENSGMOG00000009610 Gadus morhua ENSGMOG00000009610 I 0.000
ENSGMOG00000014666 Gadus morhua ENSGMOG00000014666 I 0.000
ENSGMOG00000017265 Gadus morhua ENSGMOG00000017265 I 0.000
ENSLACG00000002237 Latimeria chalumnae ENSLACG00000002237 I 0.000
ENSLACG00000013009 Latimeria chalumnae ENSLACG00000013009 I 0.000
ENSLACG00000013264 Latimeria chalumnae ENSLACG00000013264 I 0.000
ENSLACG00000016624 Latimeria chalumnae ENSLACG00000016624 I 0.000
ENSLOCG00000012935 Lepisosteus oculatus ENSLOCG00000012935 I 0.000
ENSLOCG00000017518 Lepisosteus oculatus ENSLOCG00000017518 I 0.000
ENSLOCG00000017829 Lepisosteus oculatus ENSLOCG00000017829 I 0.000
ENSLOCG00000018210 Lepisosteus oculatus ENSLOCG00000018210 I 0.000
ENSMEUG00000016098 Macropus eugenii ENSMEUG00000016098 I 0.000
ENSMICG00000012663 Microcebus murinus ENSMICG00000012663 I 0.000
ENSMMUG00000002604 Macaca mulatta ENSMMUG00000002604 I 0.000
ENSMPUG00000005372 Mustela putorius furo ENSMPUG00000005372 I 0.000
ENSMPUG00000018960 Mustela putorius furo ENSMPUG00000018960 I 0.000
ENSMPUG00000019108 Mustela putorius furo ENSMPUG00000019108 I 0.000
ENSMPUG00000020084 Mustela putorius furo ENSMPUG00000020084 I 0.000
ENSNLEG00000000900 Nomascus leucogenys ENSNLEG00000000900 I 0.000
ENSNLEG00000006322 Nomascus leucogenys ENSNLEG00000006322 I 0.000
ENSNLEG00000015231 Nomascus leucogenys ENSNLEG00000015231 I 0.000
ENSNLEG00000017618 Nomascus leucogenys ENSNLEG00000017618 I 0.000
ENSOARG00000008435 Ovis aries ENSOARG00000008435 I 0.000
ENSOARG00000011334 Ovis aries ENSOARG00000011334 I 0.000
ENSOARG00000018394 Ovis aries ENSOARG00000018394 I 0.000
ENSONIG00000006878 Oreochromis niloticus ENSONIG00000006878 I 0.000
ENSONIG00000009263 Oreochromis niloticus ENSONIG00000009263 I 0.000
ENSONIG00000020540 Oreochromis niloticus ENSONIG00000020540 I 0.000
ENSONIG00000020931 Oreochromis niloticus ENSONIG00000020931 I 0.000
ENSONIG00000021173 Oreochromis niloticus ENSONIG00000021173 I 0.000
ENSONIG00000021273 Oreochromis niloticus ENSONIG00000021273 I 0.000
ENSORLG00000019867 Oryzias latipes ENSORLG00000019867 I 0.000
ENSP00000242994 Macaca fascicularis ENSP00000242994 I 0.000
ENSP00000242994-D1 Bos grunniens ENSP00000242994-D1 I 0.000
ENSP00000295108 Macaca fascicularis ENSP00000295108 I 0.000
ENSP00000297142 Macaca fascicularis ENSP00000297142 I 0.000
ENSPANG00000007303 Papio anubis ENSPANG00000007303 I 0.000
ENSPANG00000021818 Papio anubis ENSPANG00000021818 I 0.000
ENSPANG00000024988 Papio anubis ENSPANG00000024988 I 0.000
ENSPFOG00000005949 Poecilia formosa ENSPFOG00000005949 I 0.000
ENSPFOG00000008824 Poecilia formosa ENSPFOG00000008824 I 0.000
ENSPFOG00000014944 Poecilia formosa ENSPFOG00000014944 I 0.000
ENSPFOG00000019942 Poecilia formosa ENSPFOG00000019942 I 0.000
ENSPFOG00000020285 Poecilia formosa ENSPFOG00000020285 I 0.000
ENSPMAG00000007548 Petromyzon marinus ENSPMAG00000007548 I 0.000
ENSPPYG00000004613 Pongo abelii ENSPPYG00000004613 I 0.000
ENSPPYG00000008486 Pongo abelii ENSPPYG00000008486 I 0.000
ENSPPYG00000017666 Pongo abelii ENSPPYG00000017666 I 0.000
ENSPPYG00000029484 Pongo abelii ENSPPYG00000029484 I 0.000
ENSPSIG00000000416 Pelodiscus sinensis ENSPSIG00000000416 I 0.000
ENSPSIG00000001006 Pelodiscus sinensis ENSPSIG00000001006 I 0.000
ENSPSIG00000001535 Pelodiscus sinensis ENSPSIG00000001535 I 0.000
ENSPSIG00000001952 Pelodiscus sinensis ENSPSIG00000001952 I 0.000
ENSSHAG00000008330 Sarcophilus harrisii ENSSHAG00000008330 I 0.000
ENSSHAG00000009773 Sarcophilus harrisii ENSSHAG00000009773 I 0.000
ENSSHAG00000015217 Sarcophilus harrisii ENSSHAG00000015217 I 0.000
ENSSSCG00000000300 Sus scrofa ENSSSCG00000000300 I 0.000
ENSSTOG00000002956 Ictidomys tridecemlineatus ENSSTOG00000002956 I 0.000
ENSSTOG00000019627 Ictidomys tridecemlineatus ENSSTOG00000019627 I 0.000
ENSSTOG00000020820 Ictidomys tridecemlineatus ENSSTOG00000020820 I 0.000
ENSSTOG00000024443 Ictidomys tridecemlineatus ENSSTOG00000024443 I 0.000
ENSTSYG00000003704 Tarsius syrichta ENSTSYG00000003704 I 0.000
ENSTSYG00000012547 Tarsius syrichta ENSTSYG00000012547 I 0.000
ENSXMAG00000001517 Xiphophorus maculatus ENSXMAG00000001517 I 0.000
ENSXMAG00000011061 Xiphophorus maculatus ENSXMAG00000011061 I 0.000
ENSXMAG00000019613 Xiphophorus maculatus ENSXMAG00000019613 I 0.000
ENSXMAG00000019741 Xiphophorus maculatus ENSXMAG00000019741 I 0.000
ENSXMAG00000020272 Xiphophorus maculatus ENSXMAG00000020272 I 0.000
Gfo_R001419 Geospiza fortis Gfo_R001419 I 0.000
Gfo_R005849 Geospiza fortis Gfo_R005849 I 0.000
Gfo_R016263 Geospiza fortis Gfo_R016263 I 0.000
gw.499.29.1 Branchiostoma floridae gw.499.29.1 I 0.000
HelroG70666 Helobdella robusta HelroG70666 I 0.000
LotgiG59712 Lottia gigantea LotgiG59712 I 0.000
Myotis_brandtii_NEUROD1_10035039 Myotis brandtii Myotis_brandtii_NEUROD1_10035039 I 0.000
Myotis_brandtii_Neurod2_10030393 Myotis brandtii Myotis_brandtii_Neurod2_10030393 I 0.000
Myotis_brandtii_NEUROD4_10003502 Myotis brandtii Myotis_brandtii_NEUROD4_10003502 I 0.000
Myotis_brandtii_NEUROD6_10033978 Myotis brandtii Myotis_brandtii_NEUROD6_10033978 I 0.000
NEUROD1 Bos taurus ENSBTAG00000001755 I 0.000
NEUROD1 Callithrix jacchus ENSCJAG00000011529 I 0.000
NEUROD1 Cavia porcellus ENSCPOG00000025248 I 0.000
neurod1 Danio rerio ENSDARG00000019566 I 0.000
NEUROD1 Dasypus novemcinctus ENSDNOG00000012297 I 0.000
NEUROD1 Equus caballus ENSECAG00000012181 I 0.000
NEUROD1 Echinops telfairi ENSETEG00000018112 I 0.000
NEUROD1 Felis catus ENSFCAG00000004553 I 0.000
NEUROD1 Homo sapiens ENSG00000162992 D 0.000
neurod1 Gasterosteus aculeatus ENSGACG00000002064 I 0.000
NEUROD1 Gallus gallus ENSGALG00000008908 I 0.000
NEUROD1 Gorilla gorilla ENSGGOG00000027940 I 0.000
NEUROD1 Loxodonta africana ENSLAFG00000000612 I 0.000
NEUROD1 Myotis lucifugus ENSMLUG00000025259 I 0.000
NEUROD1 Macaca mulatta ENSMMUG00000008296 I 0.000
NEUROD1 Monodelphis domestica ENSMODG00000010392 I 0.000
Neurod1 Mus musculus ENSMUSG00000034701 D 0.000
NEUROD1 Ornithorhynchus anatinus ENSOANG00000003630 I 0.000
NEUROD1 Otolemur garnettii ENSOGAG00000025613 I 0.000
NEUROD1 Ochotona princeps ENSOPRG00000008607 I 0.000
neurod1 Oryzias latipes ENSORLG00000010563 I 0.000
NEUROD1 Procavia capensis ENSPCAG00000008927 I 0.000
NEUROD1 Pan troglodytes ENSPTRG00000012702 I 0.000
Neurod1 Rattus norvegicus ENSRNOG00000005609 I 0.000
NEUROD1 Sorex araneus ENSSARG00000008648 I 0.000
NEUROD1 Sus scrofa ENSSSCG00000016011 I 0.000
neurod1 Tetraodon nigroviridis ENSTNIG00000003533 I 0.000
neurod1 Takifugu rubripes ENSTRUG00000014252 I 0.000
NEUROD1 Tursiops truncatus ENSTTRG00000016757 I 0.000
neurod1 Xenopus tropicalis XB-GENE-963757 I 0.000
neurod1.L Xenopus laevis XB-GENE-6252655 I 0.000
neurod1.S Xenopus laevis XB-GENE-963762 I 0.000
NEUROD2 Anolis carolinensis ENSACAG00000017561 I 0.000
NEUROD2 Bos taurus ENSBTAG00000004119 I 0.000
NEUROD2 Canis familiaris ENSCAFG00000016407 I 0.000
NEUROD2 Callithrix jacchus ENSCJAG00000008704 I 0.000
neurod2 Danio rerio ENSDARG00000016854 I 0.000
NEUROD2 Dasypus novemcinctus ENSDNOG00000013872 I 0.000
NEUROD2 Equus caballus ENSECAG00000020811 I 0.000
NEUROD2 Felis catus ENSFCAG00000027653 I 0.000
NEUROD2 Homo sapiens ENSG00000171532 D 0.000
NEUROD2 Gasterosteus aculeatus ENSGACG00000008918 I 0.000
NEUROD2 Gorilla gorilla ENSGGOG00000000493 I 0.000
NEUROD2 Loxodonta africana ENSLAFG00000029558 I 0.000
NEUROD2 Macaca mulatta ENSMMUG00000001404 I 0.000
Neurod2 Mus musculus ENSMUSG00000038255 D 0.000
NEUROD2 Ornithorhynchus anatinus ENSOANG00000003622 I 0.000
NEUROD2 Oryctolagus cuniculus ENSOCUG00000023536 I 0.000
NEUROD2 Otolemur garnettii ENSOGAG00000010543 I 0.000
NEUROD2 Ochotona princeps ENSOPRG00000013289 I 0.000
NEUROD2 Oryzias latipes ENSORLG00000003441 I 0.000
NEUROD2 Pan troglodytes ENSPTRG00000009094 I 0.000
NEUROD2 Pteropus vampyrus ENSPVAG00000008509 I 0.000
NEUROD2 Taeniopygia guttata ENSTGUG00000016747 I 0.000
NEUROD2 Tetraodon nigroviridis ENSTNIG00000011718 I 0.000
NEUROD2 Takifugu rubripes ENSTRUG00000016237 I 0.000
NEUROD2 Tursiops truncatus ENSTTRG00000007210 I 0.000
neurod2 Xenopus tropicalis XB-GENE-1008512 I 0.000
NEUROD4 Anolis carolinensis ENSACAG00000014910 I 0.000
NEUROD4 Bos taurus ENSBTAG00000005626 I 0.000
NEUROD4 Canis familiaris ENSCAFG00000006347 I 0.000
NEUROD4 Callithrix jacchus ENSCJAG00000019123 I 0.000
NEUROD4 Cavia porcellus ENSCPOG00000002913 I 0.000
neurod4 Danio rerio ENSDARG00000003469 I 0.000
NEUROD4 Dasypus novemcinctus ENSDNOG00000009650 I 0.000
NEUROD4 Equus caballus ENSECAG00000001002 I 0.000
NEUROD4 Echinops telfairi ENSETEG00000009519 I 0.000
NEUROD4 Felis catus ENSFCAG00000013284 I 0.000
NEUROD4 Homo sapiens ENSG00000123307 I 0.000
NEUROD4 Gasterosteus aculeatus ENSGACG00000000702 I 0.000
neurod4 Gasterosteus aculeatus ENSGACG00000008952 I 0.000
NEUROD4 Gorilla gorilla ENSGGOG00000004295 I 0.000
NEUROD4 Loxodonta africana ENSLAFG00000029446 I 0.000
NEUROD4 Meleagris gallopavo ENSMGAG00000005085 I 0.000
NEUROD4 Microcebus murinus ENSMICG00000008491 I 0.000
NEUROD4 Myotis lucifugus ENSMLUG00000028491 I 0.000
Neurod4 Mus musculus ENSMUSG00000048015 I 0.000
NEUROD4 Ornithorhynchus anatinus ENSOANG00000011626 I 0.000
NEUROD4 Otolemur garnettii ENSOGAG00000009685 I 0.000
neurod4 Oryzias latipes ENSORLG00000007467 I 0.000
NEUROD4 Procavia capensis ENSPCAG00000002075 I 0.000
NEUROD4 Pan troglodytes ENSPTRG00000005049 I 0.000
Neurod4 Rattus norvegicus ENSRNOG00000008449 I 0.000
NEUROD4 Tupaia belangeri ENSTBEG00000000432 I 0.000
NEUROD4 Taeniopygia guttata ENSTGUG00000003762 I 0.000
NEUROD4 Tetraodon nigroviridis ENSTNIG00000000015 I 0.000
neurod4 Tetraodon nigroviridis ENSTNIG00000002442 I 0.000
neurod4 Takifugu rubripes ENSTRUG00000013273 I 0.000
NEUROD4 Takifugu rubripes ENSTRUG00000013677 I 0.000
NEUROD4 Tursiops truncatus ENSTTRG00000016039 I 0.000
NEUROD4 Vicugna pacos ENSVPAG00000012065 I 0.000
neurod4 Xenopus tropicalis XB-GENE-972704 I 0.000
neurod4.L Xenopus laevis XB-GENE-972708 I 0.000
NEUROD6 Anolis carolinensis ENSACAG00000009699 I 0.000
NEUROD6 Bos taurus ENSBTAG00000000558 I 0.000
NEUROD6 Canis familiaris ENSCAFG00000003122 I 0.000
NEUROD6 Callithrix jacchus ENSCJAG00000008997 I 0.000
NEUROD6 Cavia porcellus ENSCPOG00000006406 I 0.000
NEUROD6 Dasypus novemcinctus ENSDNOG00000014272 I 0.000
NEUROD6 Equus caballus ENSECAG00000020776 I 0.000
NEUROD6 Erinaceus europaeus ENSEEUG00000007073 I 0.000
NEUROD6 Felis catus ENSFCAG00000026161 I 0.000
NEUROD6 Homo sapiens ENSG00000164600 I 0.000
NEUROD6 Gorilla gorilla ENSGGOG00000026908 I 0.000
NEUROD6 Loxodonta africana ENSLAFG00000018034 I 0.000
NEUROD6 Meleagris gallopavo ENSMGAG00000012144 I 0.000
NEUROD6 Microcebus murinus ENSMICG00000012974 I 0.000
NEUROD6 Myotis lucifugus ENSMLUG00000017761 I 0.000
NEUROD6 Macaca mulatta ENSMMUG00000022699 I 0.000
NEUROD6 Monodelphis domestica ENSMODG00000013299 I 0.000
Neurod6 Mus musculus ENSMUSG00000037984 I 0.000
NEUROD6 Ornithorhynchus anatinus ENSOANG00000011606 I 0.000
NEUROD6 Otolemur garnettii ENSOGAG00000001911 I 0.000
NEUROD6 Ochotona princeps ENSOPRG00000006565 I 0.000
NEUROD6 Procavia capensis ENSPCAG00000005309 I 0.000
NEUROD6 Pan troglodytes ENSPTRG00000019050 I 0.000
NEUROD6 Pteropus vampyrus ENSPVAG00000014789 I 0.000
Neurod6 Rattus norvegicus ENSRNOG00000026055 I 0.000
NEUROD6 Tupaia belangeri ENSTBEG00000013747 I 0.000
NEUROD6 Taeniopygia guttata ENSTGUG00000001910 I 0.000
NEUROD6 Tursiops truncatus ENSTTRG00000000347 I 0.000
neurod6 Xenopus tropicalis XB-GENE-969227 I 0.000
neurod6.L Xenopus laevis XB-GENE-969232 I 0.000
neurod6a Danio rerio ENSDARG00000040008 I 0.000
neurod6b Danio rerio ENSDARG00000020794 I 0.000
neurod6b Gasterosteus aculeatus ENSGACG00000017176 I 0.000
neurod6b Oryzias latipes ENSORLG00000017789 I 0.000
neurod6b Tetraodon nigroviridis ENSTNIG00000018633 I 0.000
neurod6b Takifugu rubripes ENSTRUG00000000001 I 0.000
neurod6b Takifugu rubripes ENSTRUG00000012378 I 0.000
Ocbimv22021915m.g Octopus bimaculoides Ocbimv22021915m.g I 0.000
Ogr05448 Ophisaurus gracilis Ogr05448 I 0.000
Ogr07339 Ophisaurus gracilis Ogr07339 I 0.000
Ogr14107 Ophisaurus gracilis Ogr14107 I 0.000
Ogr16176 Ophisaurus gracilis Ogr16176 I 0.000
Pvit_05839 Pogona vitticeps Pvit_05839 I 0.000
Pvit_07639 Pogona vitticeps Pvit_07639 I 0.000
Pvit_17470 Pogona vitticeps Pvit_17470 I 0.000
Sakowv30011934m.g Saccoglossus kowalevskii Sakowv30011934m.g I 0.000
SMAR012298 Strigamia maritima SMAR012298 I 0.000
SPU_024918 Strongylocentrotus purpuratus SPU_024918 I 0.000
Tal_R006127 Tyto alba Tal_R006127 I 0.000