Sb10g008120 (Sorghum bicolor)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 Sb10g008120 T320790_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RKD2
M07249_2.00 		Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN
NDRGAAGHYGAANVGWCDN		 Dap-seq
OMalley et al.(2016)
RKD2_col_a 		0.755 0.755
RKD2
M07250_2.00 		Arabidopsis thaliana
GWCBBTTCRDMTTCC
GGAAKHYGAAVVGWC		 Dap-seq
OMalley et al.(2016)
RKD2_colamp_a 		0.755 0.755
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb10g008120.1 RWP-RK 125 173

Links

Other RWP-RK family TFs
Other Sorghum bicolor TFs

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000297301 Angiostrongylus cantonensis ACAC_0000297301 I 0.000
ANCCAN_12400 Ancylostoma caninum ANCCAN_12400 I 0.000
CBG03381 Caenorhabditis briggsae CBG03381 I 0.000
CJA18545 Caenorhabditis japonica CJA18545 I 0.000
CRE30013 Caenorhabditis remanei CRE30013 I 0.000
CRE30014 Caenorhabditis remanei CRE30014 I 0.000
dmd-9 Caenorhabditis elegans WBGene00022060 D 0.000
Hba_03543 Heterorhabditis bacteriophora Hba_03543 I 0.000
HCOI00493000 Haemonchus contortus HCOI00493000 I 0.000
HPBE_0000455001 Heligmosomoides bakeri HPBE_0000455001 I 0.000
HPLM_0000698001 Haemonchus placei HPLM_0000698001 I 0.000
NBR_0000615901 Nippostrongylus brasiliensis NBR_0000615901 I 0.000
NECAME_02595 Necator americanus NECAME_02595 I 0.000
SVUK_0000682301 Strongylus vulgaris SVUK_0000682301 I 0.000