ENSPPYG00000011242 (Pongo abelii)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 ENSPPYG00000011242 T321872_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gmeb2
M00824_2.00 		Mus musculus
NNACGYNN
NNRCGTNN		 PBM
Weirauch et al.(2013)
pTH3084 		0.994 1.000
GMEB2
M03471_2.00 		Homo sapiens
YBACGYAM
KTRCGTVR		 SELEX
Jolma et al.(2013)
GMEB2_1 		0.994 1.000
GMEB2
M03472_2.00 		Homo sapiens
WACGTGSTYACGYW
WRCGTRASCACGTW		 SELEX
Jolma et al.(2013)
GMEB2_2 		0.994 1.000
GMEB2
M03473_2.00 		Homo sapiens
YACGTAACBBACGYA
TRCGTVVGTTACGTR		 SELEX
Jolma et al.(2013)
GMEB2_3 		0.994 1.000
GMEB2
M03474_2.00 		Homo sapiens
BKACGTAM
KTACGTMV		 SELEX
Jolma et al.(2013)
GMEB2_4 		0.994 1.000
GMEB2
M05735_2.00 		Homo sapiens
BYACGTAVSBTACGTRV
BYACGTAVSBTACGTRV		 SELEX
Yin et al.(2017)
GMEB2_eDBD_HT-SELEX 		0.994 1.000
GMEB2
M05736_2.00 		Homo sapiens
BBACGYAMVBNACGYVV
BBRCGTNVBKTRCGTVV		 SELEX
Yin et al.(2017)
GMEB2_eDBD_Methyl-HT-SELEX 		0.994 1.000
GMEB2
M02458_2.00 		Anolis carolinensis
NNACGYANN
NNTRCGTNN		 PBM
Weirauch et al.(2014)
pTH9219 		0.992 0.947
GMEB2
M02462_2.00 		Meleagris gallopavo
BBACGYH
DRCGTVV		 PBM
Weirauch et al.(2014)
pTH9211 		0.992 0.933
GMEB1
M02461_2.00 		Meleagris gallopavo
NNACGYNNN
NNNRCGTNN		 PBM
Weirauch et al.(2014)
pTH8318 		0.986 0.747
ENSMODG00000010947
M02463_2.00 		Monodelphis domestica
NNRCGYN
NRCGYNN		 PBM
Weirauch et al.(2014)
pTH8671 		0.986 0.747
GMEB1
M02460_2.00 		Homo sapiens
NNVCGYNNN
NNNRCGBNN		 PBM
Weirauch et al.(2014)
pTH9026 		0.986 0.733
Gmeb1
M00190_2.00 		Mus musculus
NNRCGYNNN
NNNRCGYNN		 PBM
Badis et al.(2009)
Gmeb1_1745 		0.986 0.733
GMEB1
M02465_2.00 		Pteropus vampyrus
NBACGYHN
NDRCGTVN		 PBM
Weirauch et al.(2014)
pTH9282 		0.986 0.733
GMEB1
M05737_2.00 		Homo sapiens
KKACGTAMNKTACGTAM
KTACGTAMNKTACGTMM		 SELEX
Yin et al.(2017)
GMEB1_FL_HT-SELEX 		0.986 0.733
GMEB1
M05738_2.00 		Homo sapiens
KNRCGTVRBBVCGYHN
NDRCGBVVYBACGYNM		 SELEX
Yin et al.(2017)
GMEB1_FL_Methyl-HT-SELEX 		0.986 0.733
gmeb1.S
M02469_2.00 		Xenopus laevis
NKACGTVY
RBACGTMN		 PBM
Weirauch et al.(2014)
pTH9298 		0.981 0.707
gmeb1
M02468_2.00 		Xenopus tropicalis
NNRCGYNNN
NNNRCGYNN		 PBM
Weirauch et al.(2014)
pTH8745 		0.981 0.693
ENSCING00000003435
M02459_2.00 		Ciona intestinalis
NKACGTMVNN
NNBKACGTMN		 PBM
Weirauch et al.(2014)
pTH9356 		0.956 0.627
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000012559 SAND 87 162

Links

Other SAND family TFs
Other Pongo abelii TFs

139 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29588.m000873 Ricinus communis 29588.m000873 I
29848.m004566 Ricinus communis 29848.m004566 I
AMTR_s00019p00232450 Amborella trichopoda AMTR_s00019p00232450 I
AMTR_s00150p00091360 Amborella trichopoda AMTR_s00150p00091360 I
Aquca_016_00154 Aquilegia coerulea Aquca_016_00154 I
BGIOSGA005433 Oryza indica BGIOSGA005433 I
BGIOSGA022427 Oryza indica BGIOSGA022427 I
Bo2g158960 Brassica oleracea Bo2g158960 I
Bo7g096180 Brassica oleracea Bo7g096180 I
Bo9g011440 Brassica oleracea Bo9g011440 I
Bostr.29827s0297 Boechera stricta Bostr.29827s0297 I
Bra009824 Brassica rapa Bra009824 I
Bra020490 Brassica rapa Bra020490 I
Bra036536 Brassica rapa Bra036536 I
BRADI1G47480 Brachypodium distachyon BRADI1G47480 I
BRADI3G54160 Brachypodium distachyon BRADI3G54160 I
Cagra.1945s0014 Capsella grandiflora Cagra.1945s0014 I
Carubv10001796m.g Capsella rubella Carubv10001796m.g I
cassava20662.m1 Manihot esculenta cassava20662.m1 I
cassava38443.m1 Manihot esculenta cassava38443.m1 I
cassava38444.m1 Manihot esculenta cassava38444.m1 I
cassava8560.m1 Manihot esculenta cassava8560.m1 I
Ca_01729 Cicer arietinum Ca_01729 I
Ca_09076 Cicer arietinum Ca_09076 I
Ca_20050 Cicer arietinum Ca_20050 I
chr1.LjT03I11.120.nd Lotus japonicus chr1.LjT03I11.120.nd I
Ciclev10009593m.g Citrus clementina Ciclev10009593m.g I
Ciclev10026602m.g Citrus clementina Ciclev10026602m.g I
Cla006213 Citrullus lanatus Cla006213 I
Cla012931 Citrullus lanatus Cla012931 I
Cla015579 Citrullus lanatus Cla015579 I
Cla021320 Citrullus lanatus Cla021320 I
Cla022694 Citrullus lanatus Cla022694 I
Cla022695 Citrullus lanatus Cla022695 I
Cucsa.096220 Cucumis sativus Cucsa.096220 I
Cucsa.105830 Cucumis sativus Cucsa.105830 I
Cucsa.162710 Cucumis sativus Cucsa.162710 I
Cucsa.162720 Cucumis sativus Cucsa.162720 I
Cucsa.271720 Cucumis sativus Cucsa.271720 I
ERF003 Arabidopsis thaliana AT5G25190 D
estExt_gwp_gw1.C_580005 Physcomitrella patens estExt_gwp_gw1.C_580005 I
Eucgr.C02719 Eucalyptus grandis Eucgr.C02719 I
Eucgr.F03947 Eucalyptus grandis Eucgr.F03947 I
evm.TU.supercontig_10.113 Carica papaya evm.TU.supercontig_10.113 I
evm.TU.supercontig_127.4 Carica papaya evm.TU.supercontig_127.4 I
F775_03622 Aegilops tauschii F775_03622 I
F775_22946 Aegilops tauschii F775_22946 I
fgenesh2_kg.6__2505__AT5G25190.1 Arabidopsis lyrata fgenesh2_kg.6__2505__AT5G25190.1 I
gene15036-v1.0-hybrid Fragaria vesca gene15036-v1.0-hybrid I
gene15940-v1.0-hybrid Fragaria vesca gene15940-v1.0-hybrid I
GLYMA04G06690 Glycine max GLYMA04G06690 I
GLYMA06G06780 Glycine max GLYMA06G06780 I
GLYMA07G02930 Glycine max GLYMA07G02930 I
GLYMA08G23160 Glycine max GLYMA08G23160 I
GLYMA13G44660 Glycine max GLYMA13G44660 I
GLYMA14G13470 Glycine max GLYMA14G13470 I
GLYMA15G00660 Glycine max GLYMA15G00660 I
GLYMA17G33075 Glycine max GLYMA17G33075 I
Gorai.001G036500 Gossypium raimondii Gorai.001G036500 I
Gorai.009G060600 Gossypium raimondii Gorai.009G060600 I
Gorai.009G125100 Gossypium raimondii Gorai.009G125100 I
Gorai.010G117500 Gossypium raimondii Gorai.010G117500 I
Gorai.010G222900 Gossypium raimondii Gorai.010G222900 I
GRMZM2G067463 Zea mays GRMZM2G067463 I
GRMZM2G104260 Zea mays GRMZM2G104260 I
GRMZM2G111415 Zea mays GRMZM2G111415 I
GRMZM2G135452 Zea mays GRMZM2G135452 I
GRMZM2G156006 Zea mays GRMZM2G156006 I
GSMUA_Achr4G02200_001 Musa acuminata GSMUA_Achr4G02200_001 I
GSMUA_Achr5G22840_001 Musa acuminata GSMUA_Achr5G22840_001 I
GSMUA_Achr7G16060_001 Musa acuminata GSMUA_Achr7G16060_001 I
GSMUA_Achr7G19320_001 Musa acuminata GSMUA_Achr7G19320_001 I
GSMUA_Achr9G13760_001 Musa acuminata GSMUA_Achr9G13760_001 I
gw1.21.122.1 Physcomitrella patens gw1.21.122.1 I
LjSGA_107677.3 Lotus japonicus LjSGA_107677.3 I
LPERR02G29600 Leersia perrieri LPERR02G29600 I
LPERR06G04830 Leersia perrieri LPERR06G04830 I
Lus10016815.g Linum usitatissimum Lus10016815.g I
Lus10035859.g Linum usitatissimum Lus10035859.g I
Lus10041614.g Linum usitatissimum Lus10041614.g I
MDP0000127054 Malus domestica MDP0000127054 I
MDP0000243375 Malus domestica MDP0000243375 I
MDP0000279733 Malus domestica MDP0000279733 I
MDP0000297646 Malus domestica MDP0000297646 I
mg019221m Mimulus guttatus mg019221m I
MLOC_55323 Hordeum vulgare MLOC_55323 I
MLOC_6403 Hordeum vulgare MLOC_6403 I
MTR_3g106290 Medicago truncatula MTR_3g106290 I
MTR_4g008860 Medicago truncatula MTR_4g008860 I
OB02G42740 Oryza brachyantha OB02G42740 I
OB04G34960 Oryza brachyantha OB04G34960 I
OB06G14850 Oryza brachyantha OB06G14850 I
OBART02G35950 Oryza barthii OBART02G35950 I
OBART06G05300 Oryza barthii OBART06G05300 I
OGLUM02G37170 Oryza glumaepatula OGLUM02G37170 I
OGLUM06G05450 Oryza glumaepatula OGLUM06G05450 I
OLONG_005458 Oryza longistaminata OLONG_005458 I
OMERI02G33910 Oryza meridionalis OMERI02G33910 I
OMERI06G06320 Oryza meridionalis OMERI06G06320 I
ONIVA02G37990 Oryza nivara ONIVA02G37990 I
ONIVA06G06080 Oryza nivara ONIVA06G06080 I
OPUNC06G05070 Oryza punctata OPUNC06G05070 I
orange1.1g029507m.g Citrus sinensis orange1.1g029507m.g I
orange1.1g030482m.g Citrus sinensis orange1.1g030482m.g I
ORGLA02G0312200 Oryza glaberrima ORGLA02G0312200 I
ORUFI06G05350 Oryza rufipogon ORUFI06G05350 I
OS02G0797100 Oryza sativa OS02G0797100 I
OS06G0181700 Oryza sativa OS06G0181700 I
Pavir.Aa00196 Panicum virgatum Pavir.Aa00196 I
Pavir.Da02059 Panicum virgatum Pavir.Da02059 I
Pavir.Ga00062 Panicum virgatum Pavir.Ga00062 I
Pavir.J12977 Panicum virgatum Pavir.J12977 I
Pavir.J20772 Panicum virgatum Pavir.J20772 I
PDK_20s1355821g002 Phoenix dactylifera PDK_20s1355821g002 I
PGSC0003DMG400014127 Solanum tuberosum PGSC0003DMG400014127 I
PGSC0003DMG400014196 Solanum tuberosum PGSC0003DMG400014196 I
PGSC0003DMG400026136 Solanum tuberosum PGSC0003DMG400026136 I
PGSC0003DMG400028500 Solanum tuberosum PGSC0003DMG400028500 I
PK28394.1 Cannabis sativa PK28394.1 I
Pm005717 Prunus mume Pm005717 I
Pm013752 Prunus mume Pm013752 I
POPTR_0001s14720 Populus trichocarpa POPTR_0001s14720 I
POPTR_0003s17830 Populus trichocarpa POPTR_0003s17830 I
POPTR_0006s27710 Populus trichocarpa POPTR_0006s27710 I
POPTR_0018s02280 Populus trichocarpa POPTR_0018s02280 I
PRUPE_ppa011795mg Prunus persica PRUPE_ppa011795mg I
PRUPE_ppa016477mg Prunus persica PRUPE_ppa016477mg I
SapurV1A.0280s0090 Salix purpurea SapurV1A.0280s0090 I
SapurV1A.0705s0080 Salix purpurea SapurV1A.0705s0080 I
SapurV1A.0730s0010 Salix purpurea SapurV1A.0730s0010 I
SapurV1A.0835s0060 Salix purpurea SapurV1A.0835s0060 I
SapurV1A.2028s0010 Salix purpurea SapurV1A.2028s0010 I
Sb04g036020 Sorghum bicolor Sb04g036020 I
Sb06g031230 Sorghum bicolor Sb06g031230 I
Sb10g005520 Sorghum bicolor Sb10g005520 I
SELMODRAFT_121842 Selaginella moellendorffii SELMODRAFT_121842 I
SELMODRAFT_92334 Selaginella moellendorffii SELMODRAFT_92334 I
Si007359m.g Setaria italica Si007359m.g I
Si018550m.g Setaria italica Si018550m.g I
Si024352m.g Setaria italica Si024352m.g I
Solyc03g117130.2 Solanum lycopersicum Solyc03g117130.2 I
Solyc06g065820.2 Solanum lycopersicum Solyc06g065820.2 I
Solyc06g068360.2 Solanum lycopersicum Solyc06g068360.2 I
TCM_027394 Theobroma cacao TCM_027394 I
TCM_036933 Theobroma cacao TCM_036933 I
Thhalv10004973m.g Eutrema salsugineum Thhalv10004973m.g I
TRAES3BF176500010CFD_g Triticum aestivum TRAES3BF176500010CFD_g I
Traes_2AL_61DB73424 Triticum aestivum Traes_2AL_61DB73424 I
Traes_2BL_5BA37F95E Triticum aestivum Traes_2BL_5BA37F95E I
Traes_2DL_CB03F0D2A Triticum aestivum Traes_2DL_CB03F0D2A I
Traes_6DL_31D678054 Triticum aestivum Traes_6DL_31D678054 I
Traes_7AS_89D49F177 Triticum aestivum Traes_7AS_89D49F177 I
Traes_7DS_433704E8E Triticum aestivum Traes_7DS_433704E8E I
Traes_7DS_433704E8E1 Triticum aestivum Traes_7DS_433704E8E1 I
TRIUR3_25005 Triticum urartu TRIUR3_25005 I
VIT_04s0008g06000 Vitis vinifera VIT_04s0008g06000 I
VIT_09s0002g09120 Vitis vinifera VIT_09s0002g09120 I
VIT_09s0002g09140 Vitis vinifera VIT_09s0002g09140 I