chr1.CM0033.550.nc (Lotus japonicus)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04689 (S1FA) IPR006779 chr1.CM0033.550.nc T321533_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
S1FA3
M07252_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
AT3G09735_col_a 		0.773 0.773
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.CM0033.550.nc S1FA 24 89

Links

Other S1FA family TFs
Other Lotus japonicus TFs

97 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CaO19.1499 Candida albicans CaO19.1499 N 0.000
CaO19.9075 Candida albicans CaO19.9075 N 0.000
CD36_16710 Candida dubliniensis CD36_16710 N 0.000
CLUG_02329 Clavispora lusitaniae CLUG_02329 N 0.000
CLUG_02329 Candida lusitaniae CLUG_02329 N 0.000
CORT_0A09500 Candida orthopsilosis CORT_0A09500 N 0.000
CPAG_03070 Candida parapsilosis CPAG_03070 N 0.000
CTRG_01280 Candida tropicalis CTRG_01280 N 0.000
DEHA2B04070g Debaryomyces hansenii DEHA2B04070g N 0.000
e_gww1.3.1.128.1 Pichia stipitis e_gww1.3.1.128.1 N 0.000
G210_2898 Candida maltosa G210_2898 N 0.000
GNLVRS01_PISO0A07920g Millerozyma farinosa GNLVRS01_PISO0A07920g N 0.000
GNLVRS01_PISO0B07987g Millerozyma farinosa GNLVRS01_PISO0B07987g N 0.000
LELG_00946 Lodderomyces elongisporus LELG_00946 N 0.000
PAS_chr1-3_0274 Komagataella pastoris PAS_chr1-3_0274 N 0.000
PGUG_03166 Meyerozyma guilliermondii PGUG_03166 N 0.000
PGUG_03166 Candida guilliermondii PGUG_03166 N 0.000
PGUG_03167 Meyerozyma guilliermondii PGUG_03167 N 0.000
PICST_57681 Scheffersomyces stipitis PICST_57681 N 0.000
SPAPADRAFT_136216 Spathaspora passalidarum SPAPADRAFT_136216 N 0.000
XP_002489620.1 Pichia pastoris XP_002489620.1 N 0.000